GFIT result for
rsc
|
GFIT result for
rsc
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| rsc:RCFBP_11179 (873 a.a.) |
-- |
K03086 | rpoD | rpoD; RNA polymerase sigma70 factor; K03086 RNA polymerase primary sigma factor | |||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > rsn:RSPO_c01215(873) | 873 | 99.2 | 5453 | 13 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma70 factor; K03086 RNA polymerase primary sigma factor | |
| > rsy:RSUY_12400(873) | 873 | 99.2 | 5453 | 13 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > rsl:RPSI07_1208(876) | 876 | 95.0 | 5258 | 6 | -- | K03086 | rpoD | rpoD; RNA polymerase sigma70 factor; K03086 RNA polymerase primary sigma factor | |
| > rpu:CDC45_11305(828) | 828 | 96.7 | 5049 | 6 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > rnc:GO999_05790(828) | 828 | 96.6 | 5037 | 8 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > rse:F504_2174(819) | 819 | 96.5 | 4980 | 9 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > rsg:JK151_08480(838) | 826 | 95.6 | 4980 | 5 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > rmn:TK49_14525(827) | 829 | 92.4 | 4833 | 16 | <- | K03086 | rpoD | RNA polymerase sigma 70; K03086 RNA polymerase primary sigma factor | |
| > rsm:CMR15_11163(777) | 777 | 97.2 | 4775 | 6 | -- | K03086 | rpoD | rpoD; RNA polymerase sigma70 factor; K03086 RNA polymerase primary sigma factor | |
| > rwe:KOL96_18330(830) | 833 | 90.2 | 4707 | 9 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > rpi:Rpic_2420(829) | 833 | 90.3 | 4695 | 8 | <- | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > rpf:Rpic12D_2027(821) | 824 | 90.7 | 4676 | 9 | <- | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > rso:RSc2215(755) | 755 | 97.0 | 4643 | 8 | <- | K03086 | rpoD | rpoD; probable rna polymerase sigma d (sigma-70) factor transcription regulator protein; K03086 RNA polymerase primary sigma factor | |
| > cpau:EHF44_09980(856) | 885 | 76.8 | 4114 | 13 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > cox:E0W60_22885(847) | 884 | 76.7 | 4085 | 19 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > cuh:BJN34_14680(850) | 851 | 78.5 | 4081 | 16 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > rme:Rmet_2606(855) | 883 | 75.7 | 4066 | 12 | <- | K03086 | rpoD | rpoD1; RNA polymerase sigma D factor (housekeeping sigma factor); K03086 RNA polymerase primary sigma factor | |
| > cuk:KB879_25560(850) | 882 | 76.0 | 4056 | 20 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > reh:H16_A2725(827) | 829 | 79.4 | 4049 | 13 | <- | K03086 | rpoD | rpoD1; DNA-directed RNA polymerase sigma subunit (RpoD); K03086 RNA polymerase primary sigma factor | |
| > rpj:N234_15435(850) | 871 | 76.0 | 4046 | 14 | <- | K03086 | rpoD | RNA polymerase sigma 70; K03086 RNA polymerase primary sigma factor | |
| > cbw:RR42_m3043(827) | 837 | 79.2 | 4030 | 20 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > reu:Reut_A0888(783) | 794 | 81.6 | 4026 | 25 | <- | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > cnan:A2G96_17265(?) | 772 | 83.5 | 4023 | 0 | -- | - | |||
| > rin:ACS15_0956(666) | 667 | 93.4 | 3979 | 5 | -- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > ccup:BKK81_15305(744) | 772 | 83.5 | 3976 | 4 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > cup:BKK80_16255(744) | 772 | 83.5 | 3976 | 4 | -- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > cuu:BKK79_16695(744) | 772 | 83.5 | 3976 | 7 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > cgd:CR3_1956(750) | 771 | 83.8 | 3970 | 11 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > ccax:KZ686_14540(750) | 771 | 83.5 | 3961 | 12 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > cti:RALTA_A2226(683) | 686 | 88.9 | 3841 | 4 | <- | K03086 | rpoD | rpoD1; RNA POLYMERASE SIGMA D (SIGMA-70) FACTOR TRANSCRIPTION REGULATOR PROTEIN; K03086 RNA polymerase primary sigma factor | |
| > ccam:M5D45_12045(684) | 685 | 89.3 | 3830 | 3 | -- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > cnc:CNE_1c26220(684) | 684 | 87.9 | 3814 | 7 | <- | K03086 | rpoD | rpoD2; DNA-directed RNA polymerase sigma subunit RpoD; K03086 RNA polymerase primary sigma factor | |
| > pfib:PI93_012115(789) | 792 | 72.3 | 3562 | 18 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > pfg:AB870_02870(700) | 699 | 79.0 | 3542 | 3 | -- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > ptx:ABW99_02495(659) | 654 | 83.5 | 3541 | 3 | -- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > ppk:U875_08055(691) | 690 | 80.1 | 3524 | 3 | -- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > ppnm:LV28_05550(691) | 690 | 80.1 | 3524 | 3 | -- | K03086 | rpoD | RNA polymerase subunit sigma; K03086 RNA polymerase primary sigma factor | |
| > ppno:DA70_00765(691) | 690 | 80.1 | 3524 | 3 | -- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > prb:X636_01570(691) | 690 | 80.1 | 3524 | 3 | -- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > ppul:RO07_24500(699) | 699 | 79.0 | 3523 | 3 | -- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > pspu:NA29_12205(701) | 699 | 78.7 | 3515 | 3 | -- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > tcar:U0034_27330(?) | 834 | 68.1 | 3513 | 0 | -- | - | |||
| > pnr:AT302_16095(700) | 691 | 79.7 | 3505 | 5 | -- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > papi:SG18_23815(698) | 696 | 78.6 | 3503 | 3 | -- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > pew:KZJ38_35870(800) | 799 | 70.3 | 3499 | 13 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > pve:UC34_15945(676) | 666 | 81.8 | 3499 | 4 | -- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > pand:DRB87_14825(700) | 700 | 79.0 | 3497 | 5 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > pcom:NTU39_17520(701) | 700 | 78.4 | 3497 | 2 | -- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bmj:BMULJ_03703(804) | 826 | 68.6 | 3494 | 47 | <- | rpoD; RNA polymerase primary sigma factor | |||
| > bmu:Bmul_4813(804) | 826 | 68.6 | 3494 | 50 | <- | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > bgd:bgla_2g21200(805) | 826 | 68.6 | 3490 | 19 | <- | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD family protein; K03086 RNA polymerase primary sigma factor | |
| > brh:RBRH_01153(778) | 783 | 71.5 | 3490 | 2 | <- | K03086 | rpoD | RNA polymerase sigma factor rpoD; K03086 RNA polymerase primary sigma factor | |
| > pox:MB84_20810(662) | 656 | 82.3 | 3488 | 3 | -- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bgl:bglu_2g15870(805) | 827 | 68.3 | 3484 | 24 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bam:Bamb_3257(805) | 829 | 68.6 | 3482 | 36 | <- | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > bch:Bcen2424_3886(805) | 800 | 68.9 | 3482 | 29 | <- | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > pmeg:FNZ07_06525(802) | 826 | 68.8 | 3480 | 17 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > para:BTO02_20190(799) | 799 | 70.1 | 3479 | 12 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > burk:DM992_30230(805) | 800 | 69.3 | 3478 | 30 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bpm:BURPS1710b_A0833(800) | 818 | 68.2 | 3477 | 89 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bac:BamMC406_3783(805) | 806 | 69.6 | 3474 | 30 | <- | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > bgp:BGL_2c21380(805) | 804 | 69.3 | 3473 | 23 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor | |
| > bpla:bpln_2g21580(805) | 804 | 69.3 | 3473 | 28 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bte:BTH_II0621(800) | 820 | 68.7 | 3472 | 43 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bvi:Bcep1808_4264(809) | 806 | 69.1 | 3468 | 39 | <- | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > pgp:CUJ91_31075(807) | 813 | 68.6 | 3468 | 10 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > tvl:FAZ95_37355(?) | 828 | 68.1 | 3468 | 0 | -- | - | |||
| > bann:JFN94_22185(805) | 806 | 69.5 | 3467 | 30 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bur:Bcep18194_B2204(808) | 802 | 68.7 | 3462 | 31 | <- | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > pacs:FAZ98_17775(798) | 806 | 68.9 | 3461 | 13 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > pts:CUJ90_24685(799) | 811 | 68.7 | 3459 | 15 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > baen:L3V59_34395(?) | 829 | 68.5 | 3458 | 0 | -- | - | |||
| > bgf:BC1003_4533(803) | 804 | 68.7 | 3455 | 9 | <- | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > pspw:BJG93_20670(796) | 803 | 69.0 | 3455 | 13 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bari:NLX30_33875(805) | 800 | 68.4 | 3454 | 34 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > ptro:G5S35_22580(802) | 809 | 69.3 | 3454 | 16 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bmv:BMASAVP1_1520(736) | 738 | 72.9 | 3453 | 9 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bpl:BURPS1106A_A2384(736) | 738 | 72.9 | 3453 | 9 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bpd:BURPS668_A2525(736) | 738 | 72.8 | 3451 | 11 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > parb:CJU94_29570(800) | 815 | 68.2 | 3447 | 10 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > pacp:FAZ97_21915(802) | 801 | 68.8 | 3446 | 7 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > pbry:NDK50_35105(797) | 802 | 69.3 | 3443 | 5 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > pgis:I6I06_17615(795) | 796 | 69.6 | 3434 | 8 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > pkf:RW095_16445(?) | 802 | 68.3 | 3434 | 0 | -- | - | |||
| > pcj:CUJ87_26830(803) | 812 | 68.2 | 3433 | 11 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > phs:C2L64_31560(799) | 795 | 68.9 | 3428 | 9 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > pter:C2L65_28295(796) | 792 | 68.8 | 3428 | 9 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > hhf:E2K99_04215(850) | 875 | 64.2 | 3420 | 26 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > caba:SBC2_56960(873) | 872 | 64.2 | 3418 | 5 | <- | K03086 | rpoD | rpoD_2; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bhg:I6G56_26350(680) | 684 | 77.3 | 3417 | 4 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bstg:WT74_23770(681) | 687 | 77.1 | 3417 | 4 | <- | K03086 | rpoD | RNA polymerase subunit sigma; K03086 RNA polymerase primary sigma factor | |
| > btd:BTI_5230(680) | 684 | 77.3 | 3417 | 4 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bud:AQ610_28865(680) | 684 | 77.3 | 3417 | 4 | -- | K03086 | rpoD | RNA polymerase subunit sigma; K03086 RNA polymerase primary sigma factor | |
| > bul:BW21_4852(680) | 684 | 77.3 | 3417 | 4 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > buu:WS70_26195(680) | 684 | 77.5 | 3417 | 4 | -- | K03086 | rpoD | RNA polymerase subunit sigma; K03086 RNA polymerase primary sigma factor | |
| > hse:Hsero_0870(850) | 881 | 64.2 | 3415 | 24 | -- | K03086 | rpoD | rpoD; RNA polymerase sigma-70 factor transcription regulator protein; K03086 RNA polymerase primary sigma factor | |
| > hsz:ACP92_04370(850) | 881 | 64.2 | 3415 | 24 | <- | K03086 | rpoD | RNA polymerase sigma 70; K03086 RNA polymerase primary sigma factor | |
| > bmul:NP80_3854(682) | 686 | 77.4 | 3412 | 5 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > hrb:Hrubri_0738(850) | 875 | 64.1 | 3412 | 23 | -- | K03086 | rpoD | rpoD; RNA polymerase sigma-70 factor transcription regulator protein; K03086 RNA polymerase primary sigma factor | |
| > bui:AX768_23275(822) | 832 | 66.3 | 3409 | 5 | <- | K03086 | rpoD | RNA polymerase subunit sigma; K03086 RNA polymerase primary sigma factor | |