KEGG   PATHWAY: ppyr00900
Entry
ppyr00900                   Pathway                                
Name
Terpenoid backbone biosynthesis - Photinus pyralis (common eastern firefly)
Description
Terpenoids, also known as isoprenoids, are a large class of natural products consisting of isoprene (C5) units. There are two biosynthetic pathways, the mevalonate pathway [MD:M00095] and the non-mevalonate pathway or the MEP/DOXP pathway [MD:M00096], for the terpenoid building blocks: isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). The action of prenyltransferases then generates higher-order building blocks: geranyl diphosphate (GPP), farsenyl diphosphate (FPP), and geranylgeranyl diphosphate (GGPP), which are the precursors of monoterpenoids (C10), sesquiterpenoids (C15), and diterpenoids (C20), respectively. Condensation of these building blocks gives rise to the precursors of sterols (C30) and carotenoids (C40). The MEP/DOXP pathway is absent in higher animals and fungi, but in green plants the MEP/DOXP and mevalonate pathways co-exist in separate cellular compartments. The MEP/DOXP pathway, operating in the plastids, is responsible for the formation of essential oil monoterpenes and linalyl acetate, some sesquiterpenes, diterpenes, and carotenoids and phytol. The mevalonate pathway, operating in the cytosol, gives rise to triterpenes, sterols, and most sesquiterpenes.
Class
Metabolism; Metabolism of terpenoids and polyketides
Pathway map
ppyr00900  Terpenoid backbone biosynthesis
ppyr00900

Module
ppyr_M00095  C5 isoprenoid biosynthesis, mevalonate pathway [PATH:ppyr00900]
ppyr_M00367  C10-C20 isoprenoid biosynthesis, non-plant eukaryotes [PATH:ppyr00900]
Other DBs
GO: 0009240 0016091
Organism
Photinus pyralis (common eastern firefly) [GN:ppyr]
Gene
116159031  acetyl-CoA acetyltransferase, cytosolic [KO:K00626] [EC:2.3.1.9]
116162757  acetyl-CoA acetyltransferase, mitochondrial [KO:K00626] [EC:2.3.1.9]
116160050  hydroxymethylglutaryl-CoA synthase 1-like [KO:K01641] [EC:2.3.3.10]
116160051  hydroxymethylglutaryl-CoA synthase 1-like [KO:K01641] [EC:2.3.3.10]
116165087  3-hydroxy-3-methylglutaryl-coenzyme A reductase-like isoform X1 [KO:K00021] [EC:1.1.1.34]
116165442  3-hydroxy-3-methylglutaryl-coenzyme A reductase-like [KO:K00021] [EC:1.1.1.34]
116165673  3-hydroxy-3-methylglutaryl-coenzyme A reductase-like [KO:K00021] [EC:1.1.1.34]
116168296  mevalonate kinase [KO:K00869] [EC:2.7.1.36]
116162977  probable phosphomevalonate kinase isoform X1 [KO:K13273] [EC:2.7.4.2]
116173886  diphosphomevalonate decarboxylase isoform X1 [KO:K01597] [EC:4.1.1.33]
116160024  isopentenyl-diphosphate Delta-isomerase 1-like isoform X1 [KO:K01823] [EC:5.3.3.2]
116173024  isopentenyl-diphosphate Delta-isomerase 1-like isoform X1 [KO:K01823] [EC:5.3.3.2]
116173039  isopentenyl-diphosphate Delta-isomerase 1-like [KO:K01823] [EC:5.3.3.2]
116173048  isopentenyl-diphosphate Delta-isomerase 1-like [KO:K01823] [EC:5.3.3.2]
116177996  farnesyl pyrophosphate synthase-like isoform X1 [KO:K00787] [EC:2.5.1.1 2.5.1.10]
116178734  farnesyl pyrophosphate synthase-like isoform X1 [KO:K00787] [EC:2.5.1.1 2.5.1.10]
116159258  farnesyl pyrophosphate synthase-like [KO:K00787] [EC:2.5.1.1 2.5.1.10]
116159897  farnesyl diphosphate synthase 2-like [KO:K00787] [EC:2.5.1.1 2.5.1.10]
116160432  farnesyl pyrophosphate synthase-like [KO:K00787] [EC:2.5.1.1 2.5.1.10]
116161331  farnesyl pyrophosphate synthase-like isoform X1 [KO:K00787] [EC:2.5.1.1 2.5.1.10]
116181637  farnesyl pyrophosphate synthase-like [KO:K00787] [EC:2.5.1.1 2.5.1.10]
116181971  farnesyl pyrophosphate synthase-like [KO:K00787] [EC:2.5.1.1 2.5.1.10]
116181972  farnesyl pyrophosphate synthase 2-like [KO:K00787] [EC:2.5.1.1 2.5.1.10]
116181974  farnesyl pyrophosphate synthase-like [KO:K00787] [EC:2.5.1.1 2.5.1.10]
116181981  farnesyl pyrophosphate synthase-like [KO:K00787] [EC:2.5.1.1 2.5.1.10]
116181983  farnesyl pyrophosphate synthase-like [KO:K00787] [EC:2.5.1.1 2.5.1.10]
116181984  farnesyl pyrophosphate synthase-like [KO:K00787] [EC:2.5.1.1 2.5.1.10]
116162897  farnesyl pyrophosphate synthase-like [KO:K00787] [EC:2.5.1.1 2.5.1.10]
116172935  farnesyl pyrophosphate synthase-like isoform X1 [KO:K00787] [EC:2.5.1.1 2.5.1.10]
116173760  farnesyl pyrophosphate synthase 1-like [KO:K00787] [EC:2.5.1.1 2.5.1.10]
116173761  farnesyl pyrophosphate synthase 2-like [KO:K00787] [EC:2.5.1.1 2.5.1.10]
116173762  farnesyl pyrophosphate synthase-like isoform X1 [KO:K00787] [EC:2.5.1.1 2.5.1.10]
116173763  farnesyl pyrophosphate synthase-like isoform X1 [KO:K00787] [EC:2.5.1.1 2.5.1.10]
116173765  farnesyl pyrophosphate synthase-like isoform X1 [KO:K00787] [EC:2.5.1.1 2.5.1.10]
116165173  farnesyl pyrophosphate synthase-like [KO:K00787] [EC:2.5.1.1 2.5.1.10]
116174916  farnesyl pyrophosphate synthase-like isoform X1 [KO:K00787] [EC:2.5.1.1 2.5.1.10]
116175021  farnesyl pyrophosphate synthase-like [KO:K00787] [EC:2.5.1.1 2.5.1.10]
116175085  farnesyl pyrophosphate synthase-like [KO:K00787] [EC:2.5.1.1 2.5.1.10]
116175127  farnesyl pyrophosphate synthase-like [KO:K00787] [EC:2.5.1.1 2.5.1.10]
116175203  farnesyl diphosphate synthase 2-like isoform X1 [KO:K00787] [EC:2.5.1.1 2.5.1.10]
116181761  geranylgeranyl pyrophosphate synthase-like isoform X1 [KO:K00804] [EC:2.5.1.1 2.5.1.10 2.5.1.29]
116165536  geranylgeranyl pyrophosphate synthase-like isoform X1 [KO:K00804] [EC:2.5.1.1 2.5.1.10 2.5.1.29]
116165398  decaprenyl-diphosphate synthase subunit 1 isoform X1 [KO:K12504] [EC:2.5.1.91]
116170874  decaprenyl-diphosphate synthase subunit 2-like [KO:K12505] [EC:2.5.1.91]
116170875  decaprenyl-diphosphate synthase subunit 2-like [KO:K12505] [EC:2.5.1.91]
116170976  decaprenyl-diphosphate synthase subunit 2-like [KO:K12505] [EC:2.5.1.91]
116170977  decaprenyl-diphosphate synthase subunit 2-like [KO:K12505] [EC:2.5.1.91]
116178393  dehydrodolichyl diphosphate synthase complex subunit DHDDS-like [KO:K11778] [EC:2.5.1.87]
116162638  dehydrodolichyl diphosphate synthase complex subunit nus1 [KO:K19177] [EC:2.5.1.87]
116164659  protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha [KO:K05955] [EC:2.5.1.58 2.5.1.59]
116171473  protein farnesyltransferase subunit beta [KO:K05954] [EC:2.5.1.58]
116174462  CAAX prenyl protease 2 [KO:K08658] [EC:3.4.26.1]
116181831  CAAX prenyl protease 1 homolog [KO:K06013] [EC:3.4.24.84]
116163728  CAAX prenyl protease 1 homolog [KO:K06013] [EC:3.4.24.84]
116170419  protein-S-isoprenylcysteine O-methyltransferase [KO:K00587] [EC:2.1.1.100]
116167605  farnesol dehydrogenase-like [KO:K15890] [EC:1.1.1.216]
116168606  farnesol dehydrogenase-like [KO:K15890] [EC:1.1.1.216]
116178160  farnesol dehydrogenase-like [KO:K15890] [EC:1.1.1.216]
116178487  farnesol dehydrogenase-like [KO:K15890] [EC:1.1.1.216]
116178536  farnesol dehydrogenase-like [KO:K15890] [EC:1.1.1.216]
116178537  farnesol dehydrogenase-like [KO:K15890] [EC:1.1.1.216]
116178618  farnesol dehydrogenase-like [KO:K15890] [EC:1.1.1.216]
116178651  farnesol dehydrogenase-like [KO:K15890] [EC:1.1.1.216]
116169221  farnesol dehydrogenase-like [KO:K15890] [EC:1.1.1.216]
116178845  farnesol dehydrogenase-like [KO:K15890] [EC:1.1.1.216]
116179050  farnesol dehydrogenase-like [KO:K15890] [EC:1.1.1.216]
116179119  farnesol dehydrogenase-like [KO:K15890] [EC:1.1.1.216]
116179187  farnesol dehydrogenase-like [KO:K15890] [EC:1.1.1.216]
116159701  farnesol dehydrogenase-like [KO:K15890] [EC:1.1.1.216]
116169955  farnesol dehydrogenase-like [KO:K15890] [EC:1.1.1.216]
116179311  farnesol dehydrogenase-like [KO:K15890] [EC:1.1.1.216]
116179362  farnesol dehydrogenase-like [KO:K15890] [EC:1.1.1.216]
116179566  dehydrogenase/reductase SDR family member 11-like [KO:K15890] [EC:1.1.1.216]
116179717  farnesol dehydrogenase-like isoform X1 [KO:K15890] [EC:1.1.1.216]
116160923  farnesol dehydrogenase-like [KO:K15890] [EC:1.1.1.216]
116161389  farnesol dehydrogenase-like [KO:K15890] [EC:1.1.1.216]
116171171  farnesol dehydrogenase-like [KO:K15890] [EC:1.1.1.216]
116171172  farnesol dehydrogenase-like [KO:K15890] [EC:1.1.1.216]
116171173  farnesol dehydrogenase-like [KO:K15890] [EC:1.1.1.216]
116171174  farnesol dehydrogenase-like [KO:K15890] [EC:1.1.1.216]
116171175  farnesol dehydrogenase-like [KO:K15890] [EC:1.1.1.216]
116171343  farnesol dehydrogenase-like [KO:K15890] [EC:1.1.1.216]
116171372  farnesol dehydrogenase-like [KO:K15890] [EC:1.1.1.216]
116171457  farnesol dehydrogenase-like [KO:K15890] [EC:1.1.1.216]
116161464  farnesol dehydrogenase-like [KO:K15890] [EC:1.1.1.216]
116171742  farnesol dehydrogenase-like [KO:K15890] [EC:1.1.1.216]
116162028  farnesol dehydrogenase-like [KO:K15890] [EC:1.1.1.216]
116162558  farnesol dehydrogenase-like [KO:K15890] [EC:1.1.1.216]
116162559  farnesol dehydrogenase-like [KO:K15890] [EC:1.1.1.216]
116162560  farnesol dehydrogenase-like [KO:K15890] [EC:1.1.1.216]
116162561  farnesol dehydrogenase-like [KO:K15890] [EC:1.1.1.216]
116172717  farnesol dehydrogenase-like [KO:K15890] [EC:1.1.1.216]
116172764  farnesol dehydrogenase-like [KO:K15890] [EC:1.1.1.216]
116163329  farnesol dehydrogenase-like [KO:K15890] [EC:1.1.1.216]
116163330  farnesol dehydrogenase-like [KO:K15890] [EC:1.1.1.216]
116164197  farnesol dehydrogenase-like [KO:K15890] [EC:1.1.1.216]
116173919  farnesol dehydrogenase-like [KO:K15890] [EC:1.1.1.216]
116164848  farnesol dehydrogenase-like [KO:K15890] [EC:1.1.1.216]
116165177  farnesol dehydrogenase-like [KO:K15890] [EC:1.1.1.216]
116167193  farnesol dehydrogenase-like [KO:K15890] [EC:1.1.1.216]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00118  D-Glyceraldehyde 3-phosphate
C00129  Isopentenyl diphosphate
C00235  Dimethylallyl diphosphate
C00332  Acetoacetyl-CoA
C00341  Geranyl diphosphate
C00353  Geranylgeranyl diphosphate
C00356  (S)-3-Hydroxy-3-methylglutaryl-CoA
C00418  (R)-Mevalonate
C00448  trans,trans-Farnesyl diphosphate
C01107  (R)-5-Phosphomevalonate
C01126  (2E,6E)-Farnesol
C01143  (R)-5-Diphosphomevalonate
C01230  all-trans-Hexaprenyl diphosphate
C02321  cis-1,4-Polyisoprene
C03461  2-trans,6-trans-Farnesal
C04145  all-trans-Nonaprenyl diphosphate
C04146  all-trans-Octaprenyl diphosphate
C04216  all-trans-Heptaprenyl diphosphate
C04506  Protein C-terminal S-farnesyl-L-cysteine
C04574  di-trans,poly-cis-Undecaprenyl diphosphate
C04748  Protein C-terminal S-farnesyl-L-cysteine methyl ester
C05427  Phytyl diphosphate
C05859  ditrans,polycis-Polyprenyl diphosphate
C06081  Polyprenol
C11434  2-C-Methyl-D-erythritol 4-phosphate
C11435  4-(Cytidine 5'-diphospho)-2-C-methyl-D-erythritol
C11436  2-Phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol
C11437  1-Deoxy-D-xylulose 5-phosphate
C11453  2-C-Methyl-D-erythritol 2,4-cyclodiphosphate
C11811  1-Hydroxy-2-methyl-2-butenyl 4-diphosphate
C16521  Isoprene
C16826  2-cis,6-trans-Farnesyl diphosphate
C17432  all-trans-Decaprenyl diphosphate
C18321  trans,octacis-Decaprenyl diphosphate
C19691  Farnesylcysteine
C19760  2-cis,6-cis-Farnesyl diphosphate
C19852  tritrans,heptacis-Undecaprenyl diphosphate
C19853  trans,polycis-Polyprenyl diphosphate
C20120  S-Farnesyl protein
C20121  trans,trans-Farnesyl phosphate
C20345  Isopentenyl phosphate
C20847  (R)-Mevalonate 3-phosphate
C20848  (R)-Mevalonate 3,5-bisphosphate
C22453  trans-Anhydromevalonate 5-phosphate
Reference
  Authors
Lange BM, Ghassemian M.
  Title
Genome organization in Arabidopsis thaliana: a survey for genes involved in isoprenoid and chlorophyll metabolism.
  Journal
Plant Mol Biol 51:925-48 (2003)
DOI:10.1023/A:1023005504702
Reference
  Authors
Saiki R, Nagata A, Kainou T, Matsuda H, Kawamukai M
  Title
Characterization of solanesyl and decaprenyl diphosphate synthases in mice and humans.
  Journal
FEBS J 272:5606-22 (2005)
DOI:10.1111/j.1742-4658.2005.04956.x
Reference
PMID:9858571
  Authors
Sato M, Sato K, Nishikawa S, Hirata A, Kato J, Nakano A
  Title
The yeast RER2 gene, identified by endoplasmic reticulum protein localization mutations, encodes cis-prenyltransferase, a key enzyme in dolichol synthesis.
  Journal
Mol Cell Biol 19:471-83 (1999)
DOI:10.1128/MCB.19.1.471
Reference
  Authors
Vannice JC, Skaff DA, Keightley A, Addo JK, Wyckoff GJ, Miziorko HM
  Title
Identification in Haloferax volcanii of phosphomevalonate decarboxylase and isopentenyl phosphate kinase as catalysts of the terminal enzyme reactions in an  archaeal alternate mevalonate pathway.
  Journal
J Bacteriol 196:1055-63 (2014)
DOI:10.1128/JB.01230-13
Related
pathway
ppyr00010  Glycolysis / Gluconeogenesis
ppyr00100  Steroid biosynthesis
ppyr00130  Ubiquinone and other terpenoid-quinone biosynthesis
ppyr00270  Cysteine and methionine metabolism
ppyr00510  N-Glycan biosynthesis
KO pathway
ko00900   
LinkDB

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