KEGG   PATHWAY: mich00310
Entry
mich00310                   Pathway                                
Name
Lysine degradation - Micromonospora sp. HM134
Class
Metabolism; Amino acid metabolism
Pathway map
mich00310  Lysine degradation
mich00310

Other DBs
GO: 0006554
Organism
Micromonospora sp. HM134 [GN:mich]
Gene
FJK98_24375  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
FJK98_02870  acyl-CoA dehydrogenase [KO:K00252] [EC:1.3.8.6]
FJK98_06650  enoyl-CoA hydratase/isomerase family protein [KO:K01692] [EC:4.2.1.17]
FJK98_20470  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
FJK98_26765  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
FJK98_00930  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
FJK98_04855  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
FJK98_05160  gabT; 4-aminobutyrate--2-oxoglutarate transaminase [KO:K07250] [EC:2.6.1.19 2.6.1.22 2.6.1.48]
FJK98_21340  NAD-dependent succinate-semialdehyde dehydrogenase [KO:K00135] [EC:1.2.1.16 1.2.1.79 1.2.1.20]
FJK98_10165  NADP-dependent succinic semialdehyde dehydrogenase [KO:K00135] [EC:1.2.1.16 1.2.1.79 1.2.1.20]
FJK98_26815  aldehyde dehydrogenase family protein [KO:K00135] [EC:1.2.1.16 1.2.1.79 1.2.1.20]
FJK98_17895  lysine 2,3-aminomutase [KO:K01844] [EC:5.4.3.3]
FJK98_17890  lysine 2,3-aminomutase [KO:K18011] [EC:5.4.3.3]
FJK98_17905  zinc-binding alcohol dehydrogenase [KO:K18012] [EC:1.4.1.11]
FJK98_29675  3-keto-5-aminohexanoate cleavage protein [KO:K18013] [EC:2.3.1.247]
FJK98_17885  3-aminobutyryl-CoA ammonia-lyase [KO:K18014] [EC:4.3.1.14]
FJK98_04315  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
Compound
C00024  Acetyl-CoA
C00026  2-Oxoglutarate
C00037  Glycine
C00042  Succinate
C00047  L-Lysine
C00068  Thiamin diphosphate
C00136  Butanoyl-CoA
C00164  Acetoacetate
C00322  2-Oxoadipate
C00332  Acetoacetyl-CoA
C00408  L-Pipecolate
C00431  5-Aminopentanoate
C00449  N6-(L-1,3-Dicarboxypropyl)-L-lysine
C00450  (S)-2,3,4,5-Tetrahydropyridine-2-carboxylate
C00487  Carnitine
C00489  Glutarate
C00527  Glutaryl-CoA
C00739  D-Lysine
C00877  Crotonoyl-CoA
C00956  L-2-Aminoadipate
C00990  5-Aminopentanamide
C01087  (R)-2-Hydroxyglutarate
C01142  (3S)-3,6-Diaminohexanoate
C01144  (S)-3-Hydroxybutanoyl-CoA
C01149  4-Trimethylammoniobutanal
C01181  4-Trimethylammoniobutanoate
C01186  (3S,5S)-3,5-Diaminohexanoate
C01211  Procollagen 5-hydroxy-L-lysine
C01259  (3S)-3-Hydroxy-N6,N6,N6-trimethyl-L-lysine
C01672  Cadaverine
C02188  Protein lysine
C02727  N6-Acetyl-L-lysine
C03087  5-Acetamidopentanoate
C03196  (S)-2-Hydroxyglutarate
C03239  6-Amino-2-oxohexanoate
C03273  5-Oxopentanoate
C03366  5-Phosphooxy-L-lysine
C03656  (S)-5-Amino-3-oxohexanoic acid
C03793  N6,N6,N6-Trimethyl-L-lysine
C04020  D-Lysopine
C04076  L-2-Aminoadipate 6-semialdehyde
C04092  Delta1-Piperideine-2-carboxylate
C04487  5-(D-Galactosyloxy)-L-lysine-procollagen
C05161  (2R,5S)-2,5-Diaminohexanoate
C05231  L-3-Aminobutyryl-CoA
C05544  Protein N6-methyl-L-lysine
C05545  Protein N6,N6-dimethyl-L-lysine
C05546  Protein N6,N6,N6-trimethyl-L-lysine
C05548  6-Acetamido-2-oxohexanoate
C05825  2-Amino-5-oxohexanoate
C06157  [Dihydrolipoyllysine-residue succinyltransferase] S-glutaryldihydrolipoyllysine
C12455  5-Aminopentanal
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16741  L-Hydroxylysine
C22667  4-Carboxy-1-hydroxybutyryl-ThPP
Reference
PMID:11802770
  Authors
Vaz FM, Wanders RJ.
  Title
Carnitine biosynthesis in mammals.
  Journal
Biochem J 361:417-29 (2002)
DOI:10.1042/bj3610417
Reference
PMID:1682209
  Authors
Large PJ, Robertson A.
  Title
The route of lysine breakdown in Candida tropicalis.
  Journal
FEMS Microbiol Lett 66:209-13 (1991)
DOI:10.1111/j.1574-6968.1990.tb03998.x
Related
pathway
mich00020  Citrate cycle (TCA cycle)
mich00300  Lysine biosynthesis
mich00311  Penicillin and cephalosporin biosynthesis
mich00780  Biotin metabolism
KO pathway
ko00310   
LinkDB

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