KEGG   PATHWAY: lsol00230
Entry
lsol00230                   Pathway                                
Name
Purine metabolism - Lysobacter soli
Class
Metabolism; Nucleotide metabolism
Pathway map
lsol00230  Purine metabolism
lsol00230

Module
lsol_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:lsol00230]
lsol_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:lsol00230]
lsol_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:lsol00230]
lsol_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:lsol00230]
lsol_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:lsol00230]
lsol_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:lsol00230]
Other DBs
GO: 0006163 0042278
Organism
Lysobacter soli [GN:lsol]
Gene
GOY17_04650  NUDIX domain-containing protein [KO:K01515] [EC:3.6.1.13 3.6.1.-]
GOY17_04410  nudE; ADP compounds hydrolase NudE [KO:K08312] [EC:3.6.1.-]
GOY17_17875  phosphomannomutase/phosphoglucomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
GOY17_04865  ribose-phosphate diphosphokinase [KO:K00948] [EC:2.7.6.1]
GOY17_05325  purF; amidophosphoribosyltransferase [KO:K00764] [EC:2.4.2.14]
GOY17_16480  purD; phosphoribosylamine--glycine ligase [KO:K01945] [EC:6.3.4.13]
GOY17_14615  phosphoribosylglycinamide formyltransferase [KO:K11175] [EC:2.1.2.2]
GOY17_13195  purT; formate-dependent phosphoribosylglycinamide formyltransferase [KO:K08289] [EC:6.3.1.21]
GOY17_03650  purL; phosphoribosylformylglycinamidine synthase [KO:K01952] [EC:6.3.5.3]
GOY17_14610  phosphoribosylformylglycinamidine cyclo-ligase [KO:K01933] [EC:6.3.3.1]
GOY17_14120  5-(carboxyamino)imidazole ribonucleotide synthase [KO:K01589] [EC:6.3.4.18]
GOY17_14125  purE; 5-(carboxyamino)imidazole ribonucleotide mutase [KO:K01588] [EC:5.4.99.18]
GOY17_03255  phosphoribosylaminoimidazolesuccinocarboxamide synthase [KO:K01923] [EC:6.3.2.6]
GOY17_07755  purB; adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
GOY17_16470  purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase [KO:K00602] [EC:2.1.2.3 3.5.4.10]
GOY17_04605  adenine phosphoribosyltransferase [KO:K00759] [EC:2.4.2.7]
GOY17_07860  5'-nucleotidase [KO:K01081] [EC:3.1.3.5]
GOY17_05635  surE; 5'/3'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
GOY17_04010  pgeF; peptidoglycan editing factor PgeF [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
GOY17_12485  hypoxanthine-guanine phosphoribosyltransferase [KO:K00760] [EC:2.4.2.8]
GOY17_08230  guaB; IMP dehydrogenase [KO:K00088] [EC:1.1.1.205]
GOY17_08165  nucleoside-diphosphate kinase [KO:K00940] [EC:2.7.4.6]
GOY17_15995  rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase [KO:K01519] [EC:3.6.1.66]
GOY17_09995  molybdopterin-dependent oxidoreductase [KO:K11177] [EC:1.17.1.4]
GOY17_09990  xanthine dehydrogenase family protein subunit M [KO:K11178] [EC:1.17.1.4]
GOY17_09985  paoA; aldehyde dehydrogenase iron-sulfur subunit [KO:K13483]
GOY17_08240  guaA; glutamine-hydrolyzing GMP synthase [KO:K01951] [EC:6.3.5.2]
GOY17_00490  glutamine amidotransferase [KO:K01951] [EC:6.3.5.2]
GOY17_11170  glutamine amidotransferase [KO:K01951] [EC:6.3.5.2]
GOY17_12205  nucleoside deaminase [KO:K01487] [EC:3.5.4.3]
GOY17_15975  guanylate kinase [KO:K00942] [EC:2.7.4.8]
GOY17_02370  adenosylcobalamin-dependent ribonucleoside-diphosphate reductase [KO:K00525] [EC:1.17.4.1]
GOY17_15965  RelA/SpoT family protein [KO:K01139] [EC:2.7.6.5 3.1.7.2]
GOY17_12915  ppx; exopolyphosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
GOY17_04290  RelA/SpoT family protein [KO:K00951] [EC:2.7.6.5]
GOY17_12500  CYTH domain-containing protein [KO:K01768] [EC:4.6.1.1]
GOY17_05720  adenylosuccinate synthase [KO:K01939] [EC:6.3.4.4]
GOY17_02225  carbohydrate kinase family protein [KO:K00856] [EC:2.7.1.20]
GOY17_17400  AMP nucleosidase [KO:K01241] [EC:3.2.2.4]
GOY17_14090  DUF3412 domain-containing protein [KO:K06966] [EC:3.2.2.10 3.2.2.-]
GOY17_16165  adenylate kinase [KO:K00939] [EC:2.7.4.3]
GOY17_04420  mazG; nucleoside triphosphate pyrophosphohydrolase [KO:K04765] [EC:3.6.1.9]
GOY17_14535  cysN; sulfate adenylyltransferase subunit CysN [KO:K00955] [EC:2.7.7.4 2.7.1.25]
GOY17_14540  cysD; sulfate adenylyltransferase subunit CysD [KO:K00957] [EC:2.7.7.4]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
lsol00030  Pentose phosphate pathway
lsol00220  Arginine biosynthesis
lsol00250  Alanine, aspartate and glutamate metabolism
lsol00260  Glycine, serine and threonine metabolism
lsol00340  Histidine metabolism
lsol00630  Glyoxylate and dicarboxylate metabolism
lsol00730  Thiamine metabolism
lsol00740  Riboflavin metabolism
lsol00790  Folate biosynthesis
KO pathway
ko00230   
LinkDB

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