KEGG   PATHWAY: dba00230
Entry
dba00230                    Pathway                                
Name
Purine metabolism - Desulfomicrobium baculatum
Class
Metabolism; Nucleotide metabolism
Pathway map
dba00230  Purine metabolism
dba00230

Module
dba_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:dba00230]
dba_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:dba00230]
dba_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:dba00230]
dba_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:dba00230]
Other DBs
GO: 0006163 0042278
Organism
Desulfomicrobium baculatum [GN:dba]
Gene
Dbac_0641  phosphopentomutase [KO:K01839] [EC:5.4.2.7]
Dbac_0755  phosphoglucomutase, alpha-D-glucose phosphate-specific [KO:K01835] [EC:5.4.2.2]
Dbac_0673  ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
Dbac_3212  amidophosphoribosyltransferase [KO:K00764] [EC:2.4.2.14]
Dbac_0266  phosphoribosylamine/glycine ligase [KO:K01945] [EC:6.3.4.13]
Dbac_2448  phosphoribosylglycinamide formyltransferase [KO:K11175] [EC:2.1.2.2]
Dbac_1966  phosphoribosylglycinamide formyltransferase 2 [KO:K08289] [EC:6.3.1.21]
Dbac_0157  Phosphoribosylformylglycinamidine synthase [KO:K23265] [EC:6.3.5.3 3.5.1.2]
Dbac_3013  Phosphoribosylformylglycinamidine synthase [KO:K23270] [EC:6.3.5.3]
Dbac_0046  phosphoribosylformylglycinamidine cyclo-ligase [KO:K01933] [EC:6.3.3.1]
Dbac_3083  phosphoribosylaminoimidazole carboxylase, ATPase subunit [KO:K01589] [EC:6.3.4.18]
Dbac_0265  phosphoribosylaminoimidazole carboxylase, catalytic subunit [KO:K01588] [EC:5.4.99.18]
Dbac_3084  phosphoribosylaminoimidazole carboxylase, catalytic subunit [KO:K01588] [EC:5.4.99.18]
Dbac_0308  phosphoribosylaminoimidazole-succinocarboxamides ynthase [KO:K01923] [EC:6.3.2.6]
Dbac_3102  adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
Dbac_3020  Phosphoribosylaminoimidazolecarboxamideformyltra nsferase [KO:K00602] [EC:2.1.2.3 3.5.4.10]
Dbac_1176  metallophosphoesterase [KO:K11751] [EC:3.1.3.5 3.6.1.45]
Dbac_0558  5'-nucleotidase/2' 3'-cyclic phosphodiesterase and related esterase-like protein [KO:K11751] [EC:3.1.3.5 3.6.1.45]
Dbac_0091  stationary-phase survival protein SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
Dbac_0320  inosine guanosine and xanthosine phosphorylase family [KO:K03783] [EC:2.4.2.1]
Dbac_0761  protein of unknown function DUF1255 [KO:K09913] [EC:2.4.2.1 2.4.2.2]
Dbac_0693  protein of unknown function DUF152 [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
Dbac_1856  hypoxanthine phosphoribosyltransferase [KO:K00760] [EC:2.4.2.8]
Dbac_2497  inosine-5'-monophosphate dehydrogenase [KO:K00088] [EC:1.1.1.205]
Dbac_2890  Nucleoside-diphosphate kinase [KO:K00940] [EC:2.7.4.6]
Dbac_0541  protein of unknown function DUF84 [KO:K01529] [EC:3.6.1.73]
Dbac_2834  non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family [KO:K01519] [EC:3.6.1.66]
Dbac_3234  Xanthine phosphoribosyltransferase [KO:K00769] [EC:2.4.2.22]
Dbac_2496  GMP synthase, large subunit [KO:K01951] [EC:6.3.5.2]
Dbac_2902  guanylate kinase [KO:K00942] [EC:2.7.4.8]
Dbac_3117  ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent [KO:K00525] [EC:1.17.4.1]
Dbac_3397  anaerobic ribonucleoside-triphosphate reductase [KO:K21636] [EC:1.1.98.6]
Dbac_0431  (p)ppGpp synthetase I, SpoT/RelA [KO:K01139] [EC:2.7.6.5 3.1.7.2]
Dbac_0452  RelA/SpoT domain protein [KO:K07816] [EC:2.7.6.5]
Dbac_0632  metal dependent phosphohydrolase [KO:K01768] [EC:4.6.1.1]
Dbac_1617  adenylate cyclase [KO:K05873] [EC:4.6.1.1]
Dbac_3019  adenylosuccinate synthetase [KO:K01939] [EC:6.3.4.4]
Dbac_1063  adenine deaminase [KO:K01486] [EC:3.5.4.2]
Dbac_3372  metallophosphoesterase [KO:K09769] [EC:3.1.4.16]
Dbac_0784  adenylate kinase [KO:K00939] [EC:2.7.4.3]
Dbac_0509  MazG family protein [KO:K04765] [EC:3.6.1.9]
Dbac_1462  histidine triad (HIT) protein [KO:K19710] [EC:2.7.7.53]
Dbac_3196  sulfate adenylyltransferase [KO:K00958] [EC:2.7.7.4]
Dbac_2177  carbamate kinase [KO:K00926] [EC:2.7.2.2]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
dba00030  Pentose phosphate pathway
dba00220  Arginine biosynthesis
dba00250  Alanine, aspartate and glutamate metabolism
dba00260  Glycine, serine and threonine metabolism
dba00340  Histidine metabolism
dba00630  Glyoxylate and dicarboxylate metabolism
dba00730  Thiamine metabolism
dba00740  Riboflavin metabolism
dba00790  Folate biosynthesis
KO pathway
ko00230   
LinkDB

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