KEGG   PATHWAY: csab03250
Entry
csab03250                   Pathway                                
Name
Viral life cycle - HIV-1 - Chlorocebus sabaeus (green monkey)
Class
Genetic Information Processing; Information processing in viruses
Pathway map
csab03250  Viral life cycle - HIV-1
csab03250

Organism
Chlorocebus sabaeus (green monkey) [GN:csab]
Gene
103216548  SAMHD1; SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 [KO:K22544] [EC:3.1.5.-]
103216977  CCNT2; cyclin T2 [KO:K15188]
103216995  CXCR4; C-X-C motif chemokine receptor 4 [KO:K04189]
103218480  CD4; CD4 molecule [KO:K06454]
103218749  [KO:K07936]
103218832  BICD1; BICD cargo adaptor 1 [KO:K18739]
103219159  MX2; MX dynamin like GTPase 2 [KO:K14754]
103219174  MX1; MX dynamin like GTPase 1 [KO:K14754]
103219389  MLLT3; MLLT3, super elongation complex subunit [KO:K15187]
103219425  PSIP1; PC4 and SFRS1 interacting protein 1 [KO:K25057]
103219760  BICD2; BICD cargo adaptor 2 [KO:K18739]
103220190  XPO1; exportin 1 [KO:K14290]
103220310  [KO:K03767] [EC:5.2.1.8]
103221298  [KO:K25661]
103221733  NELFE; negative elongation factor complex member E [KO:K15182]
103222108  NUP153; nucleoporin 153 [KO:K14296]
103222924  MAP1B; microtubule associated protein 1B [KO:K10429]
103223028  SMARCB1; SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 [KO:K11648]
103223331  APOBEC3D; apolipoprotein B mRNA editing enzyme catalytic subunit 3D [KO:K18750] [EC:3.5.4.-]
103223333  APOBEC3C; apolipoprotein B mRNA editing enzyme catalytic subunit 3C [KO:K18750] [EC:3.5.4.-]
103223334  APOBEC3G; apolipoprotein B mRNA editing enzyme catalytic subunit 3G [KO:K18750] [EC:3.5.4.-]
103223335  APOBEC3H; apolipoprotein B mRNA editing enzyme catalytic subunit 3H [KO:K18750] [EC:3.5.4.-]
103223371  EP300; E1A binding protein p300 [KO:K04498] [EC:2.3.1.48]
103223801  SERINC5; serine incorporator 5 [KO:K25655]
103224919  ELL2; elongation factor for RNA polymerase II 2 [KO:K15183]
103226128  PPIA; peptidylprolyl isomerase A [KO:K03767] [EC:5.2.1.8]
103226763  MDFIC; MyoD family inhibitor domain containing [KO:K27688]
103226876  TNPO3; transportin 3 [KO:K15436]
103227535  CCR5; C-C motif chemokine receptor 5 [KO:K04180]
103228716  CHMP4A; charged multivesicular body protein 4A [KO:K12194]
103229562  [KO:K03767] [EC:5.2.1.8]
103231185  FURIN; furin, paired basic amino acid cleaving enzyme [KO:K01349] [EC:3.4.21.75]
103231734  [KO:K03767] [EC:5.2.1.8]
103231770  CREBBP; CREB binding protein [KO:K04498] [EC:2.3.1.48]
103233218  VPS4A; vacuolar protein sorting 4 homolog A [KO:K12196]
103233762  MLLT1; MLLT1, super elongation complex subunit [KO:K15187]
103233878  PIN1; peptidylprolyl cis/trans isomerase, NIMA-interacting 1 [KO:K09578] [EC:5.2.1.8]
103234140  BST2; bone marrow stromal cell antigen 2 [KO:K06731]
103234149  MAP1S; microtubule associated protein 1S [KO:K10429]
103234183  ELL; elongation factor for RNA polymerase II [KO:K15183]
103234423  CPSF7; cleavage and polyadenylation specific factor 7 [KO:K14398]
103234674  SUPT5H; SPT5 homolog, DSIF elongation factor subunit [KO:K15172]
103237230  [KO:K03767] [EC:5.2.1.8]
103237885  [KO:K03767] [EC:5.2.1.8]
103238241  CCNT1; cyclin T1 [KO:K15188]
103238693  CPSF6; cleavage and polyadenylation specific factor 6 [KO:K14398]
103239119  TSG101; tumor susceptibility 101 [KO:K12183]
103239407  RAN; RAN, member RAS oncogene family [KO:K07936]
103239559  NELFB; negative elongation factor complex member B [KO:K15180]
103239826  CDK9; cyclin dependent kinase 9 [KO:K02211] [EC:2.7.11.22 2.7.11.23]
103241220  RANBP2; RAN binding protein 2 [KO:K12172] [EC:2.3.2.-]
103241748  KAT2B; lysine acetyltransferase 2B [KO:K06062] [EC:2.3.1.48]
103241851  PDCD6IP; programmed cell death 6 interacting protein [KO:K12200]
103242427  [KO:K03767] [EC:5.2.1.8]
103242846  SUPT4H1; SPT4 homolog, DSIF elongation factor subunit [KO:K15171]
103243383  [KO:K03767] [EC:5.2.1.8]
103243423  KAT2A; lysine acetyltransferase 2A [KO:K06062] [EC:2.3.1.48]
103243455  NELFCD; negative elongation factor complex member C/D [KO:K15181]
103243704  CHMP6; charged multivesicular body protein 6 [KO:K12195]
103243727  HGS; hepatocyte growth factor-regulated tyrosine kinase substrate [KO:K12182]
103244163  VPS4B; vacuolar protein sorting 4 homolog B [KO:K12196]
103244530  AFF4; AF4/FMR2 family member 4 [KO:K15185]
103245592  SERINC3; serine incorporator 3 [KO:K25661]
103245731  ELL3; elongation factor for RNA polymerase II 3 [KO:K15183]
103245739  MAP1A; microtubule associated protein 1A [KO:K10429]
103246475  NELFA; negative elongation factor complex member A [KO:K15179]
103247808  [KO:K18750] [EC:3.5.4.-]
103247881  TRIM5; tripartite motif containing 5 [KO:K10648] [EC:2.3.2.27]
103248636  CHMP4B; charged multivesicular body protein 4B [KO:K12194]
103248766  FEZ1; fasciculation and elongation protein zeta 1 [KO:K25663]
108663998  APOBEC3B; apolipoprotein B mRNA editing enzyme catalytic subunit 3B [KO:K18750] [EC:3.5.4.-]
Reference
PMID:27357278
  Authors
Li G, De Clercq E
  Title
HIV Genome-Wide Protein Associations: a Review of 30 Years of Research.
  Journal
Microbiol Mol Biol Rev 80:679-731 (2016)
DOI:10.1128/MMBR.00065-15
Reference
PMID:21284899
  Authors
Tagliamonte M, Tornesello ML, Buonaguro FM, Buonaguro L
  Title
Conformational HIV-1 envelope on particulate structures: a tool for chemokine coreceptor binding studies.
  Journal
J Transl Med 9 Suppl 1:S1 (2011)
DOI:10.1186/1479-5876-9-S1-S1
Reference
PMID:31028522
  Authors
Novikova M, Zhang Y, Freed EO, Peng K
  Title
Multiple Roles of HIV-1 Capsid during the Virus Replication Cycle.
  Journal
Virol Sin 34:119-134 (2019)
DOI:10.1007/s12250-019-00095-3
Reference
PMID:30286189
  Authors
Rawle DJ, Harrich D
  Title
Toward the "unravelling" of HIV: Host cell factors involved in HIV-1 core uncoating.
  Journal
PLoS Pathog 14:e1007270 (2018)
DOI:10.1371/journal.ppat.1007270
Reference
PMID:25036886
  Authors
Le Sage V, Mouland AJ, Valiente-Echeverria F
  Title
Roles of HIV-1 capsid in viral replication and immune evasion.
  Journal
Virus Res 193:116-29 (2014)
DOI:10.1016/j.virusres.2014.07.010
Reference
PMID:32429351
  Authors
Murphy RE, Saad JS
  Title
The Interplay between HIV-1 Gag Binding to the Plasma Membrane and Env Incorporation.
  Journal
Viruses 12:E548 (2020)
DOI:10.3390/v12050548
Reference
PMID:21360054
  Authors
He N, Zhou Q
  Title
New insights into the control of HIV-1 transcription: when Tat meets the 7SK snRNP and super elongation complex (SEC).
  Journal
J Neuroimmune Pharmacol 6:260-8 (2011)
DOI:10.1007/s11481-011-9267-6
Reference
PMID:19865606
  Authors
Pincetic A, Leis J
  Title
The Mechanism of Budding of Retroviruses From Cell Membranes.
  Journal
Adv Virol 2009:6239691-6239699 (2009)
DOI:10.1155/2009/623969
Reference
PMID:32858867
  Authors
Kleinpeter AB, Freed EO
  Title
HIV-1 Maturation: Lessons Learned from Inhibitors.
  Journal
Viruses 12:E940 (2020)
DOI:10.3390/v12090940
Reference
PMID:12944466
  Authors
Young TM, Wang Q, Pe'ery T, Mathews MB
  Title
The human I-mfa domain-containing protein, HIC, interacts with cyclin T1 and modulates P-TEFb-dependent transcription.
  Journal
Mol Cell Biol 23:6373-84 (2003)
DOI:10.1128/MCB.23.18.6373-6384.2003
Related
pathway
csab03013  Nucleocytoplasmic transport
csab04144  Endocytosis
KO pathway
ko03250   

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