KEGG   PATHWAY: phai00970
Entry
phai00970                   Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Panicum hallii (Hall's panicgrass)
Class
Genetic Information Processing; Translation
Pathway map
phai00970  Aminoacyl-tRNA biosynthesis
phai00970

Organism
Panicum hallii (Hall's panicgrass) [GN:phai]
Gene
112874169  glutamate--tRNA ligase, chloroplastic/mitochondrial [KO:K01885] [EC:6.1.1.17]
112899755  glutamate--tRNA ligase, cytoplasmic [KO:K01885] [EC:6.1.1.17]
112899366  glutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic/mitochondrial [KO:K02433] [EC:6.3.5.6 6.3.5.7]
112902465  glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial [KO:K02434] [EC:6.3.5.6 6.3.5.7]
112875726  glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial [KO:K02435] [EC:6.3.5.6 6.3.5.7]
112894204  glutamine--tRNA ligase-like [KO:K01886] [EC:6.1.1.18]
112887051  glutamine--tRNA ligase-like [KO:K01886] [EC:6.1.1.18]
112874655  alanine--tRNA ligase [KO:K01872] [EC:6.1.1.7]
112889772  alanine--tRNA ligase, chloroplastic/mitochondrial [KO:K01872] [EC:6.1.1.7]
112894537  aspartate--tRNA ligase 2, cytoplasmic-like [KO:K22503] [EC:6.1.1.12]
112893107  aspartate--tRNA ligase, chloroplastic/mitochondrial [KO:K01876] [EC:6.1.1.12]
112887906  asparagine--tRNA ligase, cytoplasmic 2-like [KO:K01893] [EC:6.1.1.22]
112879875  asparagine--tRNA ligase, chloroplastic/mitochondrial [KO:K01893] [EC:6.1.1.22]
112893914  asparagine--tRNA ligase, cytoplasmic 1-like [KO:K01893] [EC:6.1.1.22]
112896291  glycine--tRNA ligase, mitochondrial 1-like [KO:K01880] [EC:6.1.1.14]
112899028  glycine--tRNA ligase, mitochondrial 1-like [KO:K01880] [EC:6.1.1.14]
112889024  glycine--tRNA ligase, chloroplastic/mitochondrial 2 isoform X1 [KO:K14164] [EC:6.1.1.14]
112881677  threonine--tRNA ligase, chloroplastic/mitochondrial 2 [KO:K01868] [EC:6.1.1.3]
112888126  threonine--tRNA ligase, mitochondrial 1-like [KO:K01868] [EC:6.1.1.3]
112903075  threonine--tRNA ligase, mitochondrial 1-like [KO:K01868] [EC:6.1.1.3]
112903071  serine--tRNA ligase, chloroplastic/mitochondrial isoform X1 [KO:K01875] [EC:6.1.1.11]
112877254  serine--tRNA ligase [KO:K01875] [EC:6.1.1.11]
112886911  cysteine--tRNA ligase CPS1, chloroplastic/mitochondrial-like [KO:K01883] [EC:6.1.1.16]
112879292  cysteine--tRNA ligase CPS1, chloroplastic/mitochondrial isoform X1 [KO:K01883] [EC:6.1.1.16]
112874488  methionine--tRNA ligase, chloroplastic/mitochondrial isoform X1 [KO:K01874] [EC:6.1.1.10]
112876677  probable methionine--tRNA ligase isoform X1 [KO:K01874] [EC:6.1.1.10]
112876918  probable methionine--tRNA ligase isoform X1 [KO:K01874] [EC:6.1.1.10]
112893936  uncharacterized protein LOC112893936 [KO:K00604] [EC:2.1.2.9]
112874477  LOW QUALITY PROTEIN: valine--tRNA ligase, mitochondrial 1-like [KO:K01873] [EC:6.1.1.9]
112880238  valine--tRNA ligase, chloroplastic/mitochondrial 2 isoform X1 [KO:K01873] [EC:6.1.1.9]
112880657  valine--tRNA ligase, mitochondrial 1 [KO:K01873] [EC:6.1.1.9]
112874141  leucine--tRNA ligase, cytoplasmic-like [KO:K01869] [EC:6.1.1.4]
112887384  leucine--tRNA ligase, cytoplasmic-like [KO:K01869] [EC:6.1.1.4]
112892178  leucine--tRNA ligase, chloroplastic/mitochondrial [KO:K01869] [EC:6.1.1.4]
112888831  isoleucine--tRNA ligase, cytoplasmic [KO:K01870] [EC:6.1.1.5]
112878854  isoleucine--tRNA ligase, chloroplastic/mitochondrial isoform X1 [KO:K01870] [EC:6.1.1.5]
112876620  lysine--tRNA ligase [KO:K04567] [EC:6.1.1.6]
112890921  lysine--tRNA ligase, chloroplastic/mitochondrial [KO:K04567] [EC:6.1.1.6]
112884310  arginine--tRNA ligase, cytoplasmic-like [KO:K01887] [EC:6.1.1.19]
112885846  proline--tRNA ligase, cytoplasmic [KO:K01881] [EC:6.1.1.15]
112880734  proline--tRNA ligase, chloroplastic/mitochondrial [KO:K01881] [EC:6.1.1.15]
112887984  histidine--tRNA ligase, cytoplasmic [KO:K01892] [EC:6.1.1.21]
112880418  histidine--tRNA ligase, chloroplastic/mitochondrial [KO:K01892] [EC:6.1.1.21]
112885719  phenylalanine--tRNA ligase, chloroplastic/mitochondrial [KO:K01889] [EC:6.1.1.20]
112889777  phenylalanine--tRNA ligase alpha subunit, cytoplasmic [KO:K01889] [EC:6.1.1.20]
112884377  phenylalanine--tRNA ligase beta subunit, cytoplasmic isoform X1 [KO:K01890] [EC:6.1.1.20]
112898520  tyrosine--tRNA ligase 1, cytoplasmic [KO:K01866] [EC:6.1.1.1]
112877951  tyrosine--tRNA ligase, chloroplastic/mitochondrial [KO:K01866] [EC:6.1.1.1]
112892542  tyrosine--tRNA ligase 1, cytoplasmic-like [KO:K01866] [EC:6.1.1.1]
112885554  tryptophan--tRNA ligase, cytoplasmic-like [KO:K01867] [EC:6.1.1.2]
112877824  tryptophan--tRNA ligase, cytoplasmic-like isoform X1 [KO:K01867] [EC:6.1.1.2]
112893649  tryptophan--tRNA ligase, chloroplastic/mitochondrial isoform X1 [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
phai00250  Alanine, aspartate and glutamate metabolism
phai00260  Glycine, serine and threonine metabolism
phai00270  Cysteine and methionine metabolism
phai00290  Valine, leucine and isoleucine biosynthesis
phai00300  Lysine biosynthesis
phai00330  Arginine and proline metabolism
phai00340  Histidine metabolism
phai00380  Tryptophan metabolism
phai00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   
LinkDB

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