KEGG   PATHWAY: ncc00970
Entry
ncc00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Notothenia coriiceps (black rockcod)
Class
Genetic Information Processing; Translation
Pathway map
ncc00970  Aminoacyl-tRNA biosynthesis
ncc00970

Organism
Notothenia coriiceps (black rockcod) [GN:ncc]
Gene
tRNA-Ala  tRNA-Ala [KO:K14218]
tRNA-Arg  tRNA-Arg [KO:K14219]
tRNA-Asn  tRNA-Asn [KO:K14220]
tRNA-Cys  tRNA-Cys [KO:K14222]
tRNA-Glu  tRNA-Glu [KO:K14224]
tRNA-Gly  tRNA-Gly [KO:K14225]
tRNA-His  tRNA-His [KO:K14226]
tRNA-Ile  tRNA-Ile [KO:K14227]
tRNA-Leu-2  tRNA-Leu [KO:K14228]
tRNA-Lys  tRNA-Lys [KO:K14229]
tRNA-Met  tRNA-Met [KO:K14230]
tRNA-Pro  tRNA-Pro [KO:K14232]
tRNA-Trp  tRNA-Trp [KO:K14235]
tRNA-Tyr  tRNA-Tyr [KO:K14236]
104951408  ears2; probable glutamate--tRNA ligase, mitochondrial [KO:K01885] [EC:6.1.1.17]
104942762  qrsl1; glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial [KO:K02433] [EC:6.3.5.6 6.3.5.7]
104963070  gatb; glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial [KO:K02434] [EC:6.3.5.6 6.3.5.7]
104942800  gatc; glutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial isoform X1 [KO:K02435] [EC:6.3.5.6 6.3.5.7]
104953762  qars; glutamine--tRNA ligase isoform X1 [KO:K01886] [EC:6.1.1.18]
104941800  aars; LOW QUALITY PROTEIN: alanine--tRNA ligase, cytoplasmic [KO:K01872] [EC:6.1.1.7]
104967497  dars; aspartate--tRNA ligase, cytoplasmic [KO:K22503] [EC:6.1.1.12]
104941508  nars2; probable asparagine--tRNA ligase, mitochondrial [KO:K01893] [EC:6.1.1.22]
104942946  gars; glycine--tRNA ligase [KO:K01880] [EC:6.1.1.14]
104954055  probable threonine--tRNA ligase 2, cytoplasmic [KO:K01868] [EC:6.1.1.3]
104952903  sars; serine--tRNA ligase, cytoplasmic [KO:K01875] [EC:6.1.1.11]
104954038  pstk; L-seryl-tRNA(Sec) kinase [KO:K10837] [EC:2.7.1.164]
104966101  sepsecs; O-phosphoseryl-tRNA(Sec) selenium transferase [KO:K03341] [EC:2.9.1.2]
104964163  cars2; probable cysteine--tRNA ligase, mitochondrial isoform X1 [KO:K01883] [EC:6.1.1.16]
104943154  cars; cysteine--tRNA ligase, cytoplasmic isoform X1 [KO:K01883] [EC:6.1.1.16]
104968151  mars; methionine--tRNA ligase, cytoplasmic isoform X1 [KO:K01874] [EC:6.1.1.10]
104964527  mars2; methionine--tRNA ligase, mitochondrial [KO:K01874] [EC:6.1.1.10]
104942244  valine--tRNA ligase, mitochondrial-like isoform X1 [KO:K01873] [EC:6.1.1.9]
104965350  lars2; probable leucine--tRNA ligase, mitochondrial [KO:K01869] [EC:6.1.1.4]
104940929  lars; leucine--tRNA ligase, cytoplasmic [KO:K01869] [EC:6.1.1.4]
104942766  iars2; isoleucine--tRNA ligase, mitochondrial [KO:K01870] [EC:6.1.1.5]
104962987  kars; lysine--tRNA ligase isoform X1 [KO:K04567] [EC:6.1.1.6]
104963184  rars; arginine--tRNA ligase, cytoplasmic [KO:K01887] [EC:6.1.1.19]
104967315  rars2; probable arginine--tRNA ligase, mitochondrial [KO:K01887] [EC:6.1.1.19]
104957726  pars2; probable proline--tRNA ligase, mitochondrial [KO:K01881] [EC:6.1.1.15]
104953556  histidine--tRNA ligase, cytoplasmic-like [KO:K01892] [EC:6.1.1.21]
104965061  hars; histidine--tRNA ligase, cytoplasmic isoform X1 [KO:K01892] [EC:6.1.1.21]
104942063  farsa; phenylalanine--tRNA ligase alpha subunit [KO:K01889] [EC:6.1.1.20]
104952722  yars; tyrosine--tRNA ligase, cytoplasmic [KO:K01866] [EC:6.1.1.1]
104955519  yars2; tyrosine--tRNA ligase, mitochondrial [KO:K01866] [EC:6.1.1.1]
104955521  wars; tryptophan--tRNA ligase, cytoplasmic [KO:K01867] [EC:6.1.1.2]
104955796  wars2; tryptophan--tRNA ligase, mitochondrial [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
ncc00250  Alanine, aspartate and glutamate metabolism
ncc00260  Glycine, serine and threonine metabolism
ncc00270  Cysteine and methionine metabolism
ncc00290  Valine, leucine and isoleucine biosynthesis
ncc00330  Arginine and proline metabolism
ncc00340  Histidine metabolism
ncc00380  Tryptophan metabolism
ncc00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   
LinkDB

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