KEGG   PATHWAY: atri00240
Entry
atri00240                   Pathway                                
Name
Pyrimidine metabolism - Amaranthus tricolor (tampala)
Class
Metabolism; Nucleotide metabolism
Pathway map
atri00240  Pyrimidine metabolism
atri00240

Module
atri_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:atri00240]
atri_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:atri00240]
atri_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:atri00240]
atri_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:atri00240]
Other DBs
GO: 0006220 0006213
Organism
Amaranthus tricolor (tampala) [GN:atri]
Gene
130810359  carbamoyl-phosphate synthase large chain, chloroplastic [KO:K01955] [EC:6.3.5.5]
130827124  carbamoyl-phosphate synthase small chain, chloroplastic [KO:K01956] [EC:6.3.5.5]
130808124  aspartate carbamoyltransferase, chloroplastic [KO:K00609] [EC:2.1.3.2]
130797939  dihydroorotase, mitochondrial-like [KO:K01465] [EC:3.5.2.3]
130799864  dihydroorotase, mitochondrial-like isoform X1 [KO:K01465] [EC:3.5.2.3]
130827655  dihydroorotate dehydrogenase (quinone), mitochondrial-like [KO:K00254] [EC:1.3.5.2]
130812705  dihydroorotate dehydrogenase (quinone), mitochondrial-like isoform X1 [KO:K00254] [EC:1.3.5.2]
130800619  uridine 5'-monophosphate synthase-like [KO:K13421] [EC:2.4.2.10 4.1.1.23]
130804253  uridine 5'-monophosphate synthase-like [KO:K13421] [EC:2.4.2.10 4.1.1.23]
130806956  UMP-CMP kinase-like [KO:K13800] [EC:2.7.4.14]
130796744  UMP-CMP kinase 3-like [KO:K13800] [EC:2.7.4.14]
130810440  UMP-CMP kinase 3-like [KO:K13800] [EC:2.7.4.14]
130811011  UMP-CMP kinase 3 [KO:K13800] [EC:2.7.4.14]
130804622  uridylate kinase PUMPKIN, chloroplastic [KO:K09903] [EC:2.7.4.22]
130809987  nucleoside diphosphate kinase 1 [KO:K00940] [EC:2.7.4.6]
130827276  nucleoside diphosphate kinase 2, chloroplastic [KO:K00940] [EC:2.7.4.6]
130809085  probable apyrase 6 [KO:K01510] [EC:3.6.1.5]
130814537  probable apyrase 6 isoform X1 [KO:K01510] [EC:3.6.1.5]
130797756  apyrase 2-like [KO:K14641] [EC:3.6.1.5]
130824432  uncharacterized protein LOC130824432 [KO:K01513] [EC:3.1.4.1 3.6.1.9]
130814907  uncharacterized protein LOC130814907 isoform X1 [KO:K01513] [EC:3.1.4.1 3.6.1.9]
130808942  nudix hydrolase 25 [KO:K26955] [EC:3.6.1.17]
130797881  uncharacterized protein LOC130797881 [KO:K01937] [EC:6.3.4.2]
130798492  uncharacterized protein LOC130798492 isoform X1 [KO:K01937] [EC:6.3.4.2]
130800199  uncharacterized protein LOC130800199 [KO:K01937] [EC:6.3.4.2]
130821061  inorganic pyrophosphatase TTM2-like [KO:K00876] [EC:2.7.1.48]
130806492  inorganic pyrophosphatase TTM1-like [KO:K00876] [EC:2.7.1.48]
130809161  inorganic pyrophosphatase TTM2-like isoform X1 [KO:K00876] [EC:2.7.1.48]
130811285  uridine kinase-like protein 3 isoform X1 [KO:K00876] [EC:2.7.1.48]
130800610  uridine/cytidine kinase UKL1, chloroplastic [KO:K00876] [EC:2.7.1.48]
130824421  uncharacterized protein LOC130824421 [KO:K03787] [EC:3.1.3.5 3.1.3.6]
130813221  uncharacterized protein LOC130813221 [KO:K03787] [EC:3.1.3.5 3.1.3.6]
130816020  uncharacterized protein LOC130816020 isoform X1 [KO:K03787] [EC:3.1.3.5 3.1.3.6]
130809117  probable uridine nucleosidase 2 [KO:K01240] [EC:3.2.2.3]
130813291  uridine nucleosidase 1 [KO:K01240] [EC:3.2.2.3]
130809846  uracil phosphoribosyltransferase [KO:K00761] [EC:2.4.2.9]
130796766  pseudouridine-5'-phosphate glycosidase isoform X1 [KO:K16329] [EC:4.2.1.70]
130828372  uncharacterized protein LOC130828372 isoform X1 [KO:K24242] [EC:3.1.3.91]
130824435  cytidine deaminase 1 [KO:K01489] [EC:3.5.4.5]
130820166  ribonucleoside-diphosphate reductase large subunit [KO:K10807] [EC:1.17.4.1]
130824247  ribonucleoside-diphosphate reductase small chain [KO:K10808] [EC:1.17.4.1]
130804191  ribonucleoside-diphosphate reductase small chain A [KO:K10808] [EC:1.17.4.1]
130809631  uncharacterized protein LOC130809631 [KO:K16904] [EC:3.6.1.12]
130826031  uncharacterized protein LOC130826031 [KO:K16904] [EC:3.6.1.12]
130798244  uncharacterized protein LOC130798244 [KO:K16904] [EC:3.6.1.12]
130798284  uncharacterized protein LOC130798284 [KO:K16904] [EC:3.6.1.12]
130800233  uncharacterized protein LOC130800233 [KO:K16904] [EC:3.6.1.12]
130807424  uncharacterized protein LOC130807424 [KO:K07023] [EC:3.1.3.89]
130824061  uncharacterized protein LOC130824061 [KO:K07023] [EC:3.1.3.89]
130797695  uncharacterized protein LOC130797695 [KO:K01493] [EC:3.5.4.12]
130806526  thymidylate kinase isoform X1 [KO:K00943] [EC:2.7.4.9]
130801325  deoxyuridine 5'-triphosphate nucleotidohydrolase [KO:K01520] [EC:3.6.1.23]
130805273  thymidine kinase a [KO:K00857] [EC:2.7.1.21]
130824222  thymidine kinase b-like [KO:K00857] [EC:2.7.1.21]
130815728  thymidine kinase a-like [KO:K00857] [EC:2.7.1.21]
130809792  bifunctional dihydrofolate reductase-thymidylate synthase 1-like [KO:K13998] [EC:1.5.1.3 2.1.1.45]
130815602  bifunctional dihydrofolate reductase-thymidylate synthase 1-like [KO:K13998] [EC:1.5.1.3 2.1.1.45]
130802740  dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic [KO:K00207] [EC:1.3.1.2]
130796798  dihydropyrimidinase [KO:K01464] [EC:3.5.2.2]
130797346  beta-ureidopropionase [KO:K01431] [EC:3.5.1.6]
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C00941  3',5'-Cyclic CMP
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
C22509  3',5'-Cyclic UMP
Related
pathway
atri00030  Pentose phosphate pathway
atri00220  Arginine biosynthesis
atri00250  Alanine, aspartate and glutamate metabolism
atri00280  Valine, leucine and isoleucine degradation
atri00410  beta-Alanine metabolism
KO pathway
ko00240   
LinkDB

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