KEGG   PATHWAY: npd03250
Entry
npd03250                    Pathway                                
Name
Viral life cycle - HIV-1 - Nothoprocta perdicaria (Chilean tinamou)
Class
Genetic Information Processing; Information processing in viruses
Pathway map
npd03250  Viral life cycle - HIV-1
npd03250

Organism
Nothoprocta perdicaria (Chilean tinamou) [GN:npd]
Gene
112942321  MDFIC; myoD family inhibitor domain-containing protein [KO:K27688]
112943059  NELFA; negative elongation factor A [KO:K15179]
112943325  RGPD4; ranBP2-like and GRIP domain-containing protein 4 isoform X1 [KO:K12172] [EC:2.3.2.-]
112943401  VPS4B; vacuolar protein sorting-associated protein 4B [KO:K12196]
112943625  [KO:K04180]
112943643  [KO:K04180]
112943744  PDCD6IP; programmed cell death 6-interacting protein isoform X1 [KO:K12200]
112944091  SERINC5; serine incorporator 5 [KO:K25655]
112944690  MAP1B; microtubule-associated protein 1B [KO:K10429]
112945275  HGS; hepatocyte growth factor-regulated tyrosine kinase substrate [KO:K12182]
112945292  CHMP6; charged multivesicular body protein 6 [KO:K12195]
112945694  SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [KO:K22544] [EC:3.1.5.-]
112945851  SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 [KO:K11648]
112945908  RAN; GTP-binding nuclear protein Ran [KO:K07936]
112946445  EP300; histone acetyltransferase p300 [KO:K04498] [EC:2.3.1.48]
112946909  ELL; RNA polymerase II elongation factor ELL [KO:K15183]
112947512  VPS4A; vacuolar protein sorting-associated protein 4A [KO:K12196]
112948137  BICD1; protein bicaudal D homolog 1 [KO:K18739]
112948250  MAP1A; microtubule-associated protein 1A [KO:K10429]
112948343  FURIN; furin [KO:K01349] [EC:3.4.21.75]
112948580  CCNT2; cyclin-T2 isoform X1 [KO:K15188]
112948630  CXCR4; C-X-C chemokine receptor type 4 [KO:K04189]
112949100  MAP1S; microtubule-associated protein 1S [KO:K10429]
112949112  MLLT1; protein ENL isoform X1 [KO:K15187]
112949700  SERINC3; serine incorporator 3 [KO:K25661]
112949779  NELFCD; negative elongation factor C/D [KO:K15181]
112950031  CHMP4B; charged multivesicular body protein 4b isoform X1 [KO:K12194]
112950331  CCNT1; cyclin-T1 [KO:K15188]
112951383  ELL2; RNA polymerase II elongation factor ELL2 [KO:K15183]
112951387  MLLT3; protein AF-9 [KO:K15187]
112951447  TSG101; tumor susceptibility gene 101 protein isoform X1 [KO:K12183]
112951623  TNPO3; transportin-3 [KO:K15436]
112951835  KAT2A; histone acetyltransferase KAT2A [KO:K06062] [EC:2.3.1.48]
112952738  CPSF7; cleavage and polyadenylation specificity factor subunit 7 [KO:K14398]
112952826  AFF4; AF4/FMR2 family member 4 [KO:K15185]
112953021  BICD2; protein bicaudal D homolog 2 [KO:K18739]
112953906  NUP153; nuclear pore complex protein Nup153 [KO:K14296]
112954781  [KO:K25663]
112955675  CREBBP; CREB-binding protein isoform X1 [KO:K04498] [EC:2.3.1.48]
112955913  NELFB; negative elongation factor B [KO:K15180]
112956004  CDK9; cyclin-dependent kinase 9 [KO:K02211] [EC:2.7.11.22 2.7.11.23]
112956467  PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [KO:K09578] [EC:5.2.1.8]
112956705  SUPT4H1; transcription elongation factor SPT4 [KO:K15171]
112957208  KAT2B; histone acetyltransferase KAT2B isoform X1 [KO:K06062] [EC:2.3.1.48]
112957729  SUPT5H; transcription elongation factor SPT5 [KO:K15172]
112958801  PSIP1; PC4 and SFRS1-interacting protein [KO:K25057]
112958823  CPSF6; cleavage and polyadenylation specificity factor subunit 6 isoform X1 [KO:K14398]
112958962  XPO1; exportin-1 [KO:K14290]
112959079  [KO:K14754]
112960135  CD4; T-cell surface glycoprotein CD4 [KO:K06454]
Reference
PMID:27357278
  Authors
Li G, De Clercq E
  Title
HIV Genome-Wide Protein Associations: a Review of 30 Years of Research.
  Journal
Microbiol Mol Biol Rev 80:679-731 (2016)
DOI:10.1128/MMBR.00065-15
Reference
PMID:21284899
  Authors
Tagliamonte M, Tornesello ML, Buonaguro FM, Buonaguro L
  Title
Conformational HIV-1 envelope on particulate structures: a tool for chemokine coreceptor binding studies.
  Journal
J Transl Med 9 Suppl 1:S1 (2011)
DOI:10.1186/1479-5876-9-S1-S1
Reference
PMID:31028522
  Authors
Novikova M, Zhang Y, Freed EO, Peng K
  Title
Multiple Roles of HIV-1 Capsid during the Virus Replication Cycle.
  Journal
Virol Sin 34:119-134 (2019)
DOI:10.1007/s12250-019-00095-3
Reference
PMID:30286189
  Authors
Rawle DJ, Harrich D
  Title
Toward the "unravelling" of HIV: Host cell factors involved in HIV-1 core uncoating.
  Journal
PLoS Pathog 14:e1007270 (2018)
DOI:10.1371/journal.ppat.1007270
Reference
PMID:25036886
  Authors
Le Sage V, Mouland AJ, Valiente-Echeverria F
  Title
Roles of HIV-1 capsid in viral replication and immune evasion.
  Journal
Virus Res 193:116-29 (2014)
DOI:10.1016/j.virusres.2014.07.010
Reference
PMID:32429351
  Authors
Murphy RE, Saad JS
  Title
The Interplay between HIV-1 Gag Binding to the Plasma Membrane and Env Incorporation.
  Journal
Viruses 12:E548 (2020)
DOI:10.3390/v12050548
Reference
PMID:21360054
  Authors
He N, Zhou Q
  Title
New insights into the control of HIV-1 transcription: when Tat meets the 7SK snRNP and super elongation complex (SEC).
  Journal
J Neuroimmune Pharmacol 6:260-8 (2011)
DOI:10.1007/s11481-011-9267-6
Reference
PMID:19865606
  Authors
Pincetic A, Leis J
  Title
The Mechanism of Budding of Retroviruses From Cell Membranes.
  Journal
Adv Virol 2009:6239691-6239699 (2009)
DOI:10.1155/2009/623969
Reference
PMID:32858867
  Authors
Kleinpeter AB, Freed EO
  Title
HIV-1 Maturation: Lessons Learned from Inhibitors.
  Journal
Viruses 12:E940 (2020)
DOI:10.3390/v12090940
Reference
PMID:12944466
  Authors
Young TM, Wang Q, Pe'ery T, Mathews MB
  Title
The human I-mfa domain-containing protein, HIC, interacts with cyclin T1 and modulates P-TEFb-dependent transcription.
  Journal
Mol Cell Biol 23:6373-84 (2003)
DOI:10.1128/MCB.23.18.6373-6384.2003
Related
pathway
npd03013  Nucleocytoplasmic transport
npd04144  Endocytosis
KO pathway
ko03250   

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