KEGG   PATHWAY: amq00010
Entry
amq00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Amycolatopsis methanolica
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
amq00010  Glycolysis / Gluconeogenesis
amq00010

Module
amq_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:amq00010]
amq_M00002  Glycolysis, core module involving three-carbon compounds [PATH:amq00010]
amq_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:amq00010]
amq_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:amq00010]
Other DBs
GO: 0006096 0006094
Organism
Amycolatopsis methanolica [GN:amq]
Gene
AMETH_6119  nagC4; sugar kinase [KO:K25026] [EC:2.7.1.2]
AMETH_4940  glk; glucokinase [KO:K25026] [EC:2.7.1.2]
AMETH_6128  nagC4; sugar kinase [KO:K25026] [EC:2.7.1.2]
AMETH_4094  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
AMETH_4515  pfk; phosphofructokinase [KO:K00850] [EC:2.7.1.11]
AMETH_4897  pfk; pyrophosphate-dependent phosphofructokinase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
AMETH_4530  glpX; fructose 1,6-bisphosphatase II [KO:K02446] [EC:3.1.3.11]
AMETH_4516  glpX; fructose 1,6-bisphosphatase II [KO:K02446] [EC:3.1.3.11]
AMETH_5852  glpX; fructose 1,6-bisphosphatase II [KO:K02446] [EC:3.1.3.11]
AMETH_4531  fructose-bisphosphate aldolase [KO:K01623] [EC:4.1.2.13]
AMETH_6838  fbaA; fructose-bisphosphate aldolase, class II [KO:K01624] [EC:4.1.2.13]
AMETH_6121  fbaA; Tagatose 1,6-diphosphate aldolase [KO:K01624] [EC:4.1.2.13]
AMETH_4102  tpiA; triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
AMETH_4104  gapA; glyceraldehyde-3-phosphate dehydrogenase, type I [KO:K00134] [EC:1.2.1.12]
AMETH_4103  pgk; phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
AMETH_0423  gpmA; phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
AMETH_5941  eno; phosphopyruvate hydratase,enolase [KO:K01689] [EC:4.2.1.11]
AMETH_4892  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
AMETH_2324  aceE; pyruvate dehydrogenase complex, dehydrogenase (E1) component [KO:K00163] [EC:1.2.4.1]
AMETH_5177  aceE; pyruvate dehydrogenase E1 component [KO:K00163] [EC:1.2.4.1]
AMETH_2385  pdhC; dihydrolipoyllysine-residue succinyltransferase [KO:K00627] [EC:2.3.1.12]
AMETH_5143  sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase [KO:K00627] [EC:2.3.1.12]
AMETH_5332  pdhD; dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
AMETH_5142  pdhD; dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
AMETH_0502  korA; 2-oxoglutarate ferredoxin oxidoreductase [KO:K00174] [EC:1.2.7.3 1.2.7.11]
AMETH_0501  korB; 2-oxoglutarate synthase [KO:K00175] [EC:1.2.7.3 1.2.7.11]
AMETH_1105  mycothiol-dependent formaldehyde dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
AMETH_3390  adh; alcohol dehydrogenase [KO:K13953] [EC:1.1.1.1]
AMETH_4585  6-hydroxyhexanoate dehydrogenase [KO:K13953] [EC:1.1.1.1]
AMETH_3880  6-hydroxyhexanoate dehydrogenase [KO:K13953] [EC:1.1.1.1]
AMETH_4524  exaA; PQQ-dependent dehydrogenase, methanol/ethanol family [KO:K00114] [EC:1.1.2.8]
AMETH_0838  betaine aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
AMETH_3996  feaB; aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
AMETH_4563  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
AMETH_3175  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
AMETH_3196  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
AMETH_3200  betB; aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
AMETH_4960  betaine aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
AMETH_5920  thcA; betaine aldehyde dehydrogenase [KO:K00138] [EC:1.2.1.-]
AMETH_5579  thcA; betaine aldehyde dehydrogenase [KO:K00138] [EC:1.2.1.-]
AMETH_2995  acs; O-succinylbenzoate-CoA ligase [KO:K01895] [EC:6.2.1.1]
AMETH_3092  butyrate--CoA ligase [KO:K01895] [EC:6.2.1.1]
AMETH_0207  acs; dicarboxylate-CoA ligase PimA [KO:K01895] [EC:6.2.1.1]
AMETH_2249  acs; AMP-dependent synthetase and ligase [KO:K01895] [EC:6.2.1.1]
AMETH_6617  acs; acetate-CoA ligase [KO:K01895] [EC:6.2.1.1]
AMETH_5581  acs; acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
AMETH_3627  acdA2; CoA-binding domain-containing protein [KO:K24012] [EC:6.2.1.13]
AMETH_6213  galM; Galactose mutarotase-like enzyme [KO:K01785] [EC:5.1.3.3]
AMETH_4787  ppgK; Polyphosphate glucokinase [KO:K00886] [EC:2.7.1.63]
AMETH_6972  pckA; phosphoenolpyruvate carboxykinase [KO:K01596] [EC:4.1.1.32]
AMETH_4166  nagE; PTS system, glucose/maltose/N-acetylglucosamine-specific IIA component [KO:K02777] [EC:2.7.1.-]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
amq00020  Citrate cycle (TCA cycle)
amq00030  Pentose phosphate pathway
amq00500  Starch and sucrose metabolism
amq00620  Pyruvate metabolism
amq00640  Propanoate metabolism
amq00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

DBGET integrated database retrieval system