KEGG   PATHWAY: dic00230
Entry
dic00230                    Pathway                                
Name
Purine metabolism - Dickeya poaceiphila
Class
Metabolism; Nucleotide metabolism
Pathway map
dic00230  Purine metabolism
dic00230

Module
dic_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:dic00230]
dic_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:dic00230]
dic_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:dic00230]
dic_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:dic00230]
dic_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:dic00230]
Other DBs
GO: 0006163 0042278
Organism
Dickeya poaceiphila [GN:dic]
Gene
Dpoa569_003627  ADP-ribose diphosphatase [KO:K01515] [EC:3.6.1.13 3.6.1.-]
Dpoa569_000346  nudE; ADP compounds hydrolase NudE [KO:K08312] [EC:3.6.1.-]
Dpoa569_003315  deoB; phosphopentomutase [KO:K01839] [EC:5.4.2.7]
Dpoa569_002557  alpha-D-glucose phosphate-specific phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
Dpoa569_001870  ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
Dpoa569_001122  purF; amidophosphoribosyltransferase [KO:K00764] [EC:2.4.2.14]
Dpoa569_000221  purD; phosphoribosylamine--glycine ligase [KO:K01945] [EC:6.3.4.13]
Dpoa569_001196  purN; phosphoribosylglycinamide formyltransferase [KO:K11175] [EC:2.1.2.2]
Dpoa569_002623  purN; phosphoribosylglycinamide formyltransferase [KO:K11175] [EC:2.1.2.2]
Dpoa569_002019  purT; formate-dependent phosphoribosylglycinamide formyltransferase [KO:K08289] [EC:6.3.1.21]
Dpoa569_000898  purL; phosphoribosylformylglycinamidine synthase [KO:K01952] [EC:6.3.5.3]
Dpoa569_002622  purM; phosphoribosylformylglycinamidine cyclo-ligase [KO:K01933] [EC:6.3.3.1]
Dpoa569_000996  purK; 5-(carboxyamino)imidazole ribonucleotide synthase [KO:K01589] [EC:6.3.4.18]
Dpoa569_000997  purE; 5-(carboxyamino)imidazole ribonucleotide mutase [KO:K01588] [EC:5.4.99.18]
Dpoa569_002612  purC; phosphoribosylaminoimidazolesuccinocarboxamide synthase [KO:K01923] [EC:6.3.2.6]
Dpoa569_001790  purB; adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
Dpoa569_000273  adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
Dpoa569_000222  purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase [KO:K00602] [EC:2.1.2.3 3.5.4.10]
Dpoa569_002671  adenine phosphoribosyltransferase [KO:K00759] [EC:2.4.2.7]
Dpoa569_002663  bifunctional UDP-sugar hydrolase/5'-nucleotidase [KO:K11751] [EC:3.1.3.5 3.6.1.45]
Dpoa569_000344  GMP/IMP nucleotidase [KO:K20881] [EC:3.1.3.-]
Dpoa569_003314  deoD; purine-nucleoside phosphorylase [KO:K03784] [EC:2.4.2.1]
Dpoa569_002744  ppnP; pyrimidine/purine nucleoside phosphorylase [KO:K09913] [EC:2.4.2.1 2.4.2.2]
Dpoa569_003048  pgeF; polyphenol oxidase [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
Dpoa569_000833  hypoxanthine phosphoribosyltransferase [KO:K00760] [EC:2.4.2.8]
Dpoa569_000940  guaB; IMP dehydrogenase [KO:K00088] [EC:1.1.1.205]
Dpoa569_000927  nucleoside-diphosphate kinase [KO:K00940] [EC:2.7.4.6]
Dpoa569_001192  DUF84 family protein [KO:K01529] [EC:3.6.1.73]
Dpoa569_000524  yjjX; non-canonical purine NTP phosphatase [KO:K01529] [EC:3.6.1.73]
Dpoa569_000708  rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase [KO:K01519] [EC:3.6.1.66]
Dpoa569_002992  xanthine phosphoribosyltransferase [KO:K00769] [EC:2.4.2.22]
Dpoa569_000941  guaA; glutamine-hydrolyzing GMP synthase [KO:K01951] [EC:6.3.5.2]
Dpoa569_001172  glutamine amidotransferase [KO:K01951] [EC:6.3.5.2]
Dpoa569_000617  GMP reductase [KO:K00364] [EC:1.7.1.7]
Dpoa569_001668  guaD; guanine deaminase [KO:K01487] [EC:3.5.4.3]
Dpoa569_000041  guanylate kinase [KO:K00942] [EC:2.7.4.8]
Dpoa569_002653  nrdA; ribonucleoside-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
Dpoa569_002654  nrdB; ribonucleotide-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
Dpoa569_003588  nrdD; anaerobic ribonucleoside-triphosphate reductase [KO:K21636] [EC:1.1.98.6]
Dpoa569_000853  dGTPase [KO:K01129] [EC:3.1.5.1]
Dpoa569_001138  5'-deoxynucleotidase [KO:K08722] [EC:3.1.3.89]
Dpoa569_000039  spoT; bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase [KO:K01139] [EC:2.7.6.5 3.1.7.2]
Dpoa569_000988  ppx; exopolyphosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
Dpoa569_000251  ppx; exopolyphosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
Dpoa569_000785  relA; GTP diphosphokinase [KO:K00951] [EC:2.7.6.5]
Dpoa569_000283  class I adenylate cyclase [KO:K05851] [EC:4.6.1.1]
Dpoa569_002242  cyaB; class IV adenylate cyclase [KO:K05873] [EC:4.6.1.1]
Dpoa569_000495  adenylosuccinate synthase [KO:K01939] [EC:6.3.4.4]
Dpoa569_001929  adenosine deaminase [KO:K01488] [EC:3.5.4.4]
Dpoa569_002452  AMP nucleosidase [KO:K01241] [EC:3.2.2.4]
Dpoa569_002806  LOG family protein [KO:K06966] [EC:3.2.2.10 3.2.2.-]
Dpoa569_000738  bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase [KO:K01119] [EC:3.1.4.16 3.1.3.6]
Dpoa569_002666  adenylate kinase [KO:K00939] [EC:2.7.4.3]
Dpoa569_000786  mazG; nucleoside triphosphate pyrophosphohydrolase [KO:K04765] [EC:3.6.1.9]
Dpoa569_003261  phosphodiesterase [KO:K03651] [EC:3.1.4.53]
Dpoa569_003625  cpdA; 3',5'-cyclic-AMP phosphodiesterase [KO:K03651] [EC:3.1.4.53]
Dpoa569_000561  apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [KO:K01525] [EC:3.6.1.41]
Dpoa569_000798  cysC; adenylyl-sulfate kinase [KO:K00860] [EC:2.7.1.25]
Dpoa569_000797  cysN; sulfate adenylyltransferase subunit CysN [KO:K00956] [EC:2.7.7.4]
Dpoa569_000796  cysD; sulfate adenylyltransferase subunit CysD [KO:K00957] [EC:2.7.7.4]
Dpoa569_003023  hpxA; allantoin racemase [KO:K16841] [EC:5.1.99.3]
Dpoa569_003022  puuE; allantoinase PuuE [KO:K16842] [EC:3.5.2.5]
Dpoa569_003009  hpxK; allantoate amidohydrolase [KO:K02083] [EC:3.5.3.9]
Dpoa569_003010  alanine--glyoxylate aminotransferase family protein [KO:K00839] [EC:2.6.1.112]
Dpoa569_003018  AtzE family amidohydrolase [KO:K22601] [EC:2.1.3.5]
Dpoa569_003016  gamma-glutamyltransferase family protein [KO:K22602] [EC:3.5.1.126]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
dic00030  Pentose phosphate pathway
dic00220  Arginine biosynthesis
dic00250  Alanine, aspartate and glutamate metabolism
dic00260  Glycine, serine and threonine metabolism
dic00340  Histidine metabolism
dic00630  Glyoxylate and dicarboxylate metabolism
dic00730  Thiamine metabolism
dic00740  Riboflavin metabolism
dic00790  Folate biosynthesis
KO pathway
ko00230   
LinkDB

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