KEGG   PATHWAY: lin00230
Entry
lin00230                    Pathway                                
Name
Purine metabolism - Listeria innocua (serotype 6a)
Class
Metabolism; Nucleotide metabolism
Pathway map
lin00230  Purine metabolism
lin00230

Module
lin_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:lin00230]
lin_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:lin00230]
lin_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:lin00230]
lin_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:lin00230]
lin_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:lin00230]
Other DBs
GO: 0006163 0042278
Organism
Listeria innocua (serotype 6a) [GN:lin]
Gene
lin2079  similar to unknown proteins [KO:K01515] [EC:3.6.1.13 3.6.1.-]
drm  similar to phosphopentomutase [KO:K01839] [EC:5.4.2.7]
lin2618  similar to phosphomannomutase and phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
prs.1  phosphoribosyl pyrophosphate synthetase [KO:K00948] [EC:2.7.6.1]
prs.2  similar to phosphoribosyl pyrophosphate synthetase [KO:K00948] [EC:2.7.6.1]
purF  glutamine phosphoribosylpyrophosphate amidotransferase [KO:K00764] [EC:2.4.2.14]
purD  phosphoribosylglycinamide synthetase [KO:K01945] [EC:6.3.4.13]
purN  highly similar to phosphoribosylglycinamide formyltransferases [KO:K11175] [EC:2.1.2.2]
purQ  phosphoribosylformylglycinamidine synthetase I [KO:K23269] [EC:6.3.5.3]
lin1883  similar to unknown protein [KO:K23264] [EC:6.3.5.3]
purL  similar to phosphoribosylformylglycinamidine synthetase II [KO:K23265] [EC:6.3.5.3 3.5.1.2]
purM  phosphoribosylaminoimidazole synthetase [KO:K01933] [EC:6.3.3.1]
purK  phosphoribosylaminoimidazole carboxylase II [KO:K01589] [EC:6.3.4.18]
purE  hosphoribosylaminoimidazole carboxylase I [KO:K01588] [EC:5.4.99.18]
purC  phosphoribosylaminoimidazole succinocarboxamide synthetase [KO:K01923] [EC:6.3.2.6]
purB  adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
purH  Bifunctional phosphoribosylaminoimidazole carboxy formyl formyltransferase and inosine-monophosphate cyclohydrolase [KO:K00602] [EC:2.1.2.3 3.5.4.10]
apt  similar to adenine phosphoribosyltransferase [KO:K00759] [EC:2.4.2.7]
lin0177  similar to 5'-nucleotidase, putative peptidoglycan bound protein (LPXTG motif) [KO:K01081] [EC:3.1.3.5]
pnp  similar to purine-nucleoside phosphorylase [KO:K03783] [EC:2.4.2.1]
deoD  purine nucleoside phosphorylase [KO:K03784] [EC:2.4.2.1]
lin0251  fusion protein, N-terminal part similar to B. subtilis YacA protein, C-terminal part similar to hypoxanthine-guanine phosphoribosyltransferase [KO:K15780] [EC:6.3.4.19 2.4.2.8]
lin0179  similar to inosine monophosphate dehydrogenase [KO:K00088] [EC:1.1.1.205]
guaB  similar to inosine-monophosphate dehydrogenase [KO:K00088] [EC:1.1.1.205]
ndk  similar to nucleoside diphosphate kinase [KO:K00940] [EC:2.7.4.6]
lin1202  conserved hypothetical protein, similar to B. subtilis YsnA protein [KO:K01519] [EC:3.6.1.66]
lin1998  similar to xanthine phosphoribosyltransferase [KO:K03816] [EC:2.4.2.22]
guaA  highly similar to GMP synthetase [KO:K01951] [EC:6.3.5.2]
lin1941  similar to guanylate kinases [KO:K00942] [EC:2.7.4.8]
lin2259  similar to ribonucleoside-diphosphate reductase, subunit alpha [KO:K00525] [EC:1.17.4.1]
lin2258  similar to ribonucleoside-diphosphate reductase, subunit beta [KO:K00526] [EC:1.17.4.1]
lin0305  highly similar to anaerobic ribonucleoside-triphosphate reductase [KO:K21636] [EC:1.1.98.6]
lin2806  similar to dGTP triphosphohydrolase [KO:K01129] [EC:3.1.5.1]
relA  similar to (p)ppGpp synthetase [KO:K01139] [EC:2.7.6.5 3.1.7.2]
lin0966  similar to B. subtilis YjbM protein [KO:K07816] [EC:2.7.6.5]
lin0794  weakly similar to GTP-pyrophosphokinase [KO:K07816] [EC:2.7.6.5]
purA  highly similar to adenylosuccinate synthetase [KO:K01939] [EC:6.3.4.4]
adeC  highly similar to adenine deaminases [KO:K01486] [EC:3.5.4.2]
lin1438  conserved hypothetical protein [KO:K09769] [EC:3.1.4.16]
adk  highly similar to adenylate kinases [KO:K00939] [EC:2.7.4.3]
lin0541  similar to N-carbamyl-L-amino acid amidohydrolase [KO:K02083] [EC:3.5.3.9]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
lin00030  Pentose phosphate pathway
lin00220  Arginine biosynthesis
lin00250  Alanine, aspartate and glutamate metabolism
lin00260  Glycine, serine and threonine metabolism
lin00340  Histidine metabolism
lin00630  Glyoxylate and dicarboxylate metabolism
lin00730  Thiamine metabolism
lin00740  Riboflavin metabolism
lin00790  Folate biosynthesis
KO pathway
ko00230   
LinkDB

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