KEGG   PATHWAY: psaa00470
Entry
psaa00470                   Pathway                                
Name
D-Amino acid metabolism - Paraburkholderia sabiae
Class
Metabolism; Metabolism of other amino acids
Pathway map
psaa00470  D-Amino acid metabolism
psaa00470

Module
psaa_M00948  Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate [PATH:psaa00470]
Other DBs
GO: 0046416
Organism
Paraburkholderia sabiae [GN:psaa]
Gene
QEN71_06315  alr; alanine racemase [KO:K01775] [EC:5.1.1.1]
QEN71_27380  D-alanine--D-alanine ligase [KO:K01921] [EC:6.3.2.4]
QEN71_37210  glutaminase [KO:K01425] [EC:3.5.1.2]
QEN71_23785  murI; glutamate racemase [KO:K01776] [EC:5.1.1.3]
QEN71_27400  murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [KO:K01925] [EC:6.3.2.9]
QEN71_33810  amino acid racemase [KO:K01779] [EC:5.1.1.13]
QEN71_35505  amino acid racemase [KO:K01779] [EC:5.1.1.13]
QEN71_10540  amino acid racemase [KO:K01779] [EC:5.1.1.13]
QEN71_01950  amino acid deaminase [KO:K01753] [EC:4.3.1.18]
QEN71_41265  dsdA; D-serine ammonia-lyase [KO:K01753] [EC:4.3.1.18]
QEN71_00365  dapF; diaminopimelate epimerase [KO:K01778] [EC:5.1.1.7]
QEN71_28075  lysA; diaminopimelate decarboxylase [KO:K01586] [EC:4.1.1.20]
QEN71_12465  ornithine cyclodeaminase family protein [KO:K19744] [EC:1.4.1.25]
QEN71_34285  proline racemase family protein [KO:K01777] [EC:5.1.1.4]
QEN71_36370  proline racemase family protein [KO:K01777] [EC:5.1.1.4]
QEN71_36490  proline racemase family protein [KO:K01777] [EC:5.1.1.4]
QEN71_07995  proline racemase family protein [KO:K01777] [EC:5.1.1.4]
QEN71_20260  4-hydroxyproline epimerase [KO:K12658] [EC:5.1.1.8]
QEN71_34275  4-hydroxyproline epimerase [KO:K12658] [EC:5.1.1.8]
QEN71_20275  FAD-dependent oxidoreductase [KO:K22549] [EC:1.5.99.-]
QEN71_20265  FAD-dependent oxidoreductase [KO:K21061] [EC:1.5.99.-]
QEN71_20270  (2Fe-2S)-binding protein [KO:K22550]
QEN71_20255  dihydrodipicolinate synthase family protein [KO:K21062] [EC:3.5.4.22]
QEN71_31030  aldehyde dehydrogenase (NADP(+)) [KO:K13877] [EC:1.2.1.26]
QEN71_31365  aldehyde dehydrogenase (NADP(+)) [KO:K13877] [EC:1.2.1.26]
QEN71_32510  aldehyde dehydrogenase (NADP(+)) [KO:K13877] [EC:1.2.1.26]
QEN71_13720  aldehyde dehydrogenase (NADP(+)) [KO:K13877] [EC:1.2.1.26]
QEN71_18010  aldehyde dehydrogenase (NADP(+)) [KO:K13877] [EC:1.2.1.26]
QEN71_20485  D-amino acid dehydrogenase [KO:K00285] [EC:1.4.5.1]
QEN71_04190  D-amino acid dehydrogenase [KO:K00285] [EC:1.4.5.1]
Compound
C00022  Pyruvate
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00036  Oxaloacetate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00077  L-Ornithine
C00079  L-Phenylalanine
C00084  Acetaldehyde
C00097  L-Cysteine
C00133  D-Alanine
C00134  Putrescine
C00135  L-Histidine
C00148  L-Proline
C00166  Phenylpyruvate
C00188  L-Threonine
C00217  D-Glutamate
C00402  D-Aspartate
C00431  5-Aminopentanoate
C00433  2,5-Dioxopentanoate
C00515  D-Ornithine
C00624  N-Acetyl-L-glutamate
C00666  LL-2,6-Diaminoheptanedioate
C00680  meso-2,6-Diaminoheptanedioate
C00692  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
C00739  D-Lysine
C00740  D-Serine
C00763  D-Proline
C00792  D-Arginine
C00793  D-Cysteine
C00819  D-Glutamine
C00820  D-Threonine
C00855  D-Methionine
C00993  D-Alanyl-D-alanine
C01110  5-Amino-2-oxopentanoic acid
C01157  Hydroxyproline
C01180  4-Methylthio-2-oxobutanoic acid
C01667  Bacitracin
C01672  Cadaverine
C01726  D-Lombricine
C02237  5-Oxo-D-proline
C02265  D-Phenylalanine
C02855  N-Phospho-D-lombricine
C03239  6-Amino-2-oxohexanoate
C03341  2-Amino-4-oxopentanoic acid
C03440  cis-4-Hydroxy-D-proline
C03564  1-Pyrroline-2-carboxylate
C03771  5-Guanidino-2-oxopentanoate
C03933  5-D-Glutamyl-D-glutamyl-peptide
C03943  (2R,4S)-2,4-Diaminopentanoate
C04260  O-D-Alanyl-poly(ribitol phosphate)
C04282  1-Pyrroline-4-hydroxy-2-carboxylate
C04457  D-Alanyl-alanyl-poly(glycerolphosphate)
C05161  (2R,5S)-2,5-Diaminohexanoate
C05620  N-Acetyl-D-phenylalanine
C05825  2-Amino-5-oxohexanoate
C05939  Linatine
C05941  2-Oxo-4-hydroxy-5-aminovalerate
C05942  Pyrrole-2-carboxylate
C06419  D-Histidine
C22024  Staphylopine
C22025  (2S)-2-Amino-4-{[(1R)-1-carboxy-2-(1H-imidazol-4-yl)ethyl]amino}butanoate
C22611  N-Acetyl-D-glutamate
Reference
PMID:33788945
  Authors
Miyamoto T, Homma H
  Title
D-Amino acid metabolism in bacteria.
  Journal
J Biochem 170:5-13 (2021)
DOI:10.1093/jb/mvab043
Reference
PMID:27230378
  Authors
Ghssein G, Brutesco C, Ouerdane L, Fojcik C, Izaute A, Wang S, Hajjar C, Lobinski R, Lemaire D, Richaud P, Voulhoux R, Espaillat A, Cava F, Pignol D, Borezee-Durant E, Arnoux P
  Title
Biosynthesis of a broad-spectrum nicotianamine-like metallophore in Staphylococcus aureus.
  Journal
Science 352:1105-9 (2016)
DOI:10.1126/science.aaf1018
Related
pathway
psaa00010  Glycolysis / Gluconeogenesis
psaa00020  Citrate cycle (TCA cycle)
psaa00250  Alanine, aspartate and glutamate metabolism
psaa00260  Glycine, serine and threonine metabolism
psaa00270  Cysteine and methionine metabolism
psaa00300  Lysine biosynthesis
psaa00310  Lysine degradation
psaa00330  Arginine and proline metabolism
psaa00340  Histidine metabolism
psaa00360  Phenylalanine metabolism
psaa00550  Peptidoglycan biosynthesis
psaa00620  Pyruvate metabolism
KO pathway
ko00470   
LinkDB

DBGET integrated database retrieval system