KEGG   PATHWAY: praf00010
Entry
praf00010                   Pathway                                
Name
Glycolysis / Gluconeogenesis - Podarcis raffonei (Aeolian wall lizard)
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
praf00010  Glycolysis / Gluconeogenesis
praf00010

Module
praf_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:praf00010]
praf_M00002  Glycolysis, core module involving three-carbon compounds [PATH:praf00010]
praf_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:praf00010]
praf_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:praf00010]
Other DBs
GO: 0006096 0006094
Organism
Podarcis raffonei (Aeolian wall lizard) [GN:praf]
Gene
128408053  HK3; hexokinase-3 [KO:K00844] [EC:2.7.1.1]
128413922  HK1; hexokinase-1 isoform X1 [KO:K00844] [EC:2.7.1.1]
128413925  hexokinase HKDC1 [KO:K00844] [EC:2.7.1.1]
128420069  HK2; hexokinase-2 isoform X1 [KO:K00844] [EC:2.7.1.1]
128403174  GCK; hexokinase-4 isoform X1 [KO:K12407] [EC:2.7.1.2]
128419051  GPI; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
128423895  PFKP; ATP-dependent 6-phosphofructokinase, platelet type isoform X1 [KO:K00850] [EC:2.7.1.11]
128414467  PFKL; ATP-dependent 6-phosphofructokinase, liver type isoform X1 [KO:K00850] [EC:2.7.1.11]
128405974  PFKM; ATP-dependent 6-phosphofructokinase, muscle type [KO:K00850] [EC:2.7.1.11]
128423315  fructose-1,6-bisphosphatase 1-like [KO:K03841] [EC:3.1.3.11]
128423414  fructose-1,6-bisphosphatase isozyme 2 [KO:K03841] [EC:3.1.3.11]
128400891  ALDOA; fructose-bisphosphate aldolase A [KO:K01623] [EC:4.1.2.13]
128402347  ALDOC; fructose-bisphosphate aldolase C [KO:K01623] [EC:4.1.2.13]
128405223  ALDOB; fructose-bisphosphate aldolase B [KO:K01623] [EC:4.1.2.13]
128405266  TPI1; triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
128404614  GAPDH; glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
128418527  GAPDHS; glyceraldehyde-3-phosphate dehydrogenase, testis-specific isoform X1 [KO:K10705] [EC:1.2.1.12]
128406771  PGK1; phosphoglycerate kinase 1 [KO:K00927] [EC:2.7.2.3]
128402892  PGAM2; phosphoglycerate mutase 2 [KO:K01834] [EC:5.4.2.11]
128414345  PGAM1; phosphoglycerate mutase 1 [KO:K01834] [EC:5.4.2.11]
128419766  ENO1; alpha-enolase isoform X1 [KO:K01689] [EC:4.2.1.11]
128399964  ENO3; beta-enolase [KO:K01689] [EC:4.2.1.11]
128405258  ENO2; gamma-enolase isoform X1 [KO:K01689] [EC:4.2.1.11]
128414199  ENO4; enolase 4 isoform X1 [KO:K27394] [EC:4.2.1.11]
128401370  PKM; pyruvate kinase PKM isoform X1 [KO:K00873] [EC:2.7.1.40]
128403782  PKLR; pyruvate kinase PKLR isoform X1 [KO:K12406] [EC:2.7.1.40]
128413167  PDHA1; pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial isoform X1 [KO:K00161] [EC:1.2.4.1]
128408520  PDHB; pyruvate dehydrogenase E1 component subunit beta, mitochondrial [KO:K00162] [EC:1.2.4.1]
128402845  DLAT; dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial [KO:K00627] [EC:2.3.1.12]
128422301  DLD; dihydrolipoyl dehydrogenase, mitochondrial [KO:K00382] [EC:1.8.1.4]
128416097  L-lactate dehydrogenase A chain [KO:K00016] [EC:1.1.1.27]
128421895  LDHB; L-lactate dehydrogenase B chain [KO:K00016] [EC:1.1.1.27]
128421329  alcohol dehydrogenase 1-like isoform X1 [KO:K13951] [EC:1.1.1.1]
128421331  alcohol dehydrogenase 1-like isoform X1 [KO:K13951] [EC:1.1.1.1]
128421332  alcohol dehydrogenase 1-like isoform X1 [KO:K13951] [EC:1.1.1.1]
128421333  alcohol dehydrogenase 1B isoform X1 [KO:K13951] [EC:1.1.1.1]
128421334  alcohol dehydrogenase 1A [KO:K13951] [EC:1.1.1.1]
128421335  alcohol dehydrogenase 1B-like [KO:K13951] [EC:1.1.1.1]
128421340  all-trans-retinol dehydrogenase [NAD(+)] ADH4-like [KO:K13980] [EC:1.1.1.1]
128421339  alcohol dehydrogenase class-3 [KO:K00121] [EC:1.1.1.284 1.1.1.1]
128415873  AKR1A1; aldo-keto reductase family 1 member A1 [KO:K00002] [EC:1.1.1.2]
128400993  ALDH16A1; aldehyde dehydrogenase family 16 member A1 isoform X1 [KO:K00128] [EC:1.2.1.3]
128403188  aldehyde dehydrogenase family 3 member A2-like isoform X1 [KO:K00128] [EC:1.2.1.3]
128419926  ALDH2; aldehyde dehydrogenase, mitochondrial [KO:K00128] [EC:1.2.1.3]
128423011  ALDH7A1; alpha-aminoadipic semialdehyde dehydrogenase [KO:K14085] [EC:1.2.1.31 1.2.1.8 1.2.1.3]
128415159  ALDH9A1; 4-trimethylaminobutyraldehyde dehydrogenase isoform X1 [KO:K00149] [EC:1.2.1.47 1.2.1.3]
128419428  aldehyde dehydrogenase family 3 member B1-like isoform X1 [KO:K00129] [EC:1.2.1.5]
128409174  acetyl-coenzyme A synthetase 2-like, mitochondrial [KO:K01895] [EC:6.2.1.1]
128416305  ACSS2; acetyl-coenzyme A synthetase, cytoplasmic isoform X1 [KO:K01895] [EC:6.2.1.1]
128411325  ACSS1; acetyl-coenzyme A synthetase 2-like, mitochondrial isoform X1 [KO:K01895] [EC:6.2.1.1]
128411301  GALM; galactose mutarotase [KO:K01785] [EC:5.1.3.3]
128415661  PGM1; phosphoglucomutase-1 [KO:K01835] [EC:5.4.2.2]
128421362  PGM2; phosphopentomutase [KO:K15779] [EC:5.4.2.2 5.4.2.7]
128423590  G6PC2; glucose-6-phosphatase 2 [KO:K01084] [EC:3.1.3.9]
128399881  G6PC3; glucose-6-phosphatase 3 [KO:K01084] [EC:3.1.3.9]
128400007  glucose-6-phosphatase catalytic subunit 1-like [KO:K01084] [EC:3.1.3.9]
128400009  glucose-6-phosphatase catalytic subunit 1-like [KO:K01084] [EC:3.1.3.9]
128401809  ADPGK; ADP-dependent glucokinase isoform X1 [KO:K08074] [EC:2.7.1.147]
128422059  BPGM; bisphosphoglycerate mutase [KO:K01837] [EC:5.4.2.4 5.4.2.11]
128413994  MINPP1; multiple inositol polyphosphate phosphatase 1 isoform X1 [KO:K03103] [EC:3.1.3.62 3.1.3.80]
128416499  PCK1; phosphoenolpyruvate carboxykinase, cytosolic [GTP] [KO:K01596] [EC:4.1.1.32]
128400540  PCK2; phosphoenolpyruvate carboxykinase [GTP], mitochondrial [KO:K01596] [EC:4.1.1.32]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
praf00020  Citrate cycle (TCA cycle)
praf00030  Pentose phosphate pathway
praf00500  Starch and sucrose metabolism
praf00620  Pyruvate metabolism
praf00640  Propanoate metabolism
KO pathway
ko00010   
LinkDB

DBGET integrated database retrieval system