KEGG   PATHWAY: gga03440
Entry
gga03440                    Pathway                                
Name
Homologous recombination - Gallus gallus (chicken)
Description
Homologous recombination (HR) is essential for the accurate repair of DNA double-strand breaks (DSBs), potentially lethal lesions. HR takes place in the late S-G2 phase of the cell cycle and involves the generation of a single-stranded region of DNA, followed by strand invasion, formation of a Holliday junction, DNA synthesis using the intact strand as a template, branch migration and resolution. It is investigated that RecA/Rad51 family proteins play a central role. The breast cancer susceptibility protein Brca2 and the RecQ helicase BLM (Bloom syndrome mutated) are tumor suppressors that maintain genome integrity, at least in part, through HR.
Class
Genetic Information Processing; Replication and repair
Pathway map
gga03440  Homologous recombination
gga03440

Other DBs
GO: 0000724
Organism
Gallus gallus (chicken) [GN:gga]
Gene
418122  SSBP1; single-stranded DNA-binding protein, mitochondrial [KO:K03111]
416329  RAD50; DNA repair protein RAD50 isoform X1 [KO:K10866] [EC:3.6.-.-]
395555  MRE11; double-strand break repair protein MRE11 [KO:K10865]
374246  NBN; nibrin [KO:K10867]
395401  ATM; serine-protein kinase ATM [KO:K04728] [EC:2.7.11.1]
373983  BRCA1; breast cancer type 1 susceptibility protein [KO:K10605] [EC:2.3.2.27]
424010  BARD1; BRCA1-associated RING domain protein 1 [KO:K10683]
421071  RBBP8; DNA endonuclease RBBP8 isoform X1 [KO:K20773] [EC:3.1.-.-]
417642  BRIP1; Fanconi anemia group J protein homolog [KO:K15362] [EC:5.6.2.3]
420694  TOPBP1; DNA topoisomerase 2-binding protein 1 [KO:K10728]
422608  FAM175A; BRCA1-A complex subunit Abraxas [KO:K20774]
416145  UIMC1; BRCA1-A complex subunit RAP80 [KO:K20775]
776677  BABAM1; BRISC and BRCA1-A complex member 1 isoform X1 [KO:K20776]
421417  BABAM2; BRISC and BRCA1-A complex member 2 [KO:K12173]
422201  BRCC3; lys-63-specific deubiquitinase BRCC36 [KO:K11864] [EC:3.4.19.-]
416572  PALB2; partner and localizer of BRCA2 isoform X1 [KO:K10897]
374139  BRCA2; breast cancer type 2 susceptibility protein [KO:K08775]
772237  SEM1; 26S proteasome complex subunit SEM1 [KO:K10881]
418097  SYCP3; synaptonemal complex protein 3 isoform X1 [KO:K19528]
417563  RPA1; replication protein A 70 kDa DNA-binding subunit [KO:K07466]
419566  RPA4; replication protein A 32 kDa subunit [KO:K10739]
420578  RPA3; replication protein A 14 kDa subunit [KO:K10740]
396086  RAD51; DNA repair protein RAD51 homolog 1 [KO:K04482]
418152  RAD52; DNA repair protein RAD52 homolog isoform 2 [KO:K10873]
769071  RAD51B; DNA repair protein RAD51 homolog 2 [KO:K10869]
417626  RAD51C; DNA repair protein RAD51 homolog 3 isoform X2 [KO:K10870]
417528  RAD51D; DNA repair protein RAD51 homolog 4 [KO:K10871]
420438  XRCC2; DNA repair protein XRCC2 [KO:K10879]
423485  XRCC3; DNA repair protein XRCC3 [KO:K10880]
424611  RAD54L; DNA repair and recombination protein RAD54-like [KO:K10875] [EC:5.6.2.-]
395449  RAD54B; DNA repair and recombination protein RAD54B [KO:K10877] [EC:5.6.2.-]
107057377  DNA polymerase delta subunit 2 isoform X2 [KO:K02328]
419053  POLD3; DNA polymerase delta subunit 3 [KO:K03504]
415577  BLM; Bloom syndrome protein homolog [KO:K10901] [EC:5.6.2.4]
416517  TOP3A; DNA topoisomerase 3-alpha isoform 1 [KO:K03165] [EC:5.6.2.1]
416771  TOP3B; DNA topoisomerase 3-beta-1 [KO:K03165] [EC:5.6.2.1]
101748102  MUS81; crossover junction endonuclease MUS81 [KO:K08991] [EC:3.1.22.-]
422104  EME1; crossover junction endonuclease EME1 isoform X3 [KO:K10882] [EC:3.1.22.-]
Reference
  Authors
Maloisel L, Fabre F, Gangloff S.
  Title
DNA polymerase delta is preferentially recruited during homologous recombination to promote heteroduplex DNA extension.
  Journal
Mol Cell Biol 28:1373-82 (2008)
DOI:10.1128/MCB.01651-07
Reference
  Authors
Haruta-Takahashi N, Iwasaki H.
  Title
[Recombination mediators]
  Journal
Seikagaku 79:449-53 (2007)
Reference
  Authors
Ouyang KJ, Woo LL, Ellis NA.
  Title
Homologous recombination and maintenance of genome integrity: Cancer and aging through the prism of human RecQ helicases.
  Journal
Mech Ageing Dev 129:425-40 (2008)
DOI:10.1016/j.mad.2008.03.003
Reference
  Authors
Kawabata M, Kawabata T, Nishibori M.
  Title
Role of recA/RAD51 family proteins in mammals.
  Journal
Acta Med Okayama 59:1-9 (2005)
DOI:10.18926/AMO/31987
Reference
  Authors
Prado F, Cortes-Ledesma F, Huertas P, Aguilera A.
  Title
Mitotic recombination in Saccharomyces cerevisiae.
  Journal
Curr Genet 42:185-98 (2003)
DOI:10.1007/s00294-002-0346-3
Reference
  Authors
Heyer WD, Li X, Rolfsmeier M, Zhang XP.
  Title
Rad54: the Swiss Army knife of homologous recombination?
  Journal
Nucleic Acids Res 34:4115-25 (2006)
DOI:10.1093/nar/gkl481
Reference
  Authors
Michel B, Boubakri H, Baharoglu Z, LeMasson M, Lestini R.
  Title
Recombination proteins and rescue of arrested replication forks.
  Journal
DNA Repair (Amst) 6:967-80 (2007)
DOI:10.1016/j.dnarep.2007.02.016
KO pathway
ko03440   
LinkDB

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