KEGG   PATHWAY: enf00630
Entry
enf00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Enterobacter sp. FY-07
Class
Metabolism; Carbohydrate metabolism
Pathway map
enf00630  Glyoxylate and dicarboxylate metabolism
enf00630

Module
enf_M00012  Glyoxylate cycle [PATH:enf00630]
enf_M00621  Glycine cleavage system [PATH:enf00630]
Other DBs
GO: 0046487 0043648
Organism
Enterobacter sp. FY-07 [GN:enf]
Gene
AKI40_4699  aceA; Isocitrate lyase, putative [KO:K01637] [EC:4.1.3.1]
AKI40_4606  Acetyl-CoA synthetase, has propionyl-CoA synthetase activity [KO:K01895] [EC:6.2.1.1]
AKI40_4700  Malate synthase A [KO:K01638] [EC:2.3.3.9]
AKI40_0551  mdh; Malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
AKI40_2176  gltA; Citrate synthase [KO:K01647] [EC:2.3.3.1]
AKI40_3315  Aconitate hydratase 1 [KO:K01681] [EC:4.2.1.3]
AKI40_4162  Aconitate hydratase 2 [KO:K01682] [EC:4.2.1.3 4.2.1.99]
AKI40_3792  3-ketoacyl-CoA thiolase [KO:K00626] [EC:2.3.1.9]
AKI40_0903  Acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
AKI40_2733  katE; hydroperoxidase II [KO:K03781] [EC:1.11.1.6]
AKI40_2560  Glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
AKI40_0178  tkrA; Glyoxylate/hydroxypyruvate reductase B [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
AKI40_0416  Phosphoglycolate phosphatase, bacterial [KO:K01091] [EC:3.1.3.18]
AKI40_4912  glnA; Glutamine synthetase, type I [KO:K01915] [EC:6.3.1.2]
AKI40_1317  glyA; Serine hydroxymethyltransferase 1 [KO:K00600] [EC:2.1.2.1]
AKI40_0844  Glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
AKI40_0842  gcvT; glycine cleavage system aminomethyltransferase T [KO:K00605] [EC:2.1.2.10]
AKI40_4164  Dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
AKI40_0843  gcvH; Glycine cleavage system H protein [KO:K02437]
AKI40_0634  garR; Tartronate semialdehyde reductase [KO:K00042] [EC:1.1.1.60]
AKI40_4056  garK; Glycerate kinase I [KO:K00865] [EC:2.7.1.165]
AKI40_0635  garK; Glycerate kinase I [KO:K00865] [EC:2.7.1.165]
AKI40_3258  aldA; Aldehyde dehydrogenase A [KO:K07248] [EC:1.2.1.22 1.2.1.21]
AKI40_0048  Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit [KO:K03779] [EC:4.2.1.32]
AKI40_0047  Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit [KO:K03780] [EC:4.2.1.32]
AKI40_3567  eda; KHG/KDPG aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
AKI40_3440  yrhE; Molybdopterin oxidoreductase family protein [KO:K00123] [EC:1.17.1.9]
AKI40_4897  Formate dehydrogenase, alpha subunit [KO:K00123] [EC:1.17.1.9]
AKI40_4898  fdoG; Formate dehydrogenase alpha subunit [KO:K00123] [EC:1.17.1.9]
AKI40_4899  fdoH; Formate dehydrogenase beta subunit [KO:K00124]
AKI40_4900  Formate dehydrogenase, cytochrome b556 subunit [KO:K00127]
AKI40_3358  purU; Formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
AKI40_0710  formimidoylglutamase, putative [KO:K01458] [EC:3.5.1.68]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
enf00010  Glycolysis / Gluconeogenesis
enf00020  Citrate cycle (TCA cycle)
enf00030  Pentose phosphate pathway
enf00053  Ascorbate and aldarate metabolism
enf00071  Fatty acid degradation
enf00230  Purine metabolism
enf00250  Alanine, aspartate and glutamate metabolism
enf00260  Glycine, serine and threonine metabolism
enf00620  Pyruvate metabolism
enf00710  Carbon fixation by Calvin cycle
enf00750  Vitamin B6 metabolism
enf00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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