KEGG   DISEASE: Juvenile myelomonocytic leukemia
Entry
H02541                      Disease                                
Name
Juvenile myelomonocytic leukemia
  Supergrp
Myelodysplastic/myeloproliferative neoplasms [DS:H02410]
Description
Juvenile myelomonocytic leukemia (JMML) is a rare clonal hematopoietic disorder of early childhood with features characteristic of both myelodysplastic and myeloproliferative disorders. Recent studies have shown that abnormal proliferation is due to aberrant signal transduction resulting from mutations in components of the RAS-signaling pathway.
Category
Cancer
Brite
Human diseases in ICD-11 classification [BR:br08403]
 02 Neoplasms
  Neoplasms of haematopoietic or lymphoid tissues
   Myelodysplastic and myeloproliferative neoplasms
    2A42  Juvenile myelomonocytic leukaemia
     H02541  Juvenile myelomonocytic leukemia
Pathway-based classification of diseases [BR:br08402]
 Signal transduction
  nt06526  MAPK signaling
   H02541  Juvenile myelomonocytic leukemia
 Cellular process
  nt06546  IgSF CAM signaling
   H02541  Juvenile myelomonocytic leukemia
Pathway
hsa04010  MAPK signaling pathway
hsa04014  Ras signaling pathway
hsa04517  IGSF CAM signaling
Network
nt06526 MAPK signaling
nt06546 IgSF CAM signaling
Gene
PTPN11 [HSA:5781] [KO:K07293]
ARHGAP26 [HSA:23092] [KO:K20071]
CBL [HSA:867] [KO:K04707]
NF1 [HSA:4763] [KO:K08052]
NRAS [HSA:4893] [KO:K07828]
KRAS [HSA:3845] [KO:K07827]
Other DBs
ICD-11: 2A42
MeSH: D054429
OMIM: 607785
Reference
  Authors
Niemeyer CM
  Title
JMML genomics and decisions.
  Journal
Hematology Am Soc Hematol Educ Program 2018:307-312 (2018)
DOI:10.1182/asheducation-2018.1.307
Reference
  Authors
Proytcheva M
  Title
Juvenile myelomonocytic leukemia.
  Journal
Semin Diagn Pathol 28:298-303 (2011)
DOI:10.1053/j.semdp.2011.08.007
Reference
  Authors
Borkhardt A, Bojesen S, Haas OA, Fuchs U, Bartelheimer D, Loncarevic IF, Bohle RM, Harbott J, Repp R, Jaeger U, Viehmann S, Henn T, Korth P, Scharr D, Lampert F
  Title
The human GRAF gene is fused to MLL in a unique t(5;11)(q31;q23) and both alleles are disrupted in three cases of myelodysplastic syndrome/acute myeloid leukemia with a deletion 5q.
  Journal
Proc Natl Acad Sci U S A 97:9168-73 (2000)
DOI:10.1073/pnas.150079597
LinkDB

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KEGG   DISEASE: Neurofibromatosis type 1
Entry
H01437                      Disease                                
Name
Neurofibromatosis type 1;
Von Recklinghausen disease
  Subgroup
Familial spinal neurofibromatosis
Watson syndrome [DS:H02188]
Legius syndrome [DS:H01986]
Neurofibromatosis-Noonan syndrome [DS:H02189]
Description
Neurofibromatosis type 1 (NF1), also known as von Recklinghausen's disease, is an autosomal dominant disease caused by mutations of NF1 gene on chromosome 17. The NF1 gene encodes a RAS GTPase-activating protein called neurofibromin. It is one of the most frequent human genetic diseases, with a prevalence of one case in 3000 births and there is no sex or racial predilection. NF1 is characterized by multiple cafe-au-lait spots, axillary and inguinal freckling, multiple cutaneous neurofibromas, and iris Lisch nodules. Learning disabilities are present in at least 50% of individuals with NF1. Less common but potentially more serious manifestations include plexiform neurofibromas, optic nerve and other central nervous system gliomas, malignant peripheral nerve sheath tumors, scoliosis, tibial dysplasia, and vasculopathy.
Category
Congenital malformation
Brite
Human diseases in ICD-11 classification [BR:br08403]
 20 Developmental anomalies
  Multiple developmental anomalies or syndromes
   LD2D  Phakomatoses or hamartoneoplastic syndromes
    H01437  Neurofibromatosis type 1
Pathway-based classification of diseases [BR:br08402]
 Signal transduction
  nt06526  MAPK signaling
   H01437  Neurofibromatosis type 1
Pathway
hsa04010  MAPK signaling pathway
Network
nt06526 MAPK signaling
Gene
NF1 [HSA:4763] [KO:K08052]
Drug
Selumetinib sulfate [DR:D10024]
Mirdametinib [DR:D11675]
Other DBs
ICD-11: LD2D.10
MeSH: D009456
OMIM: 162200 162210
Reference
  Authors
Williams VC, Lucas J, Babcock MA, Gutmann DH, Korf B, Maria BL
  Title
Neurofibromatosis type 1 revisited.
  Journal
Pediatrics 123:124-33 (2009)
DOI:10.1542/peds.2007-3204
Reference
  Authors
Ghalayani P, Saberi Z, Sardari F
  Title
Neurofibromatosis type I (von Recklinghausen's disease): A family case report and literature review.
  Journal
Dent Res J (Isfahan) 9:483-8 (2012)
Reference
  Authors
Friedman JM
  Title
Neurofibromatosis 1
  Journal
GeneReviews (1993)
LinkDB

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KEGG   DISEASE: Malignant paraganglioma
Entry
H01510                      Disease                                
Name
Malignant paraganglioma;
Pheochromocytoma
  Supergrp
Paraganglioma [DS:H02538]
Description
Paragangliomas (PGLs) are rare neuroendocrine tumors that arise in sympathetic and parasympathetic paraganglia and derive from neural crest cells. Malignancy is defined by presence of metastases, tumor spread in sites where chromaffin tissue is normally absent such as lymph nodes, liver, lungs, and bones. Malignant PGLs are extremely rare. The pathogenesis and progression of PGLs are very strongly influenced by genetics. A germline mutation in one of the susceptibility genes identified so far explains ~40% of all cases; the remaining 60% are thought to be sporadic cases. Sporadic as well as hereditary PGLs have been divided in two main clusters linked to two different signalling pathways: the first cluster contains all VHL-, SDHx-, and FH- mutated tumors and is associated to the activation of hypoxic pathway, while the second cluster contains all RET- , NF1-, MAX and TMEM127- mutated tumors and is associated to the activation of MAPK and mTOR (mammalian target of rapamycin) signaling pathways.
Category
Cancer
Brite
Human diseases in ICD-11 classification [BR:br08403]
 02 Neoplasms
  Malignant neoplasms, except primary neoplasms of lymphoid, haematopoietic, central nervous system or related tissues
   Malignant neoplasms, stated or presumed to be primary, of specified sites, except of lymphoid, haematopoietic, central nervous system or related tissues
    Malignant neoplasms of endocrine glands
     2D12  Malignant neoplasms of other endocrine glands or related structures
      H01510  Malignant paraganglioma
Pathway-based classification of diseases [BR:br08402]
 Signal transduction
  nt06526  MAPK signaling
   H01510  Malignant paraganglioma
 Cellular process
  nt06523  Epigenetic regulation by Polycomb complexes
   H01510  Malignant paraganglioma
Pathway
hsa04010  MAPK signaling pathway
Network
nt06523 Epigenetic regulation by Polycomb complexes
nt06526 MAPK signaling
Gene
SDHD [HSA:6392] [KO:K00237]
SDHB [HSA:6390] [KO:K00235]
SDHC [HSA:6391] [KO:K00236]
NF1 [HSA:4763] [KO:K08052]
RET [HSA:5979] [KO:K05126]
VHL [HSA:7428] [KO:K03871]
TMEM127 [HSA:55654] [KO:K25206]
MAX [HSA:4149] [KO:K04453]
KIF1B [HSA:23095] [KO:K10392]
EPAS1 [HSA:2034] [KO:K09095]
FH [HSA:2271] [KO:K01679]
Other DBs
ICD-11: 2D12
MeSH: D010235
OMIM: 171300
Reference
  Authors
Favier J, Amar L, Gimenez-Roqueplo AP
  Title
Paraganglioma and phaeochromocytoma: from genetics to personalized medicine.
  Journal
Nat Rev Endocrinol 11:101-11 (2015)
DOI:10.1038/nrendo.2014.188
Reference
  Authors
Baysal BE
  Title
Clinical and molecular progress in hereditary paraganglioma.
  Journal
J Med Genet 45:689-94 (2008)
DOI:10.1136/jmg.2008.058560
Reference
  Authors
Martin TP, Irving RM, Maher ER
  Title
The genetics of paragangliomas: a review.
  Journal
Clin Otolaryngol 32:7-11 (2007)
DOI:10.1111/j.1365-2273.2007.01378.x
Reference
  Authors
Baudin E, Habra MA, Deschamps F, Cote G, Dumont F, Cabanillas M, Arfi-Roufe J, Berdelou A, Moon B, Al Ghuzlan A, Patel S, Leboulleux S, Jimenez C
  Title
Therapy of endocrine disease: treatment of malignant pheochromocytoma and paraganglioma.
  Journal
Eur J Endocrinol 171:R111-22 (2014)
DOI:10.1530/EJE-14-0113
Reference
  Authors
Parenti G, Zampetti B, Rapizzi E, Ercolino T, Giache V, Mannelli M
  Title
Updated and new perspectives on diagnosis, prognosis, and therapy of malignant pheochromocytoma/paraganglioma.
  Journal
J Oncol 2012:872713 (2012)
DOI:10.1155/2012/872713
Reference
  Authors
Chrisoulidou A, Kaltsas G, Ilias I, Grossman AB
  Title
The diagnosis and management of malignant phaeochromocytoma and paraganglioma.
  Journal
Endocr Relat Cancer 14:569-85 (2007)
DOI:10.1677/ERC-07-0074
Reference
  Authors
Pillai S, Gopalan V, Smith RA, Lam AK
  Title
Updates on the genetics and the clinical impacts on phaeochromocytoma and paraganglioma in the new era.
  Journal
Crit Rev Oncol Hematol 100:190-208 (2016)
DOI:10.1016/j.critrevonc.2016.01.022
LinkDB

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KEGG   DISEASE: Neurofibromatosis-Noonan syndrome
Entry
H02189                      Disease                                
Name
Neurofibromatosis-Noonan syndrome
  Supergrp
Noonan syndrome and related disorders [DS:H00523]
Neurofibromatosis type 1 [DS:H01437]
Description
Neurofibromatosis-Noonan syndrome (NFNS) presents combined characteristics of both autosomal dominant disorders, neurofibromatosis type 1 (NF1) and Noonan syndrome (NS). NF1 is characterized by neurofibromas, cafe-au-lait spots, osseous lesions, and brain tumors such as gliomas. NS presents characteristic facial appearance, short stature, hypertelorism, strabismus, and low-set ears. It has been reported that mutations in the NF1 gene are associated with NFNS.
Category
Congenital malformation
Brite
Human diseases in ICD-11 classification [BR:br08403]
 20 Developmental anomalies
  Multiple developmental anomalies or syndromes
   LD27  Syndromes with skin or mucosal anomalies as a major feature
    H02189  Neurofibromatosis-Noonan syndrome
Pathway-based classification of diseases [BR:br08402]
 Signal transduction
  nt06526  MAPK signaling
   H02189  Neurofibromatosis-Noonan syndrome
Pathway
hsa04010  MAPK signaling pathway
Network
nt06526 MAPK signaling
Gene
NF1 [HSA:4763] [KO:K08052]
Other DBs
ICD-11: LD27.5
MeSH: C537393
OMIM: 601321
Reference
  Authors
Yapijakis C, Pachis N, Natsis S, Voumvourakis C
  Title
Is Neurofibromatosis Type 1-Noonan Syndrome a Phenotypic Result of Combined Genetic and Epigenetic Factors?
  Journal
In Vivo 30:315-20 (2016)
Reference
  Authors
Baralle D, Mattocks C, Kalidas K, Elmslie F, Whittaker J, Lees M, Ragge N, Patton MA, Winter RM, ffrench-Constant C
  Title
Different mutations in the NF1 gene are associated with Neurofibromatosis-Noonan syndrome (NFNS).
  Journal
Am J Med Genet A 119A:1-8 (2003)
DOI:10.1002/ajmg.a.20023
LinkDB

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KEGG   DISEASE: Watson syndrome
Entry
H02188                      Disease                                
Name
Watson syndrome;
Pulmonary valvular stenosis with cafe au lait spots
  Supergrp
Neurofibromatosis type 1 [DS:H01437]
Description
Watson syndrome (WTSN) is an autosomal dominant condition characterized by the presence of pulmonary valvular stenosis, cafe au lait spots, and mild mental retardation. These features are also sometimes observed in neurofibromatosis type 1 (NF1). It has been suggested that Watson syndrome is caused by mutations in NF1 gene.
Category
Congenital malformation
Brite
Human diseases in ICD-11 classification [BR:br08403]
 14 Diseases of the skin
  Genetic and developmental disorders affecting the skin
   EC23  Genetic disorders of skin pigmentation
    H02188  Watson syndrome
Pathway-based classification of diseases [BR:br08402]
 Signal transduction
  nt06526  MAPK signaling
   H02188  Watson syndrome
Pathway
hsa04010  MAPK signaling pathway
Network
nt06526 MAPK signaling
Gene
NF1 [HSA:4763] [KO:K08052]
Other DBs
ICD-11: EC23.1
MeSH: D009456
OMIM: 193520
Reference
PMID:1770531
  Authors
Allanson JE, Upadhyaya M, Watson GH, Partington M, MacKenzie A, Lahey D, MacLeod H, Sarfarazi M, Broadhead W, Harper PS, et al.
  Title
Watson syndrome: is it a subtype of type 1 neurofibromatosis?
  Journal
J Med Genet 28:752-6 (1991)
DOI:10.1136/jmg.28.11.752
Reference
PMID:8317503
  Authors
Tassabehji M, Strachan T, Sharland M, Colley A, Donnai D, Harris R, Thakker N
  Title
Tandem duplication within a neurofibromatosis type 1 (NF1) gene exon in a family with features of Watson syndrome and Noonan syndrome.
  Journal
Am J Hum Genet 53:90-5 (1993)
LinkDB

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