KEGG   PATHWAY: kaf00270
Entry
kaf00270                    Pathway                                
Name
Cysteine and methionine metabolism - Kazachstania africana
Description
Cysteine and methionine are sulfur-containing amino acids. Cysteine is synthesized from serine through different pathways in different organism groups. In bacteria and plants, cysteine is converted from serine (via acetylserine) by transfer of hydrogen sulfide [MD:M00021]. In animals, methionine-derived homocysteine is used as sulfur source and its condensation product with serine (cystathionine) is converted to cysteine [MD:M00338]. Cysteine is metabolized to pyruvate in multiple routes. Methionine is an essential amino acid, which animals cannot synthesize. In bacteria and plants, methionine is synthesized from aspartate [MD:M00017]. S-Adenosylmethionine (SAM), synthesized from methionine and ATP, is a methyl group donor in many important transfer reactions including DNA methylation for regulation of gene expression. SAM may also be used to regenerate methionine in the methionine salvage pathway [MD:M00034].
Class
Metabolism; Amino acid metabolism
Pathway map
kaf00270  Cysteine and methionine metabolism
kaf00270

Module
kaf_M00034  Methionine salvage pathway [PATH:kaf00270]
kaf_M00338  Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:kaf00270]
Other DBs
GO: 0006534 0006555
Organism
Kazachstania africana [GN:kaf]
Gene
KAFR_0F03450  KAFR0F03450; hypothetical protein [KO:K01738] [EC:2.5.1.47]
KAFR_0F03070  KAFR0F03070; hypothetical protein [KO:K17069] [EC:2.5.1.49 2.5.1.47]
KAFR_0K00760  KAFR0K00760; hypothetical protein [KO:K01758] [EC:4.4.1.1]
KAFR_0I01230  KAFR0I01230; hypothetical protein [KO:K01697] [EC:4.2.1.22]
KAFR_0L00150  KAFR0L00150; hypothetical protein [KO:K00547] [EC:2.1.1.10]
KAFR_0F04420  KAFR0F04420; hypothetical protein [KO:K00547] [EC:2.1.1.10]
KAFR_0B00210  KAFR0B00210; hypothetical protein [KO:K00547] [EC:2.1.1.10]
KAFR_0K01750  KAFR0K01750; hypothetical protein [KO:K00549] [EC:2.1.1.14]
KAFR_0D00560  KAFR0D00560; hypothetical protein [KO:K00789] [EC:2.5.1.6]
KAFR_0B03630  KAFR0B03630; hypothetical protein [KO:K01611] [EC:4.1.1.50]
KAFR_0D02680  KAFR0D02680; hypothetical protein [KO:K00797] [EC:2.5.1.16]
KAFR_0H02120  KAFR0H02120; hypothetical protein [KO:K00802] [EC:2.5.1.22]
KAFR_0J01010  KAFR0J01010; hypothetical protein [KO:K00772] [EC:2.4.2.28]
KAFR_0A05430  KAFR0A05430; hypothetical protein [KO:K08963] [EC:5.3.1.23]
KAFR_0E02000  KAFR0E02000; hypothetical protein [KO:K08964] [EC:4.2.1.109]
KAFR_0E00520  KAFR0E00520; hypothetical protein [KO:K09880] [EC:3.1.3.77]
KAFR_0K00850  KAFR0K00850; hypothetical protein [KO:K08967] [EC:1.13.11.53 1.13.11.54]
KAFR_0D01420  KAFR0D01420; hypothetical protein [KO:K00838] [EC:2.6.1.57 2.6.1.39 2.6.1.27 2.6.1.5]
KAFR_0C04110  KAFR0C04110; hypothetical protein [KO:K08968] [EC:1.8.4.14]
KAFR_0J00290  KAFR0J00290; hypothetical protein [KO:K01251] [EC:3.13.2.1]
KAFR_0L00780  KAFR0L00780; hypothetical protein [KO:K00928] [EC:2.7.2.4]
KAFR_0B05830  KAFR0B05830; hypothetical protein [KO:K00133] [EC:1.2.1.11]
KAFR_0B06920  KAFR0B06920; hypothetical protein [KO:K00003] [EC:1.1.1.3]
KAFR_0D04000  KAFR0D04000; hypothetical protein [KO:K00641] [EC:2.3.1.31 2.3.1.46]
KAFR_0B06830  KAFR0B06830; hypothetical protein [KO:K01739] [EC:2.5.1.48]
KAFR_0B07030  KAFR0B07030; hypothetical protein [KO:K00826] [EC:2.6.1.42]
KAFR_0H03760  KAFR0H03760; hypothetical protein [KO:K00826] [EC:2.6.1.42]
KAFR_0E04480  KAFR0E04480; hypothetical protein [KO:K00826] [EC:2.6.1.42]
KAFR_0A03480  KAFR0A03480; hypothetical protein [KO:K11204] [EC:6.3.2.2]
KAFR_0D01200  KAFR0D01200; hypothetical protein [KO:K21456] [EC:6.3.2.3]
KAFR_0D02850  KAFR0D02850; hypothetical protein [KO:K14454] [EC:2.6.1.1]
KAFR_0D03160  KAFR0D03160; hypothetical protein [KO:K14455] [EC:2.6.1.1]
KAFR_0A00760  KAFR0A00760; hypothetical protein [KO:K14455] [EC:2.6.1.1]
KAFR_0A03940  KAFR0A03940; hypothetical protein [KO:K01011] [EC:2.8.1.1 2.8.1.2]
KAFR_0C01710  KAFR0C01710; hypothetical protein [KO:K00026] [EC:1.1.1.37]
KAFR_0C03960  KAFR0C03960; hypothetical protein [KO:K00026] [EC:1.1.1.37]
KAFR_0F02690  KAFR0F02690; hypothetical protein [KO:K00026] [EC:1.1.1.37]
KAFR_0I00130  KAFR0I00130; hypothetical protein [KO:K17989] [EC:4.3.1.17 4.3.1.19]
KAFR_0F04430  KAFR0F04430; hypothetical protein [KO:K17989] [EC:4.3.1.17 4.3.1.19]
KAFR_0D00110  KAFR0D00110; hypothetical protein [KO:K17989] [EC:4.3.1.17 4.3.1.19]
KAFR_0B01270  KAFR0B01270; hypothetical protein [KO:K00058] [EC:1.1.1.95 1.1.1.399]
KAFR_0L01110  KAFR0L01110; hypothetical protein [KO:K00058] [EC:1.1.1.95 1.1.1.399]
KAFR_0G02400  KAFR0G02400; hypothetical protein [KO:K00831] [EC:2.6.1.52]
Compound
C00019  S-Adenosyl-L-methionine
C00021  S-Adenosyl-L-homocysteine
C00022  Pyruvate
C00041  L-Alanine
C00049  L-Aspartate
C00051  Glutathione
C00059  Sulfate
C00065  L-Serine
C00073  L-Methionine
C00094  Sulfite
C00097  L-Cysteine
C00109  2-Oxobutanoate
C00155  L-Homocysteine
C00170  5'-Methylthioadenosine
C00197  3-Phospho-D-glycerate
C00263  L-Homoserine
C00283  Hydrogen sulfide
C00409  Methanethiol
C00441  L-Aspartate 4-semialdehyde
C00491  L-Cystine
C00506  L-Cysteate
C00606  3-Sulfino-L-alanine
C00793  D-Cysteine
C00957  Mercaptopyruvate
C00979  O-Acetyl-L-serine
C01005  O-Phospho-L-serine
C01077  O-Acetyl-L-homoserine
C01118  O-Succinyl-L-homoserine
C01137  S-Adenosylmethioninamine
C01180  4-Methylthio-2-oxobutanoic acid
C01234  1-Aminocyclopropane-1-carboxylate
C01817  L-Homocystine
C01962  Thiocysteine
C02218  Dehydroalanine
C02291  L-Cystathionine
C02356  (S)-2-Aminobutanoate
C02989  L-Methionine S-oxide
C03082  4-Phospho-L-aspartate
C03089  5-Methylthio-D-ribose
C03145  N-Formylmethionine
C03232  3-Phosphonooxypyruvate
C03431  S-Inosyl-L-homocysteine
C03539  S-Ribosyl-L-homocysteine
C04188  S-Methyl-5-thio-D-ribose 1-phosphate
C04582  S-Methyl-5-thio-D-ribulose 1-phosphate
C05324  Nicotianamine
C05524  Aminoacyl-L-methionine
C05526  S-Glutathionyl-L-cysteine
C05527  3-Sulfinylpyruvate
C05528  3-Sulfopyruvate
C05823  3-Mercaptolactate
C05824  S-Sulfo-L-cysteine
C06547  Ethylene
C08276  3-(Methylthio)propanoate
C09306  Sulfur dioxide
C11437  1-Deoxy-D-xylulose 5-phosphate
C11481  HSO3-
C11499  (S)-3-Sulfolactate
C11537  (2R)-3-Sulfolactate
C15606  1,2-Dihydroxy-5-(methylthio)pent-1-en-3-one
C15650  2,3-Diketo-5-methylthiopentyl-1-phosphate
C15651  2-Hydroxy-3-keto-5-methylthiopentenyl-1-phosphate
C18049  N-Acyl-L-homoserine lactone
C19787  5'-S-Methyl-5'-thioinosine
C21015  gamma-L-Glutamyl-L-2-aminobutyrate
C21016  Ophthalmate
C22359  S-Methyl-1-thio-D-xylulose 5-phosphate
Reference
  Authors
Sekowska A, Denervaud V, Ashida H, Michoud K, Haas D, Yokota A, Danchin A
  Title
Bacterial variations on the methionine salvage pathway.
  Journal
BMC Microbiol 4:9 (2004)
DOI:10.1186/1471-2180-4-9
Reference
  Authors
Ashida H, Saito Y, Kojima C, Kobayashi K, Ogasawara N, Yokota A.
  Title
A functional link between RuBisCO-like protein of Bacillus and photosynthetic RuBisCO.
  Journal
Science 302:286-90 (2003)
DOI:10.1126/science.1086997
Reference
  Authors
Sekowska A, Danchin A.
  Title
The methionine salvage pathway in Bacillus subtilis.
  Journal
BMC Microbiol 2:8 (2002)
DOI:10.1186/1471-2180-2-8
Reference
  Authors
Berger BJ, English S, Chan G, Knodel MH.
  Title
Methionine regeneration and aminotransferases in Bacillus subtilis, Bacillus cereus, and Bacillus anthracis.
  Journal
J Bacteriol 185:2418-31 (2003)
DOI:10.1128/JB.185.8.2418-2431.2003
Reference
  Authors
Goyer A, Collakova E, Shachar-Hill Y, Hanson AD
  Title
Functional characterization of a methionine gamma-lyase in Arabidopsis and its implication in an alternative to the reverse trans-sulfuration pathway.
  Journal
Plant Cell Physiol 48:232-42 (2007)
DOI:10.1093/pcp/pcl055
Reference
  Authors
Rebeille F, Jabrin S, Bligny R, Loizeau K, Gambonnet B, Van Wilder V, Douce R, Ravanel S
  Title
Methionine catabolism in Arabidopsis cells is initiated by a gamma-cleavage process and leads to S-methylcysteine and isoleucine syntheses.
  Journal
Proc Natl Acad Sci U S A 103:15687-92 (2006)
DOI:10.1073/pnas.0606195103
Reference
  Authors
Pirkov I, Norbeck J, Gustafsson L, Albers E
  Title
A complete inventory of all enzymes in the eukaryotic methionine salvage pathway.
  Journal
FEBS J 275:4111-20 (2008)
DOI:10.1111/j.1742-4658.2008.06552.x
Reference
  Authors
Ashida H, Saito Y, Kojima C, Yokota A
  Title
Enzymatic characterization of 5-methylthioribulose-1-phosphate dehydratase of the methionine salvage pathway in Bacillus subtilis.
  Journal
Biosci Biotechnol Biochem 72:959-67 (2008)
DOI:10.1271/bbb.70651
Reference
  Authors
Kitabatake M, So MW, Tumbula DL, Soll D
  Title
Cysteine biosynthesis pathway in the archaeon Methanosarcina barkeri encoded by acquired bacterial genes?
  Journal
J Bacteriol 182:143-5 (2000)
DOI:10.1128/JB.182.1.143-145.2000
Reference
  Authors
Mino K, Ishikawa K
  Title
Characterization of a novel thermostable O-acetylserine sulfhydrylase from Aeropyrum pernix K1.
  Journal
J Bacteriol 185:2277-84 (2003)
DOI:10.1128/JB.185.7.2277-2284.2003
Reference
  Authors
Tanabe S
  Title
Development of assay methods for endogenous inorganic sulfur compounds and sulfurtransferases and evaluation of the physiological functions of bound sulfur.
  Journal
Yakugaku Zasshi 128:881-900 (2008)
DOI:10.1248/yakushi.128.881
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Gutierrez JA, Crowder T, Rinaldo-Matthis A, Ho MC, Almo SC, Schramm VL
  Title
Transition state analogs of 5'-methylthioadenosine nucleosidase disrupt quorum sensing.
  Journal
Nat Chem Biol 5:251-7 (2009)
DOI:10.1038/nchembio.153
Related
pathway
kaf00010  Glycolysis / Gluconeogenesis
kaf00250  Alanine, aspartate and glutamate metabolism
kaf00260  Glycine, serine and threonine metabolism
kaf00290  Valine, leucine and isoleucine biosynthesis
kaf00430  Taurine and hypotaurine metabolism
kaf00480  Glutathione metabolism
kaf00620  Pyruvate metabolism
kaf00640  Propanoate metabolism
kaf00770  Pantothenate and CoA biosynthesis
kaf00900  Terpenoid backbone biosynthesis
kaf00920  Sulfur metabolism
KO pathway
ko00270   
LinkDB

DBGET integrated database retrieval system