KEGG   PATHWAY: nspu00630
Entry
nspu00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Nocardia sputorum
Class
Metabolism; Carbohydrate metabolism
Pathway map
nspu00630  Glyoxylate and dicarboxylate metabolism
nspu00630

Module
nspu_M00012  Glyoxylate cycle [PATH:nspu00630]
nspu_M00621  Glycine cleavage system [PATH:nspu00630]
nspu_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:nspu00630]
Other DBs
GO: 0046487 0043648
Organism
Nocardia sputorum [GN:nspu]
Gene
IFM12276_58160  isocitrate lyase (AceA) [KO:K01637] [EC:4.1.3.1 4.1.3.30]
IFM12276_44160  acsA; acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
IFM12276_15070  AMP-dependent synthetase [KO:K01895] [EC:6.2.1.1]
IFM12276_37030  glcB; malate synthase G [KO:K01638] [EC:2.3.3.9]
IFM12276_19220  mdh; malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
IFM12276_04010  citrate synthase [KO:K01647] [EC:2.3.3.1]
IFM12276_04040  citrate synthase [KO:K01647] [EC:2.3.3.1]
IFM12276_14550  citrate synthase [KO:K01659] [EC:2.3.3.5]
IFM12276_21220  acnA; aconitate hydratase A [KO:K27802] [EC:4.2.1.3 4.2.1.99]
IFM12276_34680  atoB; acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
IFM12276_35710  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
IFM12276_51650  putative acetyl-CoA acetyltransferase FadA [KO:K00626] [EC:2.3.1.9]
IFM12276_60950  hypothetical protein [KO:K00626] [EC:2.3.1.9]
IFM12276_61070  fadA2; acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
IFM12276_66870  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
IFM12276_01920  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
IFM12276_02100  putative acetyl-CoA acetyltransferase FadA [KO:K00626] [EC:2.3.1.9]
IFM12276_02140  ltp3; acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
IFM12276_06790  fadA3; acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
IFM12276_51660  mce; methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
IFM12276_52790  acetyl-/propionyl-CoA carboxylase subunit alpha [KO:K11263] [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
IFM12276_52740  putative propionyl-CoA carboxylase beta chain 5 AccD5 [KO:K27094] [EC:6.4.1.3 6.4.1.- 2.1.3.15]
IFM12276_52750  hypothetical protein [KO:K27095]
IFM12276_46200  putative propionyl-CoA carboxylase beta chain 6 [KO:K18472] [EC:6.4.1.2 6.4.1.3 2.1.3.15]
IFM12276_36590  methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
IFM12276_36600  putative methylmalonyl-CoA mutase small subunit MutA [KO:K01847] [EC:5.4.99.2]
IFM12276_52480  FAD-linked oxidase [KO:K00104] [EC:1.1.99.14]
IFM12276_67340  catalase [KO:K03781] [EC:1.11.1.6]
IFM12276_27190  gph; hydrolase [KO:K01091] [EC:3.1.3.18]
IFM12276_26840  cbbL; ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [KO:K01601] [EC:4.1.1.39]
IFM12276_26850  ribulose bisphosphate carboxylase small subunit [KO:K01602] [EC:4.1.1.39]
IFM12276_45600  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
IFM12276_45790  glnA2; putative glutamine synthetase 2 [KO:K01915] [EC:6.3.1.2]
IFM12276_48360  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
IFM12276_12490  glnA4-1; glutamine synthetase [KO:K01915] [EC:6.3.1.2]
IFM12276_07050  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
IFM12276_37160  gcvP; putative glycine dehydrogenase (decarboxylating) [KO:K00281] [EC:1.4.4.2]
IFM12276_45250  gcvT; aminomethyltransferase [KO:K00605] [EC:2.1.2.10]
IFM12276_29780  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
IFM12276_58840  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
IFM12276_37220  gcvH_2; glycine cleavage system H protein [KO:K02437]
IFM12276_10260  gcvH_1; glycine cleavage system H protein [KO:K02437]
IFM12276_61600  glxK; glycerate kinase [KO:K00865] [EC:2.7.1.165]
IFM12276_16420  ttuC; tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
IFM12276_08670  putative 2-oxoglutarate dehydrogenase SucA [KO:K01616] [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
IFM12276_57850  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
nspu00010  Glycolysis / Gluconeogenesis
nspu00020  Citrate cycle (TCA cycle)
nspu00030  Pentose phosphate pathway
nspu00053  Ascorbate and aldarate metabolism
nspu00071  Fatty acid degradation
nspu00230  Purine metabolism
nspu00250  Alanine, aspartate and glutamate metabolism
nspu00260  Glycine, serine and threonine metabolism
nspu00620  Pyruvate metabolism
nspu00710  Carbon fixation by Calvin cycle
nspu00750  Vitamin B6 metabolism
nspu00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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