KEGG   PATHWAY: ppq00230
Entry
ppq00230                    Pathway                                
Name
Purine metabolism - Paenibacillus polymyxa SQR-21
Class
Metabolism; Nucleotide metabolism
Pathway map
ppq00230  Purine metabolism
ppq00230

Module
ppq_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:ppq00230]
ppq_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:ppq00230]
ppq_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:ppq00230]
ppq_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:ppq00230]
ppq_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:ppq00230]
Other DBs
GO: 0006163 0042278
Organism
Paenibacillus polymyxa SQR-21 [GN:ppq]
Gene
PPSQR21_029720  mutT; nudix hydrolase [KO:K01515] [EC:3.6.1.13 3.6.1.-]
PPSQR21_044010  phosphopentomutase [KO:K01839] [EC:5.4.2.7]
PPSQR21_006280  deoB; phosphopentomutase [KO:K01839] [EC:5.4.2.7]
PPSQR21_046900  glucose-1,6-bisphosphate synthase [KO:K01835] [EC:5.4.2.2]
PPSQR21_000380  prsA; ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
PPSQR21_008300  purF; amidophosphoribosyltransferase [KO:K00764] [EC:2.4.2.14]
PPSQR21_008350  purD; phosphoribosylamine--glycine ligase [KO:K01945] [EC:6.3.4.13]
PPSQR21_008330  purN; folate-dependent phosphoribosylglycinamide formyltransferase purn [KO:K11175] [EC:2.1.2.2]
PPSQR21_028190  purT; phosphoribosylglycinamide formyltransferase 2 [KO:K08289] [EC:6.3.1.21]
PPSQR21_008290  phosphoribosylformylglycinamidine synthase 2 [KO:K23269] [EC:6.3.5.3]
PPSQR21_008270  purS; phosphoribosylformylglycinamidine synthase subunit PurS [KO:K23264] [EC:6.3.5.3]
PPSQR21_008280  purL; phosphoribosylformylglycinamidine synthase 1 [KO:K23265] [EC:6.3.5.3 3.5.1.2]
PPSQR21_008320  purM; phosphoribosylformylglycinamidine cyclo-ligase [KO:K01933] [EC:6.3.3.1]
PPSQR21_008230  purK; phosphoribosylaminoimidazole carboxylase [KO:K01589] [EC:6.3.4.18]
PPSQR21_008220  purE; phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit [KO:K01588] [EC:5.4.99.18]
PPSQR21_008260  purC; phosphoribosylaminoimidazolesuccinocarboxamide synthase [KO:K01923] [EC:6.3.2.6]
PPSQR21_008240  purB; adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
PPSQR21_008340  purH; phosphoribosylaminoimidazole carboxy formyl formyltransferase and inosine-monophosphate cyclohydrolase [KO:K00602] [EC:2.1.2.3 3.5.4.10]
PPSQR21_038600  adenine phosphoribosyltransferase [KO:K00759] [EC:2.4.2.7]
PPSQR21_016370  5'-nucleotidase [KO:K01081] [EC:3.1.3.5]
PPSQR21_011300  5'-nucleotidase [KO:K11751] [EC:3.1.3.5 3.6.1.45]
PPSQR21_029660  purine nucleoside phosphorylase [KO:K03783] [EC:2.4.2.1]
PPSQR21_006250  pnp; purine nucleoside phosphorylase [KO:K03783] [EC:2.4.2.1]
PPSQR21_044000  deoD; purine nucleoside phosphorylase [KO:K03784] [EC:2.4.2.1]
PPSQR21_013410  protein of hypothetical function duf1255 [KO:K09913] [EC:2.4.2.1 2.4.2.2]
PPSQR21_033400  yfiH; yfiH [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
PPSQR21_000570  hpt; hypoxanthine phosphoribosyltransferase [KO:K00760] [EC:2.4.2.8]
PPSQR21_000880  guaB; inosine-5'-monophosphate dehydrogenase [KO:K00088] [EC:1.1.1.205]
PPSQR21_029040  ndk; nucleoside diphosphate kinase (ndk) (ndp kinase)(nucleoside-2-p kinase) [KO:K00940] [EC:2.7.4.6]
PPSQR21_039860  ribonuclease ph/ham1 protein [KO:K01519] [EC:3.6.1.66]
PPSQR21_050060  adenine/guanine phosphoribosyltransferase [KO:K03816] [EC:2.4.2.22]
PPSQR21_018130  xanthine phosphoribosyltransferase [KO:K03816] [EC:2.4.2.22]
PPSQR21_008010  guaA; GMP synthase [KO:K01951] [EC:6.3.5.2]
PPSQR21_006270  CMP/dCMP deaminase zinc-binding protein [KO:K01487] [EC:3.5.4.3]
PPSQR21_030850  gmk; guanylate kinase [KO:K00942] [EC:2.7.4.8]
PPSQR21_005070  nrdA; ribonucleotide-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
PPSQR21_018520  ribonucleotide-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
PPSQR21_005060  nrdF; ribonucleoside-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
PPSQR21_018510  ribonucleoside-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
PPSQR21_048220  nrdD; anaerobic ribonucleoside-triphosphate reductase [KO:K21636] [EC:1.1.98.6]
PPSQR21_011720  dgt; deoxyguanosinetriphosphate triphosphohydrolase [KO:K01129] [EC:3.1.5.1]
PPSQR21_009200  sec-independent protein translocase, tatc subunit [KO:K15518] [EC:2.7.1.113]
PPSQR21_038570  spoT; GTP pyrophosphokinase [KO:K01139] [EC:2.7.6.5 3.1.7.2]
PPSQR21_041270  gppA; exopolyphosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
PPSQR21_005810  GTP pyrophosphokinase [KO:K07816] [EC:2.7.6.5]
PPSQR21_018030  rela/spot domain-containing protein [KO:K07816] [EC:2.7.6.5]
PPSQR21_041000  rela/spot domain-containing protein [KO:K07816] [EC:2.7.6.5]
PPSQR21_051410  purA; adenylosuccinate synthetase [KO:K01939] [EC:6.3.4.4]
PPSQR21_009210  deoxyguanosine kinase [KO:K15519] [EC:2.7.1.76 2.7.1.74]
PPSQR21_018660  adeC; adenine deaminase [KO:K01486] [EC:3.5.4.2]
PPSQR21_048350  adenine deaminase [KO:K01486] [EC:3.5.4.2]
PPSQR21_004370  ushA; 5'-nucleotidase [KO:K01119] [EC:3.1.4.16 3.1.3.6]
PPSQR21_043850  5'-nucleotidase [KO:K01119] [EC:3.1.4.16 3.1.3.6]
PPSQR21_020460  phosphoesterase [KO:K09769] [EC:3.1.4.16]
PPSQR21_045150  adenylate kinase [KO:K00939] [EC:2.7.4.3]
PPSQR21_025910  cysC; binfunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase [KO:K00860] [EC:2.7.1.25]
PPSQR21_045020  mET3; ATP sulfurylase (sulfate adenylyltransferase) [KO:K00958] [EC:2.7.7.4]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
ppq00030  Pentose phosphate pathway
ppq00220  Arginine biosynthesis
ppq00250  Alanine, aspartate and glutamate metabolism
ppq00260  Glycine, serine and threonine metabolism
ppq00340  Histidine metabolism
ppq00630  Glyoxylate and dicarboxylate metabolism
ppq00730  Thiamine metabolism
ppq00740  Riboflavin metabolism
ppq00790  Folate biosynthesis
KO pathway
ko00230   
LinkDB

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