KEGG   PATHWAY: hbo00630
Entry
hbo00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Halogeometricum borinquense
Class
Metabolism; Carbohydrate metabolism
Pathway map
hbo00630  Glyoxylate and dicarboxylate metabolism
hbo00630

Module
hbo_M00012  Glyoxylate cycle [PATH:hbo00630]
hbo_M00621  Glycine cleavage system [PATH:hbo00630]
hbo_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:hbo00630]
hbo_M00968  Pentose bisphosphate pathway (nucleoside degradation), archaea, nucleoside/NMP => 3-PGA/glycerone phosphate [PATH:hbo00630]
Other DBs
GO: 0046487 0043648
Organism
Halogeometricum borinquense [GN:hbo]
Gene
Hbor_05790  PEP phosphonomutase-like enzyme [KO:K01637] [EC:4.1.3.1 4.1.3.30]
Hbor_32150  acyl-CoA synthetase/AMP-acid ligase [KO:K01895] [EC:6.2.1.1]
Hbor_39570  acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
Hbor_16380  acyl-CoA synthetase/AMP-acid ligase [KO:K01895] [EC:6.2.1.1]
Hbor_19950  acyl-CoA synthetase/AMP-acid ligase [KO:K01895] [EC:6.2.1.1]
Hbor_23260  acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
Hbor_39550  acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
Hbor_02300  malate dehydrogenase (NAD) [KO:K00024] [EC:1.1.1.37]
Hbor_34280  citrate synthase [KO:K01647] [EC:2.3.3.1]
Hbor_27300  citrate synthase [KO:K01659] [EC:2.3.3.5]
Hbor_32160  aconitase [KO:K27802] [EC:4.2.1.3 4.2.1.99]
Hbor_22070  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Hbor_33580  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Hbor_23830  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Hbor_30010  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Hbor_29980  acyl dehydratase [KO:K17865] [EC:4.2.1.55]
Hbor_14770  acyl dehydratase [KO:K17865] [EC:4.2.1.55]
Hbor_18610  methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
Hbor_11200  acetyl/propionyl-CoA carboxylase, alpha subunit [KO:K11263] [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
Hbor_30030  propionyl-CoA carboxylase carboxyltransferase subunit [KO:K19312] [EC:6.4.1.2 6.4.1.3 2.1.3.15]
Hbor_11050  propionyl-CoA carboxylase carboxyltransferase subunit [KO:K19312] [EC:6.4.1.2 6.4.1.3 2.1.3.15]
Hbor_11060  hypothetical protein [KO:K22568] [EC:6.4.1.2 6.4.1.3]
Hbor_30040  hypothetical protein [KO:K22568] [EC:6.4.1.2 6.4.1.3]
Hbor_23870  methylmalonyl-CoA mutase family protein [KO:K01849] [EC:5.4.99.2]
Hbor_18560  methylmalonyl-CoA mutase [KO:K01848] [EC:5.4.99.2]
Hbor_23270  methylmalonyl-CoA mutase [KO:K01848] [EC:5.4.99.2]
Hbor_30530  citrate lyase beta subunit [KO:K19282] [EC:4.1.3.24 3.1.2.30]
Hbor_07220  predicted phosphatase [KO:K01091] [EC:3.1.3.18]
Hbor_11780  predicted phosphatase [KO:K01091] [EC:3.1.3.18]
Hbor_04530  haloacid dehalogenase superfamily enzyme, subfamily IA [KO:K01091] [EC:3.1.3.18]
Hbor_16930  phosphoglycolate phosphatase [KO:K22223] [EC:3.1.3.18]
Hbor_21570  ribulose 1,5-bisphosphate carboxylase large subunit [KO:K01601] [EC:4.1.1.39]
Hbor_23510  glutamate synthase family protein [KO:K00284] [EC:1.4.7.1]
Hbor_29510  L-glutamine synthetase [KO:K01915] [EC:6.3.1.2]
Hbor_13750  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
Hbor_39860  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
Hbor_39840  glycine dehydrogenase (decarboxylating) alpha subunit [KO:K00282] [EC:1.4.4.2]
Hbor_08360  glycine dehydrogenase (decarboxylating) alpha subunit [KO:K00282] [EC:1.4.4.2]
Hbor_39850  glycine dehydrogenase (decarboxylating) beta subunit [KO:K00283] [EC:1.4.4.2]
Hbor_08350  glycine dehydrogenase (decarboxylating) beta subunit [KO:K00283] [EC:1.4.4.2]
Hbor_39820  aminomethyltransferase [KO:K00605] [EC:2.1.2.10]
Hbor_08380  aminomethyltransferase [KO:K00605] [EC:2.1.2.10]
Hbor_27940  aminomethyltransferase [KO:K00605] [EC:2.1.2.10]
Hbor_02940  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
Hbor_39890  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
Hbor_39830  glycine cleavage system H protein [KO:K02437]
Hbor_08370  glycine cleavage system H protein [KO:K02437]
Hbor_16760  glycerate 2-kinase [KO:K11529] [EC:2.7.1.165]
Hbor_21830  2-keto-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
Hbor_32670  formate dehydrogenase, alpha subunit, archaeal-type [KO:K00123] [EC:1.17.1.9]
Hbor_06300  formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
hbo00010  Glycolysis / Gluconeogenesis
hbo00020  Citrate cycle (TCA cycle)
hbo00030  Pentose phosphate pathway
hbo00053  Ascorbate and aldarate metabolism
hbo00071  Fatty acid degradation
hbo00230  Purine metabolism
hbo00250  Alanine, aspartate and glutamate metabolism
hbo00260  Glycine, serine and threonine metabolism
hbo00620  Pyruvate metabolism
hbo00710  Carbon fixation by Calvin cycle
hbo00750  Vitamin B6 metabolism
hbo00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

DBGET integrated database retrieval system