KEGG   PATHWAY: ffu00260
Entry
ffu00260                    Pathway                                
Name
Glycine, serine and threonine metabolism - Fulvia fulva
Description
Serine is derived from 3-phospho-D-glycerate, an intermediate of glycolysis [MD:M00020], and glycine is derived from serine. Threonine is an essential amino acid, which animals cannot synthesize. In bacteria and plants, threonine is derived from aspartate [MD:M00018].
Class
Metabolism; Amino acid metabolism
Pathway map
ffu00260  Glycine, serine and threonine metabolism
ffu00260

Module
ffu_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:ffu00260]
ffu_M00338  Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:ffu00260]
ffu_M00621  Glycine cleavage system [PATH:ffu00260]
Other DBs
GO: 0006544 0006563 0070178 0006566
Organism
Fulvia fulva [GN:ffu]
Gene
CLAFUR5_07378  Aspartokinase [KO:K00928] [EC:2.7.2.4]
CLAFUR5_14517  putative aspartate-semialdehyde dehydrogenase [KO:K00133] [EC:1.2.1.11]
CLAFUR5_10507  Homoserine dehydrogenase [KO:K00003] [EC:1.1.1.3]
CLAFUR5_00950  Aldolase VrtJ [KO:K01620] [EC:4.1.2.48]
CLAFUR5_09618  Putative serine hydroxymethyltransferase, mitochondrial [KO:K00600] [EC:2.1.2.1]
CLAFUR5_13036  Serine hydroxymethyltransferase, cytosolic [KO:K00600] [EC:2.1.2.1]
CLAFUR5_13599  Alanine--glyoxylate aminotransferase 1 [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
CLAFUR5_01853  Alanine--glyoxylate aminotransferase 1 [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
CLAFUR5_12132  Glycerate kinase [KO:K00865] [EC:2.7.1.165]
CLAFUR5_12746  2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
CLAFUR5_12869  2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
CLAFUR5_07453  D-3-phosphoglycerate dehydrogenase 2 [KO:K00058] [EC:1.1.1.95 1.1.1.399]
CLAFUR5_00018  D-3-phosphoglycerate dehydrogenase 2, chloroplastic [KO:K00058] [EC:1.1.1.95 1.1.1.399]
CLAFUR5_03231  Phosphoserine aminotransferase [KO:K00831] [EC:2.6.1.52]
CLAFUR5_14494  Phosphoserine phosphatase [KO:K01079] [EC:3.1.3.3]
CLAFUR5_10996  NADP-dependent 3-hydroxy acid dehydrogenase [KO:K16066] [EC:1.1.1.381 1.1.1.-]
CLAFUR5_07667  5-aminolevulinate synthase, mitochondrial [KO:K00643] [EC:2.3.1.37]
CLAFUR5_09624  Amine oxidase [flavin-containing] B [KO:K00274] [EC:1.4.3.4]
CLAFUR5_04532  Primary amine oxidase, lung isozyme [KO:K00276] [EC:1.4.3.21]
CLAFUR5_07095  Copper amine oxidase 1 [KO:K00276] [EC:1.4.3.21]
CLAFUR5_09322  Copper amine oxidase 1 [KO:K00276] [EC:1.4.3.21]
CLAFUR5_09617  Copper amine oxidase 1 [KO:K00276] [EC:1.4.3.21]
CLAFUR5_10196  Glycine dehydrogenase (decarboxylating), mitochondrial [KO:K00281] [EC:1.4.4.2]
CLAFUR5_02040  putative aminomethyltransferase, mitochondrial [KO:K00605] [EC:2.1.2.10]
CLAFUR5_09149  Dihydrolipoyl dehydrogenase, mitochondrial [KO:K00382] [EC:1.8.1.4]
CLAFUR5_03746  Glycine cleavage system H protein, mitochondrial [KO:K02437]
CLAFUR5_05841  D-amino-acid oxidase [KO:K00273] [EC:1.4.3.3]
CLAFUR5_11024  D-amino-acid oxidase [KO:K00273] [EC:1.4.3.3]
CLAFUR5_04895  L-arginine:L-lysine amidinotransferase [KO:K00613] [EC:2.1.4.1]
CLAFUR5_01803  L-arginine:L-lysine amidinotransferase [KO:K00613] [EC:2.1.4.1]
CLAFUR5_12890  CDP-diacylglycerol--serine O-phosphatidyltransferase [KO:K17103] [EC:2.7.8.8]
CLAFUR5_10061  Betaine aldehyde dehydrogenase [KO:K00130] [EC:1.2.1.8]
CLAFUR5_13648  Dimethylglycine oxidase [KO:K00309] [EC:1.5.3.10]
CLAFUR5_09487  L-saccharopine oxidase [KO:K00306] [EC:1.5.3.1 1.5.3.7]
CLAFUR5_10500  Amino acid oxidase ImqH [KO:K00306] [EC:1.5.3.1 1.5.3.7]
CLAFUR5_00015  L-saccharopine oxidase [KO:K00306] [EC:1.5.3.1 1.5.3.7]
CLAFUR5_09275  L-saccharopine oxidase [KO:K00306] [EC:1.5.3.1 1.5.3.7]
CLAFUR5_07789  Cystathionine beta-synthase [KO:K01697] [EC:4.2.1.22]
CLAFUR5_02181  Cystathionine gamma-lyase [KO:K01758] [EC:4.4.1.1]
CLAFUR5_04058  putative serine racemase [KO:K01754] [EC:4.3.1.19]
CLAFUR5_01797  Threonine dehydratase, mitochondrial [KO:K01754] [EC:4.3.1.19]
CLAFUR5_05115  Catabolic L-serine/threonine dehydratase [KO:K17989] [EC:4.3.1.17 4.3.1.19]
CLAFUR5_13281  L-serine dehydratase [KO:K17989] [EC:4.3.1.17 4.3.1.19]
CLAFUR5_01865  Tryptophan synthase [KO:K01694] [EC:4.2.1.20]
Compound
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00037  Glycine
C00048  Glyoxylate
C00049  L-Aspartate
C00065  L-Serine
C00078  L-Tryptophan
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00109  2-Oxobutanoate
C00114  Choline
C00143  5,10-Methylenetetrahydrofolate
C00168  Hydroxypyruvate
C00188  L-Threonine
C00197  3-Phospho-D-glycerate
C00213  Sarcosine
C00258  D-Glycerate
C00263  L-Homoserine
C00300  Creatine
C00430  5-Aminolevulinate
C00441  L-Aspartate 4-semialdehyde
C00546  Methylglyoxal
C00576  Betaine aldehyde
C00581  Guanidinoacetate
C00631  2-Phospho-D-glycerate
C00719  Betaine
C00740  D-Serine
C00986  1,3-Diaminopropane
C01005  O-Phospho-L-serine
C01026  N,N-Dimethylglycine
C01102  O-Phospho-L-homoserine
C01242  [Protein]-S8-aminomethyldihydrolipoyllysine
C01888  Aminoacetone
C02051  Lipoylprotein
C02291  L-Cystathionine
C02737  Phosphatidylserine
C02972  Dihydrolipoylprotein
C03082  4-Phospho-L-aspartate
C03194  (R)-1-Aminopropan-2-ol
C03232  3-Phosphonooxypyruvate
C03283  L-2,4-Diaminobutanoate
C03508  L-2-Amino-3-oxobutanoic acid
C05519  L-Allothreonine
C06231  Ectoine
C06442  N(gamma)-Acetyldiaminobutyrate
C16432  5-Hydroxyectoine
C19929  N(alpha)-Acetyl-L-2,4-diaminobutyrate
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
PMID:11823218
  Authors
Kuhlmann AU, Bremer E.
  Title
Osmotically regulated synthesis of the compatible solute ectoine in Bacillus pasteurii and related Bacillus spp.
  Journal
Appl Environ Microbiol 68:772-83 (2002)
DOI:10.1128/AEM.68.2.772-783.2002
Reference
PMID:10473374
  Authors
Canovas D, Borges N, Vargas C, Ventosa A, Nieto JJ, Santos H.
  Title
Role of Ngamma-acetyldiaminobutyrate as an enzyme stabilizer and an intermediate in the biosynthesis of hydroxyectoine.
  Journal
Appl Environ Microbiol 65:3774-9 (1999)
DOI:10.1128/AEM.65.9.3774-3779.1999
Reference
PMID:17636255
  Authors
Bursy J, Pierik AJ, Pica N, Bremer E.
  Title
Osmotically induced synthesis of the compatible solute hydroxyectoine is mediated by an evolutionarily conserved ectoine hydroxylase.
  Journal
J Biol Chem 282:31147-55 (2007)
DOI:10.1074/jbc.M704023200
Reference
PMID:16707670
  Authors
Garcia-Estepa R, Argandona M, Reina-Bueno M, Capote N, Iglesias-Guerra F, Nieto JJ, Vargas C.
  Title
The ectD gene, which is involved in the synthesis of the compatible solute hydroxyectoine, is essential for thermoprotection of the halophilic bacterium Chromohalobacter salexigens.
  Journal
J Bacteriol 188:3774-84 (2006)
DOI:10.1128/JB.00136-06
Reference
PMID:15470257
  Authors
Arevalo-Rodriguez M, Pan X, Boeke JD, Heitman J
  Title
FKBP12 controls aspartate pathway flux in Saccharomyces cerevisiae to prevent toxic intermediate accumulation.
  Journal
Eukaryot Cell 3:1287-96 (2004)
DOI:10.1128/EC.3.5.1287-1296.2004
Reference
PMID:7639721
  Authors
Rees WD, Hay SM
  Title
The biosynthesis of threonine by mammalian cells: expression of a complete bacterial biosynthetic pathway in an animal cell.
  Journal
Biochem J 309 ( Pt 3):999-1007 (1995)
DOI:10.1042/bj3090999
Reference
PMID:11341914
  Authors
Jacques SL, Nieman C, Bareich D, Broadhead G, Kinach R, Honek JF, Wright GD
  Title
Characterization of yeast homoserine dehydrogenase, an antifungal target: the invariant histidine 309 is important for enzyme integrity.
  Journal
Biochim Biophys Acta 1544:28-41 (2001)
DOI:10.1016/S0167-4838(00)00203-X
Reference
PMID:15520012
  Authors
Chen X, Jhee KH, Kruger WD
  Title
Production of the neuromodulator H2S by cystathionine beta-synthase via the condensation of cysteine and homocysteine.
  Journal
J Biol Chem 279:52082-6 (2004)
DOI:10.1074/jbc.C400481200
Related
pathway
ffu00010  Glycolysis / Gluconeogenesis
ffu00020  Citrate cycle (TCA cycle)
ffu00230  Purine metabolism
ffu00250  Alanine, aspartate and glutamate metabolism
ffu00270  Cysteine and methionine metabolism
ffu00290  Valine, leucine and isoleucine biosynthesis
ffu00300  Lysine biosynthesis
ffu00330  Arginine and proline metabolism
ffu00460  Cyanoamino acid metabolism
ffu00470  D-Amino acid metabolism
ffu00564  Glycerophospholipid metabolism
ffu00600  Sphingolipid metabolism
ffu00620  Pyruvate metabolism
ffu00630  Glyoxylate and dicarboxylate metabolism
ffu00640  Propanoate metabolism
ffu00680  Methane metabolism
ffu00860  Porphyrin metabolism
ffu00920  Sulfur metabolism
KO pathway
ko00260   
LinkDB

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