KEGG   PATHWAY: pfs00230
Entry
pfs00230                    Pathway                                
Name
Purine metabolism - Pseudomonas fluorescens SBW25
Class
Metabolism; Nucleotide metabolism
Pathway map
pfs00230  Purine metabolism
pfs00230

Module
pfs_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:pfs00230]
pfs_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:pfs00230]
pfs_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:pfs00230]
pfs_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:pfs00230]
pfs_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:pfs00230]
pfs_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:pfs00230]
pfs_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:pfs00230]
Other DBs
GO: 0006163 0042278
Organism
Pseudomonas fluorescens SBW25 [GN:pfs]
Gene
PFLU_0495  ADP-ribose diphosphatase (EC (ADP-ribose phosphohydrolase) (ADP-ribose pyrophosphatase) (Adenosine diphosphoribose pyrophosphatase) [KO:K01515] [EC:3.6.1.13 3.6.1.-]
PFLU_0283  nudE; ADP compounds hydrolase (EC [KO:K08312] [EC:3.6.1.-]
PFLU_3157  Phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
PFLU_5986  Putative phosphomannomutase/phosphoglucomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
PFLU_0732  prs; Ribose-phosphate pyrophosphokinase (RPPK) (EC (5-phospho-D-ribosyl alpha-1-diphosphate) (Phosphoribosyl diphosphate synthase) (Phosphoribosyl pyrophosphate synthase) (P-Rib-PP synthase) (PRPP synthase) (PRPPase) [KO:K00948] [EC:2.7.6.1]
PFLU_4183  Amidophosphoribosyltransferase (ATase) (EC (Glutamine phosphoribosylpyrophosphate amidotransferase) (GPATase) [KO:K00764] [EC:2.4.2.14]
PFLU_0611  purD; Phosphoribosylamine--glycine ligase (EC (GARS) (Glycinamide ribonucleotide synthetase) (Phosphoribosylglycinamide synthetase) [KO:K01945] [EC:6.3.4.13]
PFLU_4500  Phosphoribosylglycinamide formyltransferase (EC (5'-phosphoribosylglycinamide transformylase) (GAR transformylase) (GART) [KO:K11175] [EC:2.1.2.2]
PFLU_5017  Formate-dependent phosphoribosylglycinamide formyltransferase (5'-phosphoribosylglycinamide transformylase 2) (Formate-dependent GAR transformylase) (EC (GAR transformylase 2) (GART 2) (Non-folate glycinamide ribonucleotide transformylase) (Phosphoribosylglycinamide formyltransferase 2) [KO:K08289] [EC:6.3.1.21]
PFLU_5034  Phosphoribosylformylglycinamidine synthase (FGAM synthase) (FGAMS) (EC (Formylglycinamide ribonucleotide amidotransferase) (FGAR amidotransferase) (FGAR-AT) [KO:K01952] [EC:6.3.5.3]
PFLU_4499  Phosphoribosylformylglycinamidine cyclo-ligase (EC (AIR synthase) (AIRS) (Phosphoribosyl-aminoimidazole synthetase) [KO:K01933] [EC:6.3.3.1]
PFLU_6054  purK; N5-carboxyaminoimidazole ribonucleotide synthase (N5-CAIR synthase) (EC (5-(carboxyamino)imidazole ribonucleotide synthetase) [KO:K01589] [EC:6.3.4.18]
PFLU_6055  purE; N5-carboxyaminoimidazole ribonucleotide mutase (N5-CAIR mutase) (EC (5-(carboxyamino)imidazole ribonucleotide mutase) [KO:K01588] [EC:5.4.99.18]
PFLU_1480  purC; Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC (SAICAR synthetase) [KO:K01923] [EC:6.3.2.6]
PFLU_3813  Adenylosuccinate lyase (ASL) (EC (Adenylosuccinase) [KO:K01756] [EC:4.3.2.2]
PFLU_0612  purH; Bifunctional purine biosynthesis protein PurH [Includes: Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC (AICAR transformylase); IMP cyclohydrolase (EC (ATIC) (IMP synthase) (Inosinicase)] [KO:K00602] [EC:2.1.2.3 3.5.4.10]
PFLU_4571  Adenine phosphoribosyltransferase (APRT) (EC [KO:K00759] [EC:2.4.2.7]
PFLU_1708  Putative 5'-nucleotidase [KO:K01081] [EC:3.1.3.5]
PFLU_2214  5'-nucleotidase (EC [KO:K03787] [EC:3.1.3.5 3.1.3.6]
PFLU_1299  surE; 5'-nucleotidase SurE (EC (Nucleoside 5'-monophosphate phosphohydrolase) [KO:K03787] [EC:3.1.3.5 3.1.3.6]
PFLU_0282  Putative hydrolase [KO:K20881] [EC:3.1.3.-]
PFLU_4399  Pyrimidine/purine nucleoside phosphorylase (EC (Adenosine phosphorylase) (Cytidine phosphorylase) (Guanosine phosphorylase) (EC (Inosine phosphorylase) (Thymidine phosphorylase) (EC (Uridine phosphorylase) (EC (Xanthosine phosphorylase) [KO:K09913] [EC:2.4.2.1 2.4.2.2]
PFLU_0781  Purine nucleoside phosphorylase [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
PFLU_3394  Uncharacterized protein [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
PFLU_0900  Putative hypoxanthine-guanine phosphoribosyltransferase [KO:K00760] [EC:2.4.2.8]
PFLU_5044  Inosine-5'-monophosphate dehydrogenase (IMP dehydrogenase) (IMPD) (IMPDH) (EC [KO:K00088] [EC:1.1.1.205]
PFLU_5061  Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC (Nucleoside-2-P kinase) [KO:K00940] [EC:2.7.4.6]
PFLU_5769  conserved hypothetical protein [KO:K01519] [EC:3.6.1.66]
PFLU_5962  xpt; Xanthine phosphoribosyltransferase (XPRTase) (EC [KO:K03816] [EC:2.4.2.22]
PFLU_4592  Putative xanthine dehydrogenase (EC [KO:K13481] [EC:1.17.1.4]
PFLU_4593  Putative xanthine dehydrogenase large subunit (EC [KO:K13482] [EC:1.17.1.4]
PFLU_5348  Putative dehydrogenase [KO:K11177] [EC:1.17.1.4]
PFLU_5349  Putative oxidoreductase [KO:K11178] [EC:1.17.1.4]
PFLU_5350  Putative dehydrogenase [KO:K13483]
PFLU_5043  GMP synthase (glutamine-hydrolyzing) [KO:K01951] [EC:6.3.5.2]
PFLU_4595  Guanine deaminase (Guanase) (EC (Guanine aminohydrolase) [KO:K01487] [EC:3.5.4.3]
PFLU_5993  gmk; Guanylate kinase (EC (GMP kinase) [KO:K00942] [EC:2.7.4.8]
PFLU_4726  Ribonucleoside-diphosphate reductase (EC [KO:K00525] [EC:1.17.4.1]
PFLU_2783  Ribonucleoside-diphosphate reductase subunit beta (EC [KO:K00526] [EC:1.17.4.1]
PFLU_4768  Ribonucleoside-diphosphate reductase subunit beta (EC [KO:K00526] [EC:1.17.4.1]
PFLU_1742  Putative deoxyguanosinetriphosphate triphosphohydrolase [KO:K01129] [EC:3.1.5.1]
PFLU_5995  spoT; Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase (EC [KO:K01139] [EC:2.7.6.5 3.1.7.2]
PFLU_5911  ppx; Exopolyphosphatase (EC [KO:K01524] [EC:3.6.1.11 3.6.1.40]
PFLU_4505  GTP pyrophosphokinase (EC [KO:K00951] [EC:2.7.6.5]
PFLU_1597  RelA_SpoT domain-containing protein [KO:K07816] [EC:2.7.6.5]
PFLU_5940  Putative ademylate cyclase [KO:K05851] [EC:4.6.1.1]
PFLU_0525  purA; Adenylosuccinate synthetase (AMPSase) (AdSS) (EC (IMP--aspartate ligase) [KO:K01939] [EC:6.3.4.4]
PFLU_5396  amn; AMP nucleosidase (EC [KO:K01241] [EC:3.2.2.4]
PFLU_1619  AMP nucleosidase (EC [KO:K06966] [EC:3.2.2.10 3.2.2.-]
PFLU_0667  Adenine deaminase (ADE) (EC (Adenine aminohydrolase) (AAH) [KO:K21053] [EC:3.5.4.2]
PFLU_1240  adk; Adenylate kinase (AK) (EC (ATP-AMP transphosphorylase) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase) [KO:K00939] [EC:2.7.4.3]
PFLU_4504  Uncharacterized protein [KO:K04765] [EC:3.6.1.9]
PFLU_0497  3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA (3',5'-cyclic AMP phosphodiesterase) (cAMP phosphodiesterase) (EC [KO:K03651] [EC:3.1.4.53]
PFLU_3573  3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA (3',5'-cyclic AMP phosphodiesterase) (cAMP phosphodiesterase) (EC [KO:K03651] [EC:3.1.4.53]
PFLU_5580  apaH; Bis(5'-nucleosyl)-tetraphosphatase, symmetrical (EC (Ap4A hydrolase) (Diadenosine 5',5'''-P1,P4-tetraphosphate pyrophosphohydrolase) (Diadenosine tetraphosphatase) [KO:K01525] [EC:3.6.1.41]
PFLU_0761  cysN; Multifunctional fusion protein [Includes: Sulfate adenylyltransferase subunit 1 (EC (ATP-sulfurylase large subunit) (Sulfate adenylate transferase) (SAT); Adenylyl-sulfate kinase (EC (APS kinase) (ATP adenosine-5'-phosphosulfate 3'-phosphotransferase) (Adenosine-5'-phosphosulfate kinase)] [KO:K00955] [EC:2.7.7.4 2.7.1.25]
PFLU_2097  cysC; Adenylyl-sulfate kinase (EC (APS kinase) (ATP adenosine-5'-phosphosulfate 3'-phosphotransferase) (Adenosine-5'-phosphosulfate kinase) [KO:K00860] [EC:2.7.1.25]
PFLU_0760  cysD; Sulfate adenylyltransferase subunit 2 (EC (ATP-sulfurylase small subunit) (Sulfate adenylate transferase) (SAT) [KO:K00957] [EC:2.7.7.4]
PFLU_0193  5-hydroxyisourate hydrolase (HIU hydrolase) (HIUHase) (EC [KO:K07127] [EC:3.5.2.17]
PFLU_4358  5-hydroxyisourate hydrolase (HIU hydrolase) (HIUHase) (EC [KO:K07127] [EC:3.5.2.17]
PFLU_4360  2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase (EC [KO:K13485] [EC:4.1.1.97]
PFLU_4644  Putative racemase [KO:K16841] [EC:5.1.99.3]
PFLU_4359  NodB homology domain-containing protein [KO:K16842] [EC:3.5.2.5]
PFLU_4361  Probable allantoicase (EC (Allantoate amidinohydrolase) [KO:K01477] [EC:3.5.3.4]
PFLU_4362  allA; Ureidoglycolate lyase (EC (Ureidoglycolatase) [KO:K01483] [EC:4.3.2.3]
PFLU_0578  ureC; Urease subunit alpha (EC (Urea amidohydrolase subunit alpha) [KO:K01428] [EC:3.5.1.5]
PFLU_0579  ureB; Urease subunit beta (EC (Urea amidohydrolase subunit beta) [KO:K01429] [EC:3.5.1.5]
PFLU_0582  ureA; Urease subunit gamma (EC (Urea amidohydrolase subunit gamma) [KO:K01430] [EC:3.5.1.5]
PFLU_4893  Carbamate kinase [KO:K00926] [EC:2.7.2.2]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
pfs00030  Pentose phosphate pathway
pfs00220  Arginine biosynthesis
pfs00250  Alanine, aspartate and glutamate metabolism
pfs00260  Glycine, serine and threonine metabolism
pfs00340  Histidine metabolism
pfs00630  Glyoxylate and dicarboxylate metabolism
pfs00730  Thiamine metabolism
pfs00740  Riboflavin metabolism
pfs00790  Folate biosynthesis
KO pathway
ko00230   
LinkDB

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