KEGG   PATHWAY: alii00230
Entry
alii00230                   Pathway                                
Name
Purine metabolism - Aliiglaciecola sp. LCG003
Class
Metabolism; Nucleotide metabolism
Pathway map
alii00230  Purine metabolism
alii00230

Module
alii_M00005  PRPP biosynthesis, ribose-5P => PRPP [PATH:alii00230]
alii_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:alii00230]
alii_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:alii00230]
alii_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:alii00230]
alii_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:alii00230]
alii_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:alii00230]
alii_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:alii00230]
Other DBs
GO: 0006163 0042278
Organism
Aliiglaciecola sp. LCG003 [GN:alii]
Gene
QR722_00660  gmk; guanylate kinase [KO:K00942] [EC:2.7.4.8]
QR722_00670  spoT; bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase [KO:K01139] [EC:2.7.6.5 3.1.7.2]
QR722_02200  [KO:K01524] [EC:3.6.1.11 3.6.1.40]
QR722_02230  purE; 5-(carboxyamino)imidazole ribonucleotide mutase [KO:K01588] [EC:5.4.99.18]
QR722_02235  [KO:K01589] [EC:6.3.4.18]
QR722_03295  [KO:K01081] [EC:3.1.3.5]
QR722_03885  [KO:K01525] [EC:3.6.1.41]
QR722_04555  yjjX; inosine/xanthosine triphosphatase [KO:K01529]
QR722_04900  [KO:K01519] [EC:3.6.1.66]
QR722_05090  ppnN; nucleotide 5'-monophosphate nucleosidase PpnN [KO:K06966] [EC:3.2.2.10 3.2.2.-]
QR722_05570  ndk; nucleoside-diphosphate kinase [KO:K00940] [EC:2.7.4.6]
QR722_05645  guaB; IMP dehydrogenase [KO:K00088] [EC:1.1.1.205]
QR722_05650  guaA; glutamine-hydrolyzing GMP synthase [KO:K01951] [EC:6.3.5.2]
QR722_05675  purL; phosphoribosylformylglycinamidine synthase [KO:K01952] [EC:6.3.5.3]
QR722_08605  purB; adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
QR722_08930  add; adenosine deaminase [KO:K01488] [EC:3.5.4.4]
QR722_08950  purN; phosphoribosylglycinamide formyltransferase [KO:K11175] [EC:2.1.2.2]
QR722_08955  purM; phosphoribosylformylglycinamidine cyclo-ligase [KO:K01933] [EC:6.3.3.1]
QR722_09020  [KO:K01923] [EC:6.3.2.6]
QR722_09035  nrdB; class Ia ribonucleoside-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
QR722_09040  nrdA; class 1a ribonucleoside-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
QR722_09350  guaD; guanine deaminase [KO:K01487] [EC:3.5.4.3]
QR722_09355  uraH; hydroxyisourate hydrolase [KO:K07127] [EC:3.5.2.17]
QR722_09360  uraD; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [KO:K16840] [EC:4.1.1.97]
QR722_09370  xdhB; xanthine dehydrogenase molybdopterin binding subunit [KO:K13482] [EC:1.17.1.4]
QR722_09375  xdhA; xanthine dehydrogenase small subunit [KO:K13481] [EC:1.17.1.4]
QR722_09385  puuE; allantoinase PuuE [KO:K16842] [EC:3.5.2.5]
QR722_09390  [KO:K21053] [EC:3.5.4.2]
QR722_09415  [KO:K02083] [EC:3.5.3.9]
QR722_09420  [KO:K00839] [EC:2.6.1.112]
QR722_09430  [KO:K22602] [EC:3.5.1.126]
QR722_09870  yfbR; 5'-deoxynucleotidase [KO:K08722] [EC:3.1.3.89]
QR722_10015  [KO:K01129] [EC:3.1.5.1]
QR722_11615  adk; adenylate kinase [KO:K00939] [EC:2.7.4.3]
QR722_11640  apt; adenine phosphoribosyltransferase [KO:K00759] [EC:2.4.2.7]
QR722_12120  [KO:K11177] [EC:1.17.1.4]
QR722_12125  [KO:K11178] [EC:1.17.1.4]
QR722_12130  [KO:K13483]
QR722_12900  pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) [KO:K01835] [EC:5.4.2.2]
QR722_12995  [KO:K00948] [EC:2.7.6.1]
QR722_13035  cysD; sulfate adenylyltransferase subunit CysD [KO:K00957] [EC:2.7.7.4]
QR722_13040  cysC; adenylyl-sulfate kinase [KO:K00860] [EC:2.7.1.25]
QR722_13050  cysN; sulfate adenylyltransferase subunit CysN [KO:K00956] [EC:2.7.7.4]
QR722_13160  purF; amidophosphoribosyltransferase [KO:K00764] [EC:2.4.2.14]
QR722_13800  pgeF; peptidoglycan editing factor PgeF [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
QR722_15025  ppx; exopolyphosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
QR722_15405  mazG; nucleoside triphosphate pyrophosphohydrolase [KO:K04765] [EC:3.6.1.9]
QR722_15410  relA; GTP diphosphokinase [KO:K00951] [EC:2.7.6.5]
QR722_16625  [KO:K03651] [EC:3.1.4.53]
QR722_16635  nudF; ADP-ribose diphosphatase [KO:K01515] [EC:3.6.1.13 3.6.1.-]
QR722_17195  surE; 5'/3'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
QR722_17355  [KO:K01939] [EC:6.3.4.4]
QR722_18415  purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase [KO:K00602] [EC:2.1.2.3 3.5.4.10]
QR722_18425  purD; phosphoribosylamine--glycine ligase [KO:K01945] [EC:6.3.4.13]
QR722_18580  yrfG; GMP/IMP nucleotidase [KO:K20881] [EC:3.1.3.-]
QR722_18585  nudE; ADP compounds hydrolase NudE [KO:K08312] [EC:3.6.1.-]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
alii00030  Pentose phosphate pathway
alii00220  Arginine biosynthesis
alii00250  Alanine, aspartate and glutamate metabolism
alii00260  Glycine, serine and threonine metabolism
alii00340  Histidine metabolism
alii00630  Glyoxylate and dicarboxylate metabolism
alii00730  Thiamine metabolism
alii00740  Riboflavin metabolism
alii00790  Folate biosynthesis
KO pathway
ko00230   

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