KEGG   PATHWAY: bho00230
Entry
bho00230                    Pathway                                
Name
Purine metabolism - Bordetella holmesii ATCC 51541
Class
Metabolism; Nucleotide metabolism
Pathway map
bho00230  Purine metabolism
bho00230

Module
bho_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:bho00230]
bho_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:bho00230]
bho_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:bho00230]
bho_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:bho00230]
bho_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:bho00230]
Other DBs
GO: 0006163 0042278
Organism
Bordetella holmesii ATCC 51541 [GN:bho]
Gene
D560_2997  NUDIX domain protein [KO:K01515] [EC:3.6.1.13 3.6.1.-]
D560_0469  phosphoglucomutase/phosphomannomutase, C-terminal domain protein [KO:K15778] [EC:5.4.2.8 5.4.2.2]
D560_0442  prs; ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
D560_3508  purF; amidophosphoribosyltransferase [KO:K00764] [EC:2.4.2.14]
D560_0027  purD; phosphoribosylamine--glycine ligase [KO:K01945] [EC:6.3.4.13]
D560_3277  purN; phosphoribosylglycinamide formyltransferase [KO:K11175] [EC:2.1.2.2]
D560_1837  purT; phosphoribosylglycinamide formyltransferase 2 [KO:K08289] [EC:6.3.1.21]
D560_3871  cobB/CobQ-like glutamine amidotransferase domain protein [KO:K01952] [EC:6.3.5.3]
D560_1010  purM; phosphoribosylformylglycinamidine cyclo-ligase [KO:K01933] [EC:6.3.3.1]
D560_3076  purK; phosphoribosylaminoimidazole carboxylase, ATPase subunit [KO:K01589] [EC:6.3.4.18]
D560_3075  purE; phosphoribosylaminoimidazole carboxylase, catalytic subunit [KO:K01588] [EC:5.4.99.18]
D560_3074  purC; phosphoribosylaminoimidazolesuccinocarboxamide synthase [KO:K01923] [EC:6.3.2.6]
D560_2640  purB; adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
D560_0307  purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase [KO:K00602] [EC:2.1.2.3 3.5.4.10]
D560_1847  apt; adenine phosphoribosyltransferase [KO:K00759] [EC:2.4.2.7]
D560_3705  surE; 5'/3'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
D560_2433  multi-copper polyphenol oxidoreductase laccase family protein [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D560_3846  guaB; inosine-5'-monophosphate dehydrogenase [KO:K00088] [EC:1.1.1.205]
D560_0698  nucleoside diphosphate kinase family protein [KO:K00940] [EC:2.7.4.6]
D560_3655  rdgB; non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family [KO:K01519] [EC:3.6.1.66]
D560_3481  glutamine amidotransferase class-I family protein [KO:K01951] [EC:6.3.5.2]
D560_3845  guaA; GMP synthase, glutamine-hydrolyzing [KO:K01951] [EC:6.3.5.2]
D560_3671  gmk; guanylate kinase [KO:K00942] [EC:2.7.4.8]
D560_1996  ribonucleoside-diphosphate reductase, alpha subunit [KO:K00525] [EC:1.17.4.1]
D560_1995  ribonucleotide reductase, small chain family protein [KO:K00526] [EC:1.17.4.1]
D560_1472  dgt; dGTPase family protein [KO:K01129] [EC:3.1.5.1]
D560_3673  relA/SpoT family protein [KO:K01139] [EC:2.7.6.5 3.1.7.2]
D560_3140  ppx/GppA phosphatase family protein [KO:K01524] [EC:3.6.1.11 3.6.1.40]
D560_2288  relA/SpoT family protein [KO:K00951] [EC:2.7.6.5]
D560_2188  purA; adenylosuccinate synthase [KO:K01939] [EC:6.3.4.4]
D560_1984  pfkB carbohydrate kinase family protein [KO:K00856] [EC:2.7.1.20]
D560_3668  amn; AMP nucleosidase [KO:K01241] [EC:3.2.2.4]
D560_0849  add; adenosine deaminase [KO:K21053] [EC:3.5.4.2]
D560_2713  adk; adenylate kinase [KO:K00939] [EC:2.7.4.3]
D560_1600  calcineurin-like phosphoesterase family protein [KO:K03651] [EC:3.1.4.53]
D560_1970  apaH; diadenosine tetraphosphatase [KO:K01525] [EC:3.6.1.41]
D560_2509  cysN; sulfate adenylyltransferase, large subunit [KO:K00956] [EC:2.7.7.4]
D560_2508  cysD; sulfate adenylyltransferase, small subunit [KO:K00957] [EC:2.7.7.4]
D560_3852  FAD binding domain protein [KO:K22879] [EC:1.14.13.113]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
bho00030  Pentose phosphate pathway
bho00220  Arginine biosynthesis
bho00250  Alanine, aspartate and glutamate metabolism
bho00260  Glycine, serine and threonine metabolism
bho00340  Histidine metabolism
bho00630  Glyoxylate and dicarboxylate metabolism
bho00730  Thiamine metabolism
bho00740  Riboflavin metabolism
bho00790  Folate biosynthesis
KO pathway
ko00230   
LinkDB

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