KEGG   PATHWAY: ppac00010
Entry
ppac00010                   Pathway                                
Name
Glycolysis / Gluconeogenesis - Palaeococcus pacificus
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
ppac00010  Glycolysis / Gluconeogenesis
ppac00010

Module
ppac_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:ppac00010]
ppac_M00002  Glycolysis, core module involving three-carbon compounds [PATH:ppac00010]
ppac_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:ppac00010]
ppac_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:ppac00010]
Other DBs
GO: 0006096 0006094
Organism
Palaeococcus pacificus [GN:ppac]
Gene
PAP_01425  glucose-6-phosphate isomerase [KO:K06859] [EC:5.3.1.9]
PAP_04875  phosphofructokinase [KO:K00918] [EC:2.7.1.146 2.7.1.147]
PAP_01430  ADP-dependent glucokinase [KO:K00918] [EC:2.7.1.146 2.7.1.147]
PAP_03775  fructose-bisphosphate aldolase [KO:K11645] [EC:4.1.2.13]
PAP_10130  fructose-1 6-bisphosphatase [KO:K01622] [EC:4.1.2.13 3.1.3.11]
PAP_09970  triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
PAP_02855  glyceraldehyde-3-phosphate dehydrogenase [KO:K00150] [EC:1.2.1.59]
PAP_04615  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
PAP_04825  phosphoglyceromutase [KO:K01834] [EC:5.4.2.11]
PAP_01310  phosphoglycerate mutase [KO:K15635] [EC:5.4.2.12]
PAP_04410  eno; enolase [KO:K01689] [EC:4.2.1.11]
PAP_01940  hypothetical protein [KO:K01689] [EC:4.2.1.11]
PAP_08515  hypothetical protein [KO:K00873] [EC:2.7.1.40]
PAP_01340  phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
PAP_04325  porA; 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha [KO:K00169] [EC:1.2.7.1]
PAP_04330  pyruvate ferredoxin oxidoreductase subunit beta [KO:K00170] [EC:1.2.7.1]
PAP_04300  pyruvate ferredoxin oxidoreductase subunit gamma [KO:K00189] [EC:1.2.7.7 1.2.7.1]
PAP_04320  porD; pyuvate ferredoxin oxidoreductase subunit delta [KO:K00171] [EC:1.2.7.1]
PAP_05650  2-oxoglutarate ferredoxin oxidoreductase subunit alpha [KO:K00174] [EC:1.2.7.3 1.2.7.11]
PAP_05665  2-oxoglutarate ferredoxin oxidoreductase subunit alpha [KO:K00174] [EC:1.2.7.3 1.2.7.11]
PAP_03305  2-oxoacid:ferredoxin oxidoreductase subunit alpha [KO:K00174] [EC:1.2.7.3 1.2.7.11]
PAP_05655  2-oxoglutarate synthase [KO:K00175] [EC:1.2.7.3 1.2.7.11]
PAP_05670  2-oxoglutarate synthase [KO:K00175] [EC:1.2.7.3 1.2.7.11]
PAP_03310  2-oxoacid ferredoxin oxidoreductase subunit beta [KO:K00175] [EC:1.2.7.3 1.2.7.11]
PAP_03610  acetyl CoA synthetase [KO:K01905] [EC:6.2.1.13]
PAP_05270  acetyl-CoA synthetase [KO:K01905] [EC:6.2.1.13]
PAP_05870  CoA-binding protein [KO:K01905] [EC:6.2.1.13]
PAP_00035  CoA-binding protein [KO:K01905] [EC:6.2.1.13]
PAP_05875  acetyl-CoA synthetase [KO:K22224] [EC:6.2.1.13]
PAP_06970  acetyl-CoA synthetase [KO:K22224] [EC:6.2.1.13]
PAP_01450  bifunctional phosphomannomutase/phosphoglucomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
PAP_09975  glyceraldehyde-3-phosphate:ferredoxin oxidoreductase [KO:K11389] [EC:1.2.7.6]
PAP_03390  aldehyde dehydrogenase [KO:K18978] [EC:1.2.1.90]
PAP_02550  phosphoenolpyruvate carboxykinase [KO:K01596] [EC:4.1.1.32]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
ppac00020  Citrate cycle (TCA cycle)
ppac00030  Pentose phosphate pathway
ppac00500  Starch and sucrose metabolism
ppac00620  Pyruvate metabolism
ppac00640  Propanoate metabolism
ppac00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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