KEGG   PATHWAY: pfs01100
Entry
pfs01100                    Pathway                                
Name
Metabolic pathways - Pseudomonas fluorescens SBW25
Class
Pathway map
pfs01100  Metabolic pathways
pfs01100

Module
pfs_M00002  Glycolysis, core module involving three-carbon compounds [PATH:pfs01100]
pfs_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:pfs01100]
pfs_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:pfs01100]
pfs_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:pfs01100]
pfs_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:pfs01100]
pfs_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:pfs01100]
pfs_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:pfs01100]
pfs_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:pfs01100]
pfs_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:pfs01100]
pfs_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:pfs01100]
pfs_M00015  Proline biosynthesis, glutamate => proline [PATH:pfs01100]
pfs_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:pfs01100]
pfs_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:pfs01100]
pfs_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:pfs01100]
pfs_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:pfs01100]
pfs_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:pfs01100]
pfs_M00021  Cysteine biosynthesis, serine => cysteine [PATH:pfs01100]
pfs_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:pfs01100]
pfs_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:pfs01100]
pfs_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:pfs01100]
pfs_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:pfs01100]
pfs_M00035  Methionine degradation [PATH:pfs01100]
pfs_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:pfs01100]
pfs_M00040  Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH:pfs01100]
pfs_M00044  Tyrosine degradation, tyrosine => homogentisate [PATH:pfs01100]
pfs_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:pfs01100]
pfs_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:pfs01100]
pfs_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:pfs01100]
pfs_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:pfs01100]
pfs_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:pfs01100]
pfs_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:pfs01100]
pfs_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:pfs01100]
pfs_M00063  CMP-KDO biosynthesis [PATH:pfs01100]
pfs_M00082  Fatty acid biosynthesis, initiation [PATH:pfs01100]
pfs_M00083  Fatty acid biosynthesis, elongation [PATH:pfs01100]
pfs_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:pfs01100]
pfs_M00087  beta-Oxidation [PATH:pfs01100]
pfs_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:pfs01100]
pfs_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:pfs01100]
pfs_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:pfs01100]
pfs_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:pfs01100]
pfs_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:pfs01100]
pfs_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:pfs01100]
pfs_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:pfs01100]
pfs_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:pfs01100]
pfs_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:pfs01100]
pfs_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:pfs01100]
pfs_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:pfs01100]
pfs_M00134  Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:pfs01100]
pfs_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:pfs01100]
pfs_M00149  Succinate dehydrogenase, prokaryotes [PATH:pfs01100]
pfs_M00151  Cytochrome bc1 complex respiratory unit [PATH:pfs01100]
pfs_M00155  Cytochrome c oxidase, prokaryotes [PATH:pfs01100]
pfs_M00156  Cytochrome c oxidase, cbb3-type [PATH:pfs01100]
pfs_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:pfs01100]
pfs_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:pfs01100]
pfs_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pfs01100]
pfs_M00417  Cytochrome o ubiquinol oxidase [PATH:pfs01100]
pfs_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:pfs01100]
pfs_M00533  Homoprotocatechuate degradation, homoprotocatechuate => 2-oxohept-3-enedioate [PATH:pfs01100]
pfs_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:pfs01100]
pfs_M00552  D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:pfs01100]
pfs_M00555  Betaine biosynthesis, choline => betaine [PATH:pfs01100]
pfs_M00568  Catechol ortho-cleavage, catechol => 3-oxoadipate [PATH:pfs01100]
pfs_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:pfs01100]
pfs_M00621  Glycine cleavage system [PATH:pfs01100]
pfs_M00622  Nicotinate degradation, nicotinate => fumarate [PATH:pfs01100]
pfs_M00637  Anthranilate degradation, anthranilate => catechol [PATH:pfs01100]
pfs_M00793  dTDP-L-rhamnose biosynthesis [PATH:pfs01100]
pfs_M00844  Arginine biosynthesis, ornithine => arginine [PATH:pfs01100]
pfs_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:pfs01100]
pfs_M00879  Arginine succinyltransferase pathway, arginine => glutamate [PATH:pfs01100]
pfs_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:pfs01100]
pfs_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:pfs01100]
pfs_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:pfs01100]
pfs_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:pfs01100]
pfs_M00948  Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate [PATH:pfs01100]
pfs_M00957  Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA [PATH:pfs01100]
pfs_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:pfs01100]
pfs_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:pfs01100]
pfs_M00970  Proline degradation, proline => glutamate [PATH:pfs01100]
pfs_M00975  Betaine degradation, bacteria, betaine => pyruvate [PATH:pfs01100]
Organism
Pseudomonas fluorescens SBW25 [GN:pfs]
Related
pathway
pfs00010  Glycolysis / Gluconeogenesis
pfs00020  Citrate cycle (TCA cycle)
pfs00030  Pentose phosphate pathway
pfs00040  Pentose and glucuronate interconversions
pfs00051  Fructose and mannose metabolism
pfs00052  Galactose metabolism
pfs00053  Ascorbate and aldarate metabolism
pfs00061  Fatty acid biosynthesis
pfs00071  Fatty acid degradation
pfs00130  Ubiquinone and other terpenoid-quinone biosynthesis
pfs00190  Oxidative phosphorylation
pfs00220  Arginine biosynthesis
pfs00230  Purine metabolism
pfs00240  Pyrimidine metabolism
pfs00250  Alanine, aspartate and glutamate metabolism
pfs00260  Glycine, serine and threonine metabolism
pfs00261  Monobactam biosynthesis
pfs00270  Cysteine and methionine metabolism
pfs00280  Valine, leucine and isoleucine degradation
pfs00290  Valine, leucine and isoleucine biosynthesis
pfs00300  Lysine biosynthesis
pfs00310  Lysine degradation
pfs00330  Arginine and proline metabolism
pfs00332  Carbapenem biosynthesis
pfs00340  Histidine metabolism
pfs00350  Tyrosine metabolism
pfs00360  Phenylalanine metabolism
pfs00361  Chlorocyclohexane and chlorobenzene degradation
pfs00362  Benzoate degradation
pfs00364  Fluorobenzoate degradation
pfs00380  Tryptophan metabolism
pfs00400  Phenylalanine, tyrosine and tryptophan biosynthesis
pfs00401  Novobiocin biosynthesis
pfs00410  beta-Alanine metabolism
pfs00430  Taurine and hypotaurine metabolism
pfs00440  Phosphonate and phosphinate metabolism
pfs00450  Selenocompound metabolism
pfs00460  Cyanoamino acid metabolism
pfs00470  D-Amino acid metabolism
pfs00480  Glutathione metabolism
pfs00500  Starch and sucrose metabolism
pfs00520  Amino sugar and nucleotide sugar metabolism
pfs00521  Streptomycin biosynthesis
pfs00523  Polyketide sugar unit biosynthesis
pfs00525  Acarbose and validamycin biosynthesis
pfs00540  Lipopolysaccharide biosynthesis
pfs00541  O-Antigen nucleotide sugar biosynthesis
pfs00543  Exopolysaccharide biosynthesis
pfs00550  Peptidoglycan biosynthesis
pfs00552  Teichoic acid biosynthesis
pfs00561  Glycerolipid metabolism
pfs00562  Inositol phosphate metabolism
pfs00564  Glycerophospholipid metabolism
pfs00565  Ether lipid metabolism
pfs00592  alpha-Linolenic acid metabolism
pfs00620  Pyruvate metabolism
pfs00622  Xylene degradation
pfs00623  Toluene degradation
pfs00625  Chloroalkane and chloroalkene degradation
pfs00626  Naphthalene degradation
pfs00627  Aminobenzoate degradation
pfs00630  Glyoxylate and dicarboxylate metabolism
pfs00633  Nitrotoluene degradation
pfs00640  Propanoate metabolism
pfs00643  Styrene degradation
pfs00650  Butanoate metabolism
pfs00660  C5-Branched dibasic acid metabolism
pfs00670  One carbon pool by folate
pfs00680  Methane metabolism
pfs00710  Carbon fixation by Calvin cycle
pfs00720  Other carbon fixation pathways
pfs00730  Thiamine metabolism
pfs00740  Riboflavin metabolism
pfs00750  Vitamin B6 metabolism
pfs00760  Nicotinate and nicotinamide metabolism
pfs00770  Pantothenate and CoA biosynthesis
pfs00780  Biotin metabolism
pfs00785  Lipoic acid metabolism
pfs00790  Folate biosynthesis
pfs00791  Atrazine degradation
pfs00860  Porphyrin metabolism
pfs00900  Terpenoid backbone biosynthesis
pfs00907  Pinene, camphor and geraniol degradation
pfs00910  Nitrogen metabolism
pfs00920  Sulfur metabolism
pfs00930  Caprolactam degradation
pfs00946  Degradation of flavonoids
pfs00996  Biosynthesis of various alkaloids
pfs00999  Biosynthesis of various plant secondary metabolites
pfs01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   
LinkDB

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