KEGG   PATHWAY: ido00230
Entry
ido00230                    Pathway                                
Name
Purine metabolism - Isoptericola dokdonensis
Class
Metabolism; Nucleotide metabolism
Pathway map
ido00230  Purine metabolism
ido00230

Module
ido_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:ido00230]
ido_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:ido00230]
ido_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:ido00230]
ido_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:ido00230]
Other DBs
GO: 0006163 0042278
Organism
Isoptericola dokdonensis [GN:ido]
Gene
I598_2191  pgm; Phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
I598_3189  prs; Ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
I598_2020  purF; Amidophosphoribosyltransferase precursor [KO:K00764] [EC:2.4.2.14]
I598_2070  purD; Phosphoribosylamine--glycine ligase [KO:K01945] [EC:6.3.4.13]
I598_1503  purN; Phosphoribosylglycinamide formyltransferase [KO:K11175] [EC:2.1.2.2]
I598_2034  purL; Phosphoribosylformylglycinamidine synthase 2 [KO:K23269] [EC:6.3.5.3]
I598_2065  phosphoribosylformylglycinamidine synthase subunit PurS [KO:K23264] [EC:6.3.5.3]
I598_2064  purQ; Phosphoribosylformylglycinamidine synthase 1 [KO:K23265] [EC:6.3.5.3 3.5.1.2]
I598_2019  purM; Phosphoribosylformylglycinamidine cyclo-ligase [KO:K01933] [EC:6.3.3.1]
I598_3308  purK; N5-carboxyaminoimidazole ribonucleotide synthase [KO:K01589] [EC:6.3.4.18]
I598_3309  purE; N5-carboxyaminoimidazole ribonucleotide mutase [KO:K01588] [EC:5.4.99.18]
I598_2185  purB; Adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
I598_1495  purH; Bifunctional purine biosynthesis protein PurH [KO:K00602] [EC:2.1.2.3 3.5.4.10]
I598_0541  apt; Adenine phosphoribosyltransferase [KO:K00759] [EC:2.4.2.7]
I598_2646  yhcR; Endonuclease YhcR precursor [KO:K01081] [EC:3.1.3.5]
I598_2022  cel5A; Endoglucanase 5A [KO:K01081] [EC:3.1.3.5]
I598_2081  nagD; Ribonucleotide monophosphatase NagD [KO:K02566] [EC:3.1.3.5]
I598_1313  punA; Purine nucleoside phosphorylase [KO:K03783] [EC:2.4.2.1]
I598_0964  yfiH; Laccase domain protein YfiH [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
I598_3011  hpt; Hypoxanthine-guanine phosphoribosyltransferase [KO:K00760] [EC:2.4.2.8]
I598_1561  putative oxidoreductase [KO:K00088] [EC:1.1.1.205]
I598_1563  guaB_2; Inosine-5'-monophosphate dehydrogenase [KO:K00088] [EC:1.1.1.205]
I598_1087  ndkA; Nucleoside diphosphate kinase [KO:K00940] [EC:2.7.4.6]
I598_1247  rdgB; dITP/XTP pyrophosphatase [KO:K01519] [EC:3.6.1.66]
I598_1539  guaA_1; GMP synthase [glutamine-hydrolyzing] [KO:K01951] [EC:6.3.5.2]
I598_2933  guaA_2; GMP synthase [glutamine-hydrolyzing] [KO:K01951] [EC:6.3.5.2]
I598_3071  glutamine amidotransferase [KO:K01951] [EC:6.3.5.2]
I598_0450  guaB_1; Inosine-5'-monophosphate dehydrogenase [KO:K26110] [EC:1.7.1.7]
I598_0595  gmk; Guanylate kinase [KO:K00942] [EC:2.7.4.8]
I598_3453  nrdE2; Ribonucleoside-diphosphate reductase subunit alpha 2 [KO:K00525] [EC:1.17.4.1]
I598_3455  nrdF2; Ribonucleoside-diphosphate reductase subunit beta nrdF2 [KO:K00526] [EC:1.17.4.1]
I598_0277  dgt; Deoxyguanosinetriphosphate triphosphohydrolase [KO:K01129] [EC:3.1.5.1]
I598_0542  relA; Bifunctional (p)ppGpp synthase/hydrolase [KO:K01139] [EC:2.7.6.5 3.1.7.2]
I598_2757  gppA_1; Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
I598_3233  gppA_2; Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
I598_2469  ywaC; GTP pyrophosphokinase YwaC [KO:K07816] [EC:2.7.6.5]
I598_1300  pH-sensitive adenylate cyclase [KO:K01768] [EC:4.6.1.1]
I598_3405  hypothetical protein [KO:K01768] [EC:4.6.1.1]
I598_2073  purA; Adenylosuccinate synthetase [KO:K01939] [EC:6.3.4.4]
I598_1319  Adenine deaminase [KO:K01488] [EC:3.5.4.4]
I598_1660  Aminodeoxyfutalosine deaminase [KO:K01488] [EC:3.5.4.4]
I598_2316  Adenine deaminase [KO:K21053] [EC:3.5.4.2]
I598_1616  adk; Adenylate kinase [KO:K00939] [EC:2.7.4.3]
I598_0525  AP-4-A phosphorylase [KO:K19710] [EC:2.7.7.53]
I598_3348  cysNC; Bifunctional enzyme CysN/CysC [KO:K00956] [EC:2.7.7.4]
I598_3347  cysD; Sulfate adenylyltransferase subunit 2 [KO:K00957] [EC:2.7.7.4]
I598_3345  cysC; putative adenylyl-sulfate kinase [KO:K00958] [EC:2.7.7.4]
I598_1238  hpxO_2; FAD-dependent urate hydroxylase [KO:K16839] [EC:1.14.13.113]
I598_1237  hiuH; 5-hydroxyisourate hydrolase precursor [KO:K07127] [EC:3.5.2.17]
I598_1236  uao; Uric acid degradation bifunctional protein [KO:K16840] [EC:4.1.1.97]
I598_1234  allB; Allantoinase [KO:K01466] [EC:3.5.2.5]
I598_1230  amaB; N-carbamoyl-L-amino acid hydrolase [KO:K02083] [EC:3.5.3.9]
I598_1231  pucG; Purine catabolism protein PucG [KO:K00839] [EC:2.6.1.112]
I598_1577  ureC; Urease subunit alpha [KO:K01428] [EC:3.5.1.5]
I598_1576  ureB; Urease subunit beta [KO:K01429] [EC:3.5.1.5]
I598_1575  ureA1; Urease subunit gamma 1 [KO:K01430] [EC:3.5.1.5]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
ido00030  Pentose phosphate pathway
ido00220  Arginine biosynthesis
ido00250  Alanine, aspartate and glutamate metabolism
ido00260  Glycine, serine and threonine metabolism
ido00340  Histidine metabolism
ido00630  Glyoxylate and dicarboxylate metabolism
ido00730  Thiamine metabolism
ido00740  Riboflavin metabolism
ido00790  Folate biosynthesis
KO pathway
ko00230   
LinkDB

DBGET integrated database retrieval system