KEGG   PATHWAY: char00190
Entry
char00190                   Pathway                                
Name
Oxidative phosphorylation - Clupea harengus (Atlantic herring)
Class
Metabolism; Energy metabolism
Pathway map
char00190  Oxidative phosphorylation
char00190

Module
char_M00142  NADH:ubiquinone oxidoreductase, mitochondria [PATH:char00190]
char_M00143  NADH dehydrogenase (ubiquinone) Fe-S protein/flavoprotein complex, mitochondria [PATH:char00190]
char_M00146  NADH dehydrogenase (ubiquinone) 1 alpha subcomplex [PATH:char00190]
char_M00148  Succinate dehydrogenase (ubiquinone) [PATH:char00190]
char_M00151  Cytochrome bc1 complex respiratory unit [PATH:char00190]
char_M00152  Cytochrome bc1 complex [PATH:char00190]
char_M00160  V-type ATPase, eukaryotes [PATH:char00190]
Organism
Clupea harengus (Atlantic herring) [GN:char]
Gene
5228442  ND1; NADH dehydrogenase subunit 1 [KO:K03878] [EC:7.1.1.2]
5228444  ND2; NADH dehydrogenase subunit 2 [KO:K03879] [EC:7.1.1.2]
5228439  ND3; NADH dehydrogenase subunit 3 [KO:K03880] [EC:7.1.1.2]
5228441  ND4; NADH dehydrogenase subunit 4 [KO:K03881] [EC:7.1.1.2]
5228437  ND4L; NADH dehydrogenase subunit 4L [KO:K03882] [EC:7.1.1.2]
5228445  ND5; NADH dehydrogenase subunit 5 [KO:K03883] [EC:7.1.1.2]
5228436  ND6; NADH dehydrogenase subunit 6 [KO:K03884] [EC:7.1.1.2]
105908015  NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial-like isoform X1 [KO:K03934] [EC:7.1.1.2]
105907369  ndufs1; NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial [KO:K03934] [EC:7.1.1.2]
105912808  ndufs2; NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial [KO:K03935] [EC:7.1.1.2]
105892658  ndufs3; NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial [KO:K03936] [EC:7.1.1.2]
105901140  ndufs4; NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [KO:K03937]
105889627  ndufs5; NADH dehydrogenase [ubiquinone] iron-sulfur protein 5 [KO:K03938]
105892021  ndufs6; NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [KO:K03939]
105900583  NADH-quinone oxidoreductase subunit B 2-like [KO:K03940] [EC:7.1.1.2]
122129096  ndufs7; NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial [KO:K03940] [EC:7.1.1.2]
122131849  NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial-like [KO:K03941] [EC:7.1.1.2]
122132741  NADH-ubiquinone oxidoreductase subunit 8-like [KO:K03941] [EC:7.1.1.2]
105906002  ndufs8b; NADH-ubiquinone oxidoreductase subunit 8 [KO:K03941] [EC:7.1.1.2]
105902023  ndufv1; NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial [KO:K03942] [EC:7.1.1.2]
105913003  NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial-like [KO:K03942] [EC:7.1.1.2]
105889533  ndufv2; NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial [KO:K03943] [EC:7.1.1.2]
105913093  ndufa1; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [KO:K03945]
105904608  ndufa2; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [KO:K03946]
105896166  ndufa3; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3 [KO:K03947]
105898660  ndufa4a; cytochrome c oxidase subunit NDUFA4L [KO:K03948]
105912217  NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 4-like 2 [KO:K03948]
116218704  cytochrome c oxidase subunit NDUFA4-like [KO:K03948]
116218722  cytochrome c oxidase subunit NDUFA4-like [KO:K03948]
105902242  ndufa4b; cytochrome c oxidase subunit NDUFA4 [KO:K03948]
105896714  ndufa5; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 [KO:K03949]
105898747  ndufa6; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 [KO:K03950]
105910767  ndufa7; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 [KO:K03951]
105894657  ndufa8; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 [KO:K03952]
105895674  ndufa9a; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial [KO:K03953]
105901015  ndufa10; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial [KO:K03954]
105900004  ndufab1b; NADH:ubiquinone oxidoreductase subunit AB1b [KO:K03955]
105892750  ndufab1a; NADH:ubiquinone oxidoreductase subunit AB1a isoform X1 [KO:K03955]
105900954  ndufa11; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11 [KO:K03956]
105912753  NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12-like [KO:K11352]
105912759  NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12-like [KO:K11352]
105909241  ndufa13; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 [KO:K11353]
105896736  ndufb2; NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial [KO:K03958]
105908707  ndufb3; NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 [KO:K03959]
122130878  ndufb4; NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4 [KO:K03960]
105912945  ndufb5; NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial [KO:K03961]
105903943  ndufb6; NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 6 [KO:K03962]
105891266  ndufb7; NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 [KO:K03963]
105903362  ndufb8; NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [KO:K03964]
105909055  ndufb9; NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 [KO:K03965]
105891683  ndufb10; NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 [KO:K03966]
105893650  ndufb11; NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial [KO:K11351]
105906276  ndufc1; NADH dehydrogenase [ubiquinone] 1 subunit C1, mitochondrial [KO:K03967]
105903214  ndufc2; NADH dehydrogenase [ubiquinone] 1 subunit C2 [KO:K03968]
105909048  sdha; succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial [KO:K00234] [EC:1.3.5.1]
122129471  succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial-like [KO:K00234] [EC:1.3.5.1]
105898957  succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial-like [KO:K00235] [EC:1.3.5.1]
105905141  sdhb; succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial [KO:K00235] [EC:1.3.5.1]
105898488  sdhc; succinate dehydrogenase cytochrome b560 subunit, mitochondrial isoform X2 [KO:K00236]
105893756  sdhdb; succinate dehydrogenase [ubiquinone] cytochrome b small subunit B, mitochondrial [KO:K00237]
105906625  sdhda; succinate dehydrogenase [ubiquinone] cytochrome b small subunit A, mitochondrial [KO:K00237]
105889141  cytochrome b-c1 complex subunit Rieske, mitochondrial [KO:K00411] [EC:7.1.1.8]
105905159  cytochrome b-c1 complex subunit Rieske, mitochondrial-like [KO:K00411] [EC:7.1.1.8]
5228446  CYTB; cytochrome b [KO:K00412]
105897947  cytochrome c1, heme protein, mitochondrial [KO:K00413]
122132100  cytochrome c1, heme protein, mitochondrial-like isoform X1 [KO:K00413]
105912262  cytochrome b-c1 complex subunit 1, mitochondrial [KO:K00414]
122130085  cytochrome b-c1 complex subunit 2, mitochondrial isoform X1 [KO:K00415]
105898829  cytochrome b-c1 complex subunit 2, mitochondrial [KO:K00415]
105895153  cytochrome b-c1 complex subunit 6, mitochondrial isoform X1 [KO:K00416]
105905342  cytochrome b-c1 complex subunit 7 [KO:K00417]
105904295  cytochrome b-c1 complex subunit 8 [KO:K00418]
105911774  cytochrome b-c1 complex subunit 9 [KO:K00419]
122130576  cytochrome b-c1 complex subunit 10-like [KO:K00420]
105905906  cytochrome b-c1 complex subunit 10-like [KO:K00420]
116219522  cytochrome b-c1 complex subunit 10-like [KO:K00420]
105904250  protoheme IX farnesyltransferase, mitochondrial [KO:K02257] [EC:2.5.1.141]
5228434  COX3; cytochrome c oxidase subunit III [KO:K02262]
5228438  COX1; cytochrome c oxidase subunit I [KO:K02256] [EC:7.1.1.9]
5228440  COX2; cytochrome c oxidase subunit II [KO:K02261]
105889309  cytochrome c oxidase subunit 4 isoform 1, mitochondrial [KO:K02263]
105892933  cytochrome c oxidase subunit 4 isoform 1, mitochondrial [KO:K02263]
105894313  cytochrome c oxidase subunit 4 isoform 2, mitochondrial [KO:K02263]
105912564  cytochrome c oxidase subunit 5A, mitochondrial [KO:K02264]
105912624  cytochrome c oxidase subunit 5A, mitochondrial-like [KO:K02264]
105890939  cytochrome c oxidase subunit 5B, mitochondrial [KO:K02265]
105913446  cytochrome c oxidase subunit 5B, mitochondrial [KO:K02265]
105897668  cytochrome c oxidase subunit 6A, mitochondrial [KO:K02266]
105899094  cytochrome c oxidase subunit 6A, mitochondrial [KO:K02266]
105903307  cytochrome c oxidase subunit 6B1 [KO:K02267]
105905520  cytochrome c oxidase subunit 6B1 [KO:K02267]
105901862  cytochrome c oxidase subunit 6C-1 [KO:K02268]
105897050  cytochrome c oxidase subunit 7A2, mitochondrial [KO:K02270]
105909457  cytochrome c oxidase subunit 7A2, mitochondrial-like [KO:K02270]
105900042  cytochrome c oxidase subunit 7A-related protein, mitochondrial [KO:K02270]
105900712  cytochrome c oxidase subunit 7A2, mitochondrial [KO:K02270]
105890523  cytochrome c oxidase subunit 7B, mitochondrial [KO:K02271]
105897046  si:dkey-85n7.8; COX8 domain-containing protein [KO:K02273]
105911288  cytochrome c oxidase subunit 8B, mitochondrial [KO:K02273]
105894555  cytochrome c oxidase subunit 8B, mitochondrial [KO:K02273]
105907487  cytochrome c oxidase assembly protein COX11, mitochondrial [KO:K02258]
122129945  cytochrome c oxidase assembly protein COX15 homolog [KO:K02259] [EC:1.17.99.9]
105900835  cytochrome c oxidase assembly protein COX15 homolog [KO:K02259] [EC:1.17.99.9]
105913282  cytochrome c oxidase copper chaperone [KO:K02260]
105908048  cytochrome c iso-1/iso-2 [KO:K08738]
105911849  cytochrome c [KO:K08738]
105911103  atp5fa1; ATP synthase subunit alpha, mitochondrial [KO:K02132]
122131670  atp5f1b; ATP synthase subunit beta, mitochondrial [KO:K02133] [EC:7.1.2.2]
105898365  atp5f1c; ATP synthase subunit gamma, mitochondrial isoform X2 [KO:K02136]
105895246  atp5f1d; ATP synthase subunit delta, mitochondrial [KO:K02134]
105910061  ATP synthase subunit epsilon, mitochondrial [KO:K02135]
105904181  ATP synthase subunit epsilon, mitochondrial [KO:K02135]
122132913  atp5f1e; ATP synthase subunit epsilon, mitochondrial [KO:K02135]
105899357  ATP synthase subunit O, mitochondrial [KO:K02137]
122133486  atp5po; ATP synthase subunit O, mitochondrial [KO:K02137]
5228435  ATP6; ATP synthase F0 subunit 6 [KO:K02126]
105897359  atp5pb; ATP synthase F(0) complex subunit B1, mitochondrial [KO:K02127]
105908030  atp5mc3a; ATP synthase membrane subunit c locus 3a [KO:K02128]
105912613  ATP synthase F(0) complex subunit C2, mitochondrial-like [KO:K02128]
105912853  atp5mc1; ATP synthase F(0) complex subunit C1, mitochondrial isoform X1 [KO:K02128]
105898650  ATP synthase F(0) complex subunit C2, mitochondrial-like [KO:K02128]
105910939  atp5pd; ATP synthase subunit d, mitochondrial [KO:K02138]
122129262  atp5mf; ATP synthase subunit f, mitochondrial [KO:K02130]
122132115  atp5l; ATP synthase subunit g, mitochondrial [KO:K02140]
105893300  atp5pf; ATP synthase-coupling factor 6, mitochondrial [KO:K02131]
5228443  ATP8; ATP synthase F0 subunit 8 [KO:K02125]
105890242  atp6v1ab; V-type proton ATPase catalytic subunit A [KO:K02145] [EC:7.1.2.2]
105890663  atp6v1b2; V-type proton ATPase subunit B, brain isoform [KO:K02147]
105890958  atp6v1ba; V-type proton ATPase subunit B, kidney isoform [KO:K02147]
105893146  atp6v1c2; V-type proton ATPase subunit C 1-B isoform X1 [KO:K02148]
105894896  atp6v1c1a; V-type proton ATPase subunit C 1-A [KO:K02148]
105907698  atp6v1c1b; V-type proton ATPase subunit C 1-B [KO:K02148]
105907319  atp6v1d; V-type proton ATPase subunit D [KO:K02149]
122132242  atp6v1e1b; V-type proton ATPase subunit E 1 [KO:K02150]
105904114  atp6v1f; V-type proton ATPase subunit F [KO:K02151]
122129541  atp6v1g1; V-type proton ATPase subunit G 1 [KO:K02152]
122131853  V-type proton ATPase subunit H-like isoform X1 [KO:K02144]
105908477  tcirg1a; V-type proton ATPase 116 kDa subunit a3 [KO:K02154]
105908752  tcirg1b; T cell immune regulator 1, ATPase H+ transporting V0 subunit a3b isoform X1 [KO:K02154]
105895501  atp6v0a2a; V-type proton ATPase 116 kDa subunit a2 [KO:K02154]
105896807  atp6v0a2b; V-type proton ATPase 116 kDa subunit a [KO:K02154]
105890791  atp6v0a1a; V-type proton ATPase 116 kDa subunit a isoform X4 [KO:K02154]
105905410  atp6v0a1b; V-type proton ATPase 116 kDa subunit a isoform X1 [KO:K02154]
105908588  atp6v0cb; ATPase H+ transporting V0 subunit cb [KO:K02155]
105890766  atp6v0ca; ATPase H+ transporting V0 subunit ca [KO:K02155]
105899330  atp6v0b; V-type proton ATPase 21 kDa proteolipid subunit [KO:K03661]
105899796  atp6v0d1; V-type proton ATPase subunit d 1 [KO:K02146]
105898432  V-type proton ATPase subunit e 1 [KO:K02153]
116220839  V-type proton ATPase subunit e 1-like [KO:K02153]
105906503  atpv0e2; ATPase H+ transporting V0 subunit e2 [KO:K02153]
105900174  atp6ap1a; ATPase H+ transporting accessory protein 1a [KO:K03662]
105906875  atp6ap1b; V-type proton ATPase subunit S1b [KO:K03662]
105891898  potassium-transporting ATPase alpha chain 1 [KO:K01542] [EC:7.2.2.19]
105896508  potassium-transporting ATPase subunit beta [KO:K01543] [EC:7.2.2.19]
105910157  ppa1b; inorganic pyrophosphatase [KO:K01507] [EC:3.6.1.1]
105903990  ppa2; inorganic pyrophosphatase 2, mitochondrial [KO:K01507] [EC:3.6.1.1]
116218653  ppa1a; inorganic pyrophosphatase 2, mitochondrial [KO:K01507] [EC:3.6.1.1]
122131900  phospholysine phosphohistidine inorganic pyrophosphate phosphatase [KO:K11725] [EC:3.6.1.1 3.1.3.-]
Compound
C00001  H2O
C00002  ATP
C00003  NAD+
C00004  NADH
C00007  Oxygen
C00008  ADP
C00009  Orthophosphate
C00013  Diphosphate
C00042  Succinate
C00080  H+
C00122  Fumarate
C00536  Triphosphate
Reference
PMID:16469879
  Authors
Sazanov LA, Hinchliffe P.
  Title
Structure of the hydrophilic domain of respiratory complex I from Thermus thermophilus.
  Journal
Science 311:1430-6 (2006)
DOI:10.1126/science.1123809
Reference
PMID:16584177
  Authors
Hinchliffe P, Carroll J, Sazanov LA.
  Title
Identification of a novel subunit of respiratory complex I from Thermus thermophilus.
  Journal
Biochemistry 45:4413-20 (2006)
DOI:10.1021/bi0600998
KO pathway
ko00190   
LinkDB

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