KEGG   PATHWAY: eok00240
Entry
eok00240                    Pathway                                
Name
Pyrimidine metabolism - Escherichia coli O55:H7 CB9615 (EPEC)
Class
Metabolism; Nucleotide metabolism
Pathway map
eok00240  Pyrimidine metabolism
eok00240

Module
eok_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:eok00240]
eok_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:eok00240]
eok_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:eok00240]
eok_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:eok00240]
eok_M00939  Pyrimidine degradation, uracil => 3-hydroxypropanoate [PATH:eok00240]
Other DBs
GO: 0006220 0006213
Organism
Escherichia coli O55:H7 CB9615 (EPEC) [GN:eok]
Gene
G2583_0034  carB; Carbamoyl-phosphate synthase large chain [KO:K01955] [EC:6.3.5.5]
G2583_0033  carA; Carbamoylphosphate synthase small subunit [KO:K01956] [EC:6.3.5.5]
G2583_5075  pyrB; Aspartate carbamoyltransferase [KO:K00609] [EC:2.1.3.2]
G2583_5074  pyrI; Aspartate carbamoyltransferase regulatory chain [KO:K00610]
G2583_1321  pyrC; Dihydroorotase [KO:K01465] [EC:3.5.2.3]
G2583_1180  pyrD; Dihydroorotate dehydrogenase [KO:K00254] [EC:1.3.5.2]
G2583_4378  pyrE; Orotate phosphoribosyltransferase [KO:K00762] [EC:2.4.2.10]
G2583_1622  pyrF; Orotidine 5'-phosphate decarboxylase [KO:K01591] [EC:4.1.1.23]
G2583_0174  pyrH; UMP kinase [KO:K09903] [EC:2.7.4.22]
G2583_3043  ndk; Nucleoside diphosphate kinase [KO:K00940] [EC:2.7.4.6]
G2583_3433  mazG; Nucleoside triphosphate pyrophosphohydrolase [KO:K04765] [EC:3.6.1.9]
G2583_3967  yhdE; Maf-like protein yhdE [KO:K06287] [EC:3.6.1.-]
G2583_3809  ygjP; hypothetical protein [KO:K07043] [EC:3.6.1.-]
G2583_3432  pyrG; CTP synthase [KO:K01937] [EC:6.3.4.2]
G2583_1145  cmk; Cytidylate kinase [KO:K00945] [EC:2.7.4.25]
G2583_2205  nudG; CTP pyrophosphohydrolase [KO:K08320] [EC:3.6.1.65]
G2583_2591  udk; Uridine/cytidine kinase [KO:K00876] [EC:2.7.1.48]
G2583_0592  ushA; UDP-sugar hydrolase/5'-nucleotidase [KO:K11751] [EC:3.1.3.5 3.6.1.45]
G2583_3392  surE; Multifunctional protein surE [Includes: 5'/3'-nucleotidase (Nucleoside monophosphate phosphohydrolase)] [KO:K03787] [EC:3.1.3.5 3.1.3.6]
G2583_0836  nagD; UMP phosphatase [KO:K02566] [EC:3.1.3.5]
G2583_5175  yjjG; 5'-nucleotidase yjjG [KO:K08723] [EC:3.1.3.-]
G2583_4631  udp; Uridine phosphorylase [KO:K00757] [EC:2.4.2.3]
G2583_0499  yaiE; UPF0345 protein yaiE [KO:K09913] [EC:2.4.2.1 2.4.2.2]
G2583_3021  upp; Uracil phosphoribosyltransferase [KO:K00761] [EC:2.4.2.9]
G2583_5043  cpdB; 2,3-cyclic-nucleotide 2-phosphodiesterase [KO:K01119] [EC:3.1.4.16 3.1.3.6]
G2583_2709  yeiC; Kinase, pfkB family protein [KO:K16328] [EC:2.7.1.83]
G2583_2708  yeiN; Indigoidine synthase A like protein [KO:K16329] [EC:4.2.1.70]
G2583_2705  rihB; Pyrimidine-specific ribonucleoside hydrolase rihB [KO:K10213] [EC:3.2.2.8]
G2583_0814  rihA; Pyrimidine-specific ribonucleoside hydrolase rihA [KO:K01250] [EC:3.2.2.-]
G2583_0031  rihC; Non-specific ribonucleoside hydrolase rihC [KO:K12700] [EC:3.2.2.-]
G2583_3448  ygdH; hypothetical protein [KO:K06966] [EC:3.2.2.10 3.2.2.-]
G2583_2686  cdd; Cytidine deaminase [KO:K01489] [EC:3.5.4.5]
G2583_0448  codA; Cytosine deaminase and related metal-dependent hydrolase [KO:K01485] [EC:3.5.4.1 3.5.4.21]
G2583_5067  nrdD; Anaerobic ribonucleoside-triphosphate reductase [KO:K21636] [EC:1.1.98.6]
G2583_2590  dcd; Deoxycytidine triphosphate deaminase [KO:K01494] [EC:3.5.4.13]
G2583_3323  nrdE; Ribonucleoside-diphosphate reductase, alpha subunit [KO:K00525] [EC:1.17.4.1]
G2583_2772  nrdA; Ribonucleoside-diphosphate reductase, alpha subunit [KO:K00525] [EC:1.17.4.1]
G2583_2773  nrdB; Ribonucleoside-diphosphate reductase 1, beta subunit, B2 [KO:K00526] [EC:1.17.4.1]
G2583_3324  nrdF; Ribonucleoside-diphosphate reductase 2 subunit beta [KO:K00526] [EC:1.17.4.1]
G2583_2828  yfbR; 5'-nucleotidase yfbR [KO:K08722] [EC:3.1.3.89]
G2583_5180  yfdR; hypothetical protein [KO:K06952] [EC:3.1.3.89]
G2583_1358  tmk; Thymidylate kinase [KO:K00943] [EC:2.7.4.9]
G2583_4376  dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase [KO:K01520] [EC:3.6.1.23]
G2583_5242  deoA; Thymidine phosphorylase [KO:K00758] [EC:2.4.2.4]
G2583_1512  tdk; Thymidine kinase [KO:K00857] [EC:2.7.1.21]
G2583_3481  thyA; Thymidylate synthase [KO:K00560] [EC:2.1.1.45]
G2583_2689  yeiT; Uncharacterized oxidoreductase yeiT [KO:K17722] [EC:1.3.1.1]
G2583_2690  yeiA; putative oxidoreductase [KO:K17723] [EC:1.3.1.1]
G2583_3527  hyuA; D-phenylhydantoinase [KO:K01464] [EC:3.5.2.2]
G2583_1245  rutA; Putative monooxygenase rutA [KO:K09018] [EC:1.14.99.46]
G2583_1240  rutF; Flavin reductase domain protein FMN-binding protein [KO:K09024] [EC:1.5.1.-]
G2583_1244  rutB; Putative synthetase [KO:K09020] [EC:3.5.1.110]
G2583_1243  rutC; hypothetical protein [KO:K09021]
G2583_1242  rutD; putative acetyltransferase [KO:K09023] [EC:3.5.1.-]
G2583_1906  ydfG; L-allo-threonine dehydrogenase, NAD(P)-binding protein [KO:K16066] [EC:1.1.1.381 1.1.1.-]
G2583_1241  rutE; Putative NADH dehydrogenase/NAD(P)H nitroreductase rutE [KO:K09019] [EC:1.1.1.-]
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C00941  3',5'-Cyclic CMP
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
C22509  3',5'-Cyclic UMP
Related
pathway
eok00030  Pentose phosphate pathway
eok00220  Arginine biosynthesis
eok00250  Alanine, aspartate and glutamate metabolism
eok00280  Valine, leucine and isoleucine degradation
eok00410  beta-Alanine metabolism
KO pathway
ko00240   
LinkDB

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