KEGG   PATHWAY: afb00010
Entry
afb00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Anoplopoma fimbria (sablefish)
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
afb00010  Glycolysis / Gluconeogenesis
afb00010

Module
afb_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:afb00010]
afb_M00002  Glycolysis, core module involving three-carbon compounds [PATH:afb00010]
afb_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:afb00010]
afb_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:afb00010]
Other DBs
GO: 0006096 0006094
Organism
Anoplopoma fimbria (sablefish) [GN:afb]
Gene
129099353  hexokinase HKDC1-like isoform X1 [KO:K00844] [EC:2.7.1.1]
129099363  hk1; hexokinase-1 [KO:K00844] [EC:2.7.1.1]
129101752  hk2; hexokinase-2 isoform X1 [KO:K00844] [EC:2.7.1.1]
129113227  hexokinase-4-like [KO:K00844] [EC:2.7.1.1]
129096426  hexokinase-1-like [KO:K00844] [EC:2.7.1.1]
129101072  gck; hexokinase-4 [KO:K12407] [EC:2.7.1.2]
129099872  gpib; glucose-6-phosphate isomerase b [KO:K01810] [EC:5.3.1.9]
129107943  gpia; glucose-6-phosphate isomerase a [KO:K01810] [EC:5.3.1.9]
129099382  pfkma; phosphofructokinase, muscle a [KO:K00850] [EC:2.7.1.11]
129105029  pfkla; ATP-dependent 6-phosphofructokinase, liver type [KO:K00850] [EC:2.7.1.11]
129110455  pfkpa; ATP-dependent 6-phosphofructokinase, platelet type isoform X1 [KO:K00850] [EC:2.7.1.11]
129106485  pfkmb; phosphofructokinase, muscle b isoform X1 [KO:K00850] [EC:2.7.1.11]
129116238  ATP-dependent 6-phosphofructokinase, platelet type-like isoform X1 [KO:K00850] [EC:2.7.1.11]
129100946  fructose-1,6-bisphosphatase 1-like [KO:K03841] [EC:3.1.3.11]
129101208  fbp2; fructose-1,6-bisphosphatase isozyme 2 [KO:K03841] [EC:3.1.3.11]
129102098  fructose-1,6-bisphosphatase 1-like [KO:K03841] [EC:3.1.3.11]
129105499  aldoca; LOW QUALITY PROTEIN: fructose-bisphosphate aldolase C-A [KO:K01623] [EC:4.1.2.13]
129090301  aldob; fructose-bisphosphate aldolase B [KO:K01623] [EC:4.1.2.13]
129091028  aldoab; aldolase a, fructose-bisphosphate, b [KO:K01623] [EC:4.1.2.13]
129113129  aldocb; fructose-bisphosphate aldolase C-B [KO:K01623] [EC:4.1.2.13]
129097892  fructose-bisphosphate aldolase A-like [KO:K01623] [EC:4.1.2.13]
129109571  tpi1b; triosephosphate isomerase B [KO:K01803] [EC:5.3.1.1]
129096921  triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
129109555  gapdh; glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
129096948  glyceraldehyde-3-phosphate dehydrogenase-like [KO:K00134] [EC:1.2.1.12]
129109116  gapdhs; glyceraldehyde-3-phosphate dehydrogenase 2 [KO:K10705] [EC:1.2.1.12]
129113198  pgk1; phosphoglycerate kinase 1 [KO:K00927] [EC:2.7.2.3]
129095693  pgam1b; phosphoglycerate mutase 1b [KO:K01834] [EC:5.4.2.11]
129102643  pgam2; phosphoglycerate mutase 2 [KO:K01834] [EC:5.4.2.11]
129092143  LOW QUALITY PROTEIN: phosphoglycerate mutase 1-like [KO:K01834] [EC:5.4.2.11]
129099549  eno1a; enolase 1a, (alpha) [KO:K01689] [EC:4.2.1.11]
129109552  gamma-enolase-like [KO:K01689] [EC:4.2.1.11]
129105245  eno1b; enolase 1b, (alpha) [KO:K01689] [EC:4.2.1.11]
129096881  gamma-enolase [KO:K01689] [EC:4.2.1.11]
129093696  eno3; beta-enolase [KO:K01689] [EC:4.2.1.11]
129092788  eno4; enolase 4 [KO:K27394] [EC:4.2.1.11]
129110286  pklr; pyruvate kinase PKLR isoform X1 [KO:K00873] [EC:2.7.1.40]
129101317  pkma; pyruvate kinase PKM isoform X1 [KO:K00873] [EC:2.7.1.40]
129108196  pkmb; pyruvate kinase M1/2b [KO:K00873] [EC:2.7.1.40]
129110563  pdha1b; pyruvate dehydrogenase E1 subunit alpha 1b isoform X1 [KO:K00161] [EC:1.2.4.1]
129113046  pdha1a; pyruvate dehydrogenase E1 subunit alpha 1a [KO:K00161] [EC:1.2.4.1]
129106425  pdhb; pyruvate dehydrogenase E1 component subunit beta, mitochondrial [KO:K00162] [EC:1.2.4.1]
129113196  dlat; dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial [KO:K00627] [EC:2.3.1.12]
129108186  dldh; dihydrolipoyl dehydrogenase, mitochondrial [KO:K00382] [EC:1.8.1.4]
129112297  ldhba; L-lactate dehydrogenase B-A chain isoform X1 [KO:K00016] [EC:1.1.1.27]
129107850  L-lactate dehydrogenase C chain isoform X1 [KO:K00016] [EC:1.1.1.27]
129107954  ldha; L-lactate dehydrogenase A chain [KO:K00016] [EC:1.1.1.27]
129090584  alcohol dehydrogenase class-3 [KO:K00121] [EC:1.1.1.284 1.1.1.1]
129090585  alcohol dehydrogenase class-3-like [KO:K00121] [EC:1.1.1.284 1.1.1.1]
129102985  alcohol dehydrogenase 1-like isoform X1 [KO:K00121] [EC:1.1.1.284 1.1.1.1]
129102986  alcohol dehydrogenase 1-like [KO:K00121] [EC:1.1.1.284 1.1.1.1]
129103070  alcohol dehydrogenase class-3 chain L [KO:K00121] [EC:1.1.1.284 1.1.1.1]
129103125  alcohol dehydrogenase 1-like [KO:K00121] [EC:1.1.1.284 1.1.1.1]
129103445  alcohol dehydrogenase 1-like [KO:K00121] [EC:1.1.1.284 1.1.1.1]
129101819  akr1a1a; aldo-keto reductase family 1 member A1-A [KO:K00002] [EC:1.1.1.2]
129094255  akr1a1b; aldo-keto reductase family 1 member A1-B [KO:K00002] [EC:1.1.1.2]
129109459  LOW QUALITY PROTEIN: aldehyde dehydrogenase, mitochondrial-like [KO:K00128] [EC:1.2.1.3]
129113216  aldh3a2b; aldehyde dehydrogenase family 3 member A2b [KO:K00128] [EC:1.2.1.3]
129093248  aldh3a1; aldehyde dehydrogenase, dimeric NADP-preferring [KO:K00128] [EC:1.2.1.3]
129098387  aldh16a1; aldehyde dehydrogenase family 16 member A1 [KO:K00128] [EC:1.2.1.3]
129093424  aldehyde dehydrogenase family 3 member A2-like isoform X1 [KO:K00128] [EC:1.2.1.3]
129094493  aldh7a1; alpha-aminoadipic semialdehyde dehydrogenase [KO:K14085] [EC:1.2.1.31 1.2.1.8 1.2.1.3]
129112635  aldh9a1b; LOW QUALITY PROTEIN: 4-trimethylaminobutyraldehyde dehydrogenase B [KO:K00149] [EC:1.2.1.47 1.2.1.3]
129094263  aldh9a1a.1; 4-trimethylaminobutyraldehyde dehydrogenase A [KO:K00149] [EC:1.2.1.47 1.2.1.3]
129101678  aldh3b2; aldehyde dehydrogenase family 3 member B1 [KO:K00129] [EC:1.2.1.5]
129099140  aldh3b1; aldehyde dehydrogenase family 3 member B1 [KO:K00129] [EC:1.2.1.5]
129100335  acetyl-coenzyme A synthetase, cytoplasmic-like isoform X1 [KO:K01895] [EC:6.2.1.1]
129106819  acetyl-coenzyme A synthetase 2-like, mitochondrial [KO:K01895] [EC:6.2.1.1]
129091912  LOW QUALITY PROTEIN: acetyl-coenzyme A synthetase 2-like, mitochondrial [KO:K01895] [EC:6.2.1.1]
129088921  acss2l; acyl-CoA synthetase short chain family member 2 like [KO:K01895] [EC:6.2.1.1]
129092243  galm; aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
129094601  pgm1; phosphoglucomutase-1 [KO:K01835] [EC:5.4.2.2]
129114034  phosphoglucomutase-1-like [KO:K01835] [EC:5.4.2.2]
129095823  pgm2; phosphoglucomutase-2 [KO:K15779] [EC:5.4.2.2 5.4.2.7]
129090916  g6pc1a.2; glucose-6-phosphatase catalytic subunit 1 [KO:K01084] [EC:3.1.3.9]
129090917  g6pc1a.1; glucose-6-phosphatase a, catalytic subunit, tandem duplicate 1 [KO:K01084] [EC:3.1.3.9]
129091410  g6pc3; glucose-6-phosphatase 3 [KO:K01084] [EC:3.1.3.9]
129099437  adpgk2; ADP-dependent glucokinase [KO:K08074] [EC:2.7.1.147]
129107745  adpgk; ADP-dependent glucokinase isoform X1 [KO:K08074] [EC:2.7.1.147]
129108357  bpgm; bisphosphoglycerate mutase [KO:K01837] [EC:5.4.2.4 5.4.2.11]
129091439  minpp1b; multiple inositol polyphosphate phosphatase 1b [KO:K03103] [EC:3.1.3.62 3.1.3.80]
129092499  minpp1a; multiple inositol polyphosphate phosphatase 1a [KO:K03103] [EC:3.1.3.62 3.1.3.80]
129092500  multiple inositol polyphosphate phosphatase 1-like [KO:K03103] [EC:3.1.3.62 3.1.3.80]
129105744  pck1; phosphoenolpyruvate carboxykinase, cytosolic [GTP] [KO:K01596] [EC:4.1.1.32]
129110756  phosphoenolpyruvate carboxykinase, cytosolic [GTP]-like [KO:K01596] [EC:4.1.1.32]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
afb00020  Citrate cycle (TCA cycle)
afb00030  Pentose phosphate pathway
afb00500  Starch and sucrose metabolism
afb00620  Pyruvate metabolism
afb00640  Propanoate metabolism
KO pathway
ko00010   
LinkDB

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