KEGG   PATHWAY: lco00010
Entry
lco00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Larimichthys crocea (large yellow croaker)
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
lco00010  Glycolysis / Gluconeogenesis
lco00010

Module
lco_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:lco00010]
lco_M00002  Glycolysis, core module involving three-carbon compounds [PATH:lco00010]
lco_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:lco00010]
lco_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:lco00010]
Other DBs
GO: 0006096 0006094
Organism
Larimichthys crocea (large yellow croaker) [GN:lco]
Gene
104924976  hexokinase-2 [KO:K00844] [EC:2.7.1.1]
104932780  hexokinase-1 [KO:K00844] [EC:2.7.1.1]
109139468  hk3; LOW QUALITY PROTEIN: hexokinase-3 [KO:K00844] [EC:2.7.1.1]
104920178  hexokinase-1 [KO:K00844] [EC:2.7.1.1]
104920179  putative hexokinase HKDC1 isoform X1 [KO:K00844] [EC:2.7.1.1]
104922970  gck; glucokinase isoform X1 [KO:K12407] [EC:2.7.1.2]
104939778  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
104920758  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
104932642  ATP-dependent 6-phosphofructokinase, platelet type isoform X1 [KO:K00850] [EC:2.7.1.11]
104933053  ATP-dependent 6-phosphofructokinase, muscle type [KO:K00850] [EC:2.7.1.11]
104924699  ATP-dependent 6-phosphofructokinase, platelet type isoform X1 [KO:K00850] [EC:2.7.1.11]
104928857  pfkl; ATP-dependent 6-phosphofructokinase, liver type [KO:K00850] [EC:2.7.1.11]
104931351  ATP-dependent 6-phosphofructokinase, muscle type-like isoform X1 [KO:K00850] [EC:2.7.1.11]
104926515  fructose-1,6-bisphosphatase 1 [KO:K03841] [EC:3.1.3.11]
104932680  fructose-1,6-bisphosphatase 1 [KO:K03841] [EC:3.1.3.11]
104932681  fructose-1,6-bisphosphatase isozyme 2 [KO:K03841] [EC:3.1.3.11]
104923555  aldoc; fructose-bisphosphate aldolase C isoform X2 [KO:K01623] [EC:4.1.2.13]
104930115  fructose-bisphosphate aldolase A [KO:K01623] [EC:4.1.2.13]
104939510  fructose-bisphosphate aldolase B [KO:K01623] [EC:4.1.2.13]
104932890  fructose-bisphosphate aldolase C-B [KO:K01623] [EC:4.1.2.13]
104932538  tpi1; triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
104935008  triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
104929005  gapdh; glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
104936375  glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
104928098  glyceraldehyde-3-phosphate dehydrogenase 2 [KO:K10705] [EC:1.2.1.12]
104918952  pgk1; phosphoglycerate kinase 1 [KO:K00927] [EC:2.7.2.3]
104930037  phosphoglycerate mutase 1 [KO:K01834] [EC:5.4.2.11]
104920092  phosphoglycerate mutase 2 [KO:K01834] [EC:5.4.2.11]
104927840  phosphoglycerate mutase 1 [KO:K01834] [EC:5.4.2.11]
104931338  enolase [KO:K01689] [EC:4.2.1.11]
104935007  gamma-enolase isoform X4 [KO:K01689] [EC:4.2.1.11]
104926964  eno1; alpha-enolase isoform X1 [KO:K01689] [EC:4.2.1.11]
104937621  eno3; beta-enolase [KO:K01689] [EC:4.2.1.11]
104932541  eno2; gamma-enolase [KO:K01689] [EC:4.2.1.11]
104939711  eno4; enolase 4 isoform X1 [KO:K27394] [EC:4.2.1.11]
104925043  pyruvate kinase PKM isoform X1 [KO:K00873] [EC:2.7.1.40]
109140894  pyruvate kinase PKM [KO:K00873] [EC:2.7.1.40]
104934078  pyruvate dehydrogenase E1 component subunit alpha, mitochondrial isoform X1 [KO:K00161] [EC:1.2.4.1]
104924583  pyruvate dehydrogenase E1 component subunit alpha, mitochondrial [KO:K00161] [EC:1.2.4.1]
104930704  pdhb; pyruvate dehydrogenase E1 component subunit beta, mitochondrial [KO:K00162] [EC:1.2.4.1]
104929921  dlat; dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial [KO:K00627] [EC:2.3.1.12]
104930615  dld; dihydrolipoyl dehydrogenase, mitochondrial [KO:K00382] [EC:1.8.1.4]
104940653  L-lactate dehydrogenase C chain isoform X2 [KO:K00016] [EC:1.1.1.27]
104927636  L-lactate dehydrogenase B chain isoform X3 [KO:K00016] [EC:1.1.1.27]
104920463  L-lactate dehydrogenase A chain [KO:K00016] [EC:1.1.1.27]
104917909  alcohol dehydrogenase class-3 isoform X1 [KO:K00121] [EC:1.1.1.284 1.1.1.1]
104917907  alcohol dehydrogenase class-3 [KO:K00121] [EC:1.1.1.284 1.1.1.1]
109142206  alcohol dehydrogenase 1 [KO:K00121] [EC:1.1.1.284 1.1.1.1]
104929593  alcohol dehydrogenase class-3 chain L [KO:K00121] [EC:1.1.1.284 1.1.1.1]
104929592  alcohol dehydrogenase 1-like [KO:K00121] [EC:1.1.1.284 1.1.1.1]
104937447  akr1a1; alcohol dehydrogenase [NADP(+)] isoform X2 [KO:K00002] [EC:1.1.1.2]
104921221  alcohol dehydrogenase [NADP(+)] A isoform X1 [KO:K00002] [EC:1.1.1.2]
104930670  fatty aldehyde dehydrogenase isoform X2 [KO:K00128] [EC:1.2.1.3]
104934420  fatty aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
104939874  aldh2; aldehyde dehydrogenase, mitochondrial [KO:K00128] [EC:1.2.1.3]
104931114  aldh16a1; aldehyde dehydrogenase family 16 member A1 [KO:K00128] [EC:1.2.1.3]
104930668  aldehyde dehydrogenase, dimeric NADP-preferring isoform X1 [KO:K00128] [EC:1.2.1.3]
104931924  aldh7a1; alpha-aminoadipic semialdehyde dehydrogenase [KO:K14085] [EC:1.2.1.31 1.2.1.8 1.2.1.3]
104935074  aldehyde dehydrogenase family 9 member A1-B isoform X1 [KO:K00149] [EC:1.2.1.47 1.2.1.3]
104921743  aldehyde dehydrogenase family 9 member A1 [KO:K00149] [EC:1.2.1.47 1.2.1.3]
104935243  aldh3b1; aldehyde dehydrogenase family 3 member B1 [KO:K00129] [EC:1.2.1.5]
104921301  aldehyde dehydrogenase family 3 member B1-like [KO:K00129] [EC:1.2.1.5]
104934703  acss1; acetyl-coenzyme A synthetase 2-like, mitochondrial [KO:K01895] [EC:6.2.1.1]
104933685  acetyl-coenzyme A synthetase, cytoplasmic [KO:K01895] [EC:6.2.1.1]
104930543  acetyl-coenzyme A synthetase 2-like, mitochondrial isoform X1 [KO:K01895] [EC:6.2.1.1]
104938526  acetyl-coenzyme A synthetase, cytoplasmic isoform X1 [KO:K01895] [EC:6.2.1.1]
104936403  galm; aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
104927428  phosphoglucomutase-1-like [KO:K01835] [EC:5.4.2.2]
104919023  pgm1; phosphoglucomutase-1 [KO:K01835] [EC:5.4.2.2]
104927674  pgm2; phosphoglucomutase-2 [KO:K15779] [EC:5.4.2.2 5.4.2.7]
104933954  g6pc3; glucose-6-phosphatase 3 [KO:K01084] [EC:3.1.3.9]
104939244  g6pc; glucose-6-phosphatase [KO:K01084] [EC:3.1.3.9]
104939243  glucose-6-phosphatase [KO:K01084] [EC:3.1.3.9]
104927191  glucose-6-phosphatase-like [KO:K01084] [EC:3.1.3.9]
104920148  ADP-dependent glucokinase [KO:K08074] [EC:2.7.1.147]
104929546  adpgk; ADP-dependent glucokinase isoform X1 [KO:K08074] [EC:2.7.1.147]
104940663  bpgm; bisphosphoglycerate mutase [KO:K01837] [EC:5.4.2.4 5.4.2.11]
104936552  multiple inositol polyphosphate phosphatase 1 isoform X2 [KO:K03103] [EC:3.1.3.62 3.1.3.80]
104927472  multiple inositol polyphosphate phosphatase 1 [KO:K03103] [EC:3.1.3.62 3.1.3.80]
104929794  multiple inositol polyphosphate phosphatase 1 [KO:K03103] [EC:3.1.3.62 3.1.3.80]
104933695  pck1; phosphoenolpyruvate carboxykinase, cytosolic [GTP] [KO:K01596] [EC:4.1.1.32]
104927516  pck2; phosphoenolpyruvate carboxykinase [GTP], mitochondrial [KO:K01596] [EC:4.1.1.32]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
lco00020  Citrate cycle (TCA cycle)
lco00030  Pentose phosphate pathway
lco00500  Starch and sucrose metabolism
lco00620  Pyruvate metabolism
lco00640  Propanoate metabolism
KO pathway
ko00010   
LinkDB

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