KEGG   PATHWAY: pavi00240
Entry
pavi00240                   Pathway                                
Name
Pyrimidine metabolism - Prunus avium (sweet cherry)
Class
Metabolism; Nucleotide metabolism
Pathway map
pavi00240  Pyrimidine metabolism
pavi00240

Module
pavi_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:pavi00240]
pavi_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:pavi00240]
pavi_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:pavi00240]
pavi_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:pavi00240]
Other DBs
GO: 0006220 0006213
Organism
Prunus avium (sweet cherry) [GN:pavi]
Gene
110770027  carbamoyl-phosphate synthase large chain, chloroplastic [KO:K01955] [EC:6.3.5.5]
110770946  carbamoyl-phosphate synthase small chain, chloroplastic-like [KO:K01956] [EC:6.3.5.5]
110771713  carbamoyl-phosphate synthase small chain, chloroplastic-like [KO:K01956] [EC:6.3.5.5]
110752825  aspartate carbamoyltransferase, chloroplastic [KO:K00609] [EC:2.1.3.2]
110766978  dihydroorotase, mitochondrial isoform X1 [KO:K01465] [EC:3.5.2.3]
110754659  dihydroorotate dehydrogenase (quinone), mitochondrial-like [KO:K00254] [EC:1.3.5.2]
110758996  dihydroorotate dehydrogenase (quinone), mitochondrial-like isoform X1 [KO:K00254] [EC:1.3.5.2]
110772616  uridine 5'-monophosphate synthase [KO:K13421] [EC:2.4.2.10 4.1.1.23]
110771797  UMP-CMP kinase 3-like isoform X1 [KO:K13800] [EC:2.7.4.14]
110750669  UMP-CMP kinase [KO:K13800] [EC:2.7.4.14]
110768069  uncharacterized protein LOC110768069 isoform X1 [KO:K09903] [EC:2.7.4.22]
110752141  nucleoside diphosphate kinase 2, chloroplastic-like [KO:K00940] [EC:2.7.4.6]
110750637  nucleoside diphosphate kinase 1 [KO:K00940] [EC:2.7.4.6]
110766037  probable apyrase 6 [KO:K01510] [EC:3.6.1.5]
110751321  probable apyrase 6 isoform X1 [KO:K01510] [EC:3.6.1.5]
110770308  apyrase 2-like [KO:K14641] [EC:3.6.1.5]
110751007  ectonucleotide pyrophosphatase/phosphodiesterase family member 3 [KO:K01513] [EC:3.1.4.1 3.6.1.9]
110765378  nudix hydrolase 25 [KO:K26955] [EC:3.6.1.17]
110745084  nudix hydrolase 25-like [KO:K26955] [EC:3.6.1.17]
110754223  uncharacterized protein LOC110754223 [KO:K01937] [EC:6.3.4.2]
110754834  CTP synthase-like [KO:K01937] [EC:6.3.4.2]
110749346  CTP synthase [KO:K01937] [EC:6.3.4.2]
110746477  CTP synthase [KO:K01937] [EC:6.3.4.2]
110760138  uridine kinase-like protein 3 [KO:K00876] [EC:2.7.1.48]
110764416  uridine kinase-like protein 1, chloroplastic [KO:K00876] [EC:2.7.1.48]
110756399  uridine kinase-like protein 5 [KO:K00876] [EC:2.7.1.48]
110753391  uridine-cytidine kinase C [KO:K00876] [EC:2.7.1.48]
110757775  uridine-cytidine kinase C [KO:K00876] [EC:2.7.1.48]
110752025  cytosolic 5'-nucleotidase 3A-like [KO:K01081] [EC:3.1.3.5]
110759487  uncharacterized protein LOC110759487 [KO:K03787] [EC:3.1.3.5 3.1.3.6]
110755042  uncharacterized protein LOC110755042 [KO:K03787] [EC:3.1.3.5 3.1.3.6]
110749113  uncharacterized protein LOC110749113 [KO:K03787] [EC:3.1.3.5 3.1.3.6]
110756945  probable uridine nucleosidase 2 isoform X1 [KO:K01240] [EC:3.2.2.3]
110753543  uridine nucleosidase 1 isoform X1 [KO:K01240] [EC:3.2.2.3]
110769858  uracil phosphoribosyltransferase isoform X1 [KO:K00761] [EC:2.4.2.9]
110761605  uncharacterized protein LOC110761605 [KO:K16329] [EC:4.2.1.70]
110752027  7-methylguanosine phosphate-specific 5'-nucleotidase A-like isoform X1 [KO:K24242] [EC:3.1.3.91]
110751152  cytidine deaminase 1-like [KO:K01489] [EC:3.5.4.5]
110750688  ribonucleoside-diphosphate reductase large subunit isoform X1 [KO:K10807] [EC:1.17.4.1]
110747817  ribonucleoside-diphosphate reductase small chain [KO:K10808] [EC:1.17.4.1]
110764370  ribonucleoside-diphosphate reductase small chain [KO:K10808] [EC:1.17.4.1]
110750467  ribonucleoside-diphosphate reductase small chain A isoform X1 [KO:K10808] [EC:1.17.4.1]
110748989  dCTP pyrophosphatase 1-like [KO:K16904] [EC:3.6.1.12]
110757036  dCTP pyrophosphatase 1-like [KO:K16904] [EC:3.6.1.12]
110762368  dCTP pyrophosphatase 1-like [KO:K16904] [EC:3.6.1.12]
110760825  HD domain-containing protein 2 [KO:K07023] [EC:3.1.3.89]
110757764  HD domain-containing protein C4G3.17 [KO:K07023] [EC:3.1.3.89]
110760348  deoxycytidylate deaminase [KO:K01493] [EC:3.5.4.12]
110766082  thymidylate kinase-like isoform X1 [KO:K00943] [EC:2.7.4.9]
110769451  thymidylate kinase-like isoform X1 [KO:K00943] [EC:2.7.4.9]
110767262  deoxyuridine 5'-triphosphate nucleotidohydrolase [KO:K01520] [EC:3.6.1.23]
110749952  thymidine kinase a [KO:K00857] [EC:2.7.1.21]
110771632  thymidine kinase-like [KO:K00857] [EC:2.7.1.21]
110768489  bifunctional dihydrofolate reductase-thymidylate synthase-like [KO:K13998] [EC:1.5.1.3 2.1.1.45]
110746662  dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic [KO:K00207] [EC:1.3.1.2]
110768207  dihydropyrimidinase-like [KO:K01464] [EC:3.5.2.2]
110768212  dihydropyrimidinase-like [KO:K01464] [EC:3.5.2.2]
110774616  beta-ureidopropionase [KO:K01431] [EC:3.5.1.6]
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C00941  3',5'-Cyclic CMP
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
C22509  3',5'-Cyclic UMP
Related
pathway
pavi00030  Pentose phosphate pathway
pavi00220  Arginine biosynthesis
pavi00250  Alanine, aspartate and glutamate metabolism
pavi00280  Valine, leucine and isoleucine degradation
pavi00410  beta-Alanine metabolism
KO pathway
ko00240   
LinkDB

DBGET integrated database retrieval system