KEGG   PATHWAY: psiu00010
Entry
psiu00010                   Pathway                                
Name
Glycolysis / Gluconeogenesis - Phocoena sinus (vaquita)
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
psiu00010  Glycolysis / Gluconeogenesis
psiu00010

Module
psiu_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:psiu00010]
psiu_M00002  Glycolysis, core module involving three-carbon compounds [PATH:psiu00010]
psiu_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:psiu00010]
psiu_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:psiu00010]
Other DBs
GO: 0006096 0006094
Organism
Phocoena sinus (vaquita) [GN:psiu]
Gene
116764077  HK2; hexokinase-2 [KO:K00844] [EC:2.7.1.1]
116750935  HK3; hexokinase-3 isoform X1 [KO:K00844] [EC:2.7.1.1]
116741742  HK1; hexokinase-1 isoform X1 [KO:K00844] [EC:2.7.1.1]
116741744  HKDC1; hexokinase HKDC1 [KO:K00844] [EC:2.7.1.1]
116759611  GCK; hexokinase-4 isoform X1 [KO:K12407] [EC:2.7.1.2]
116743446  GPI; glucose-6-phosphate isomerase isoform X1 [KO:K01810] [EC:5.3.1.9]
116753372  PFKL; ATP-dependent 6-phosphofructokinase, liver type isoform X1 [KO:K00850] [EC:2.7.1.11]
116760160  PFKM; ATP-dependent 6-phosphofructokinase, muscle type isoform X1 [KO:K00850] [EC:2.7.1.11]
116747794  PFKP; ATP-dependent 6-phosphofructokinase, platelet type isoform X1 [KO:K00850] [EC:2.7.1.11]
116755412  FBP1; fructose-1,6-bisphosphatase 1 [KO:K03841] [EC:3.1.3.11]
116755592  FBP2; fructose-1,6-bisphosphatase isozyme 2 [KO:K03841] [EC:3.1.3.11]
116746392  ALDOC; fructose-bisphosphate aldolase C [KO:K01623] [EC:4.1.2.13]
116756020  ALDOB; fructose-bisphosphate aldolase B [KO:K01623] [EC:4.1.2.13]
116740702  ALDOA; fructose-bisphosphate aldolase A isoform X1 [KO:K01623] [EC:4.1.2.13]
116760892  TPI1; triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
116760794  GAPDH; glyceraldehyde-3-phosphate dehydrogenase isoform X1 [KO:K00134] [EC:1.2.1.12]
116739637  LOW QUALITY PROTEIN: glyceraldehyde-3-phosphate dehydrogenase-like [KO:K00134] [EC:1.2.1.12]
116744718  GAPDHS; glyceraldehyde-3-phosphate dehydrogenase, testis-specific [KO:K10705] [EC:1.2.1.12]
116744184  LOW QUALITY PROTEIN: phosphoglycerate kinase 1-like [KO:K00927] [EC:2.7.2.3]
116747714  PGK1; phosphoglycerate kinase 1 [KO:K00927] [EC:2.7.2.3]
116741512  PGAM1; phosphoglycerate mutase 1 [KO:K01834] [EC:5.4.2.11]
116759338  PGAM2; phosphoglycerate mutase 2 isoform X1 [KO:K01834] [EC:5.4.2.11]
116761266  ENO2; gamma-enolase isoform X1 [KO:K01689] [EC:4.2.1.11]
116755822  ENO1; alpha-enolase isoform X1 [KO:K01689] [EC:4.2.1.11]
116745464  ENO3; beta-enolase [KO:K01689] [EC:4.2.1.11]
116742051  ENO4; enolase 4 isoform X1 [KO:K27394] [EC:4.2.1.11]
116748496  PKM; pyruvate kinase PKM isoform X1 [KO:K00873] [EC:2.7.1.40]
116754609  PKLR; pyruvate kinase PKLR [KO:K12406] [EC:2.7.1.40]
116747360  PDHA1; pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial isoform X1 [KO:K00161] [EC:1.2.4.1]
116754568  PDHA2; LOW QUALITY PROTEIN: pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial [KO:K00161] [EC:1.2.4.1]
116761587  PDHB; LOW QUALITY PROTEIN: pyruvate dehydrogenase E1 component subunit beta, mitochondrial [KO:K00162] [EC:1.2.4.1]
116757504  DLAT; dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial isoform X1 [KO:K00627] [EC:2.3.1.12]
116756816  LOW QUALITY PROTEIN: dihydrolipoyl dehydrogenase, mitochondrial-like [KO:K00382] [EC:1.8.1.4]
116758249  LOW QUALITY PROTEIN: dihydrolipoyl dehydrogenase, mitochondrial-like [KO:K00382] [EC:1.8.1.4]
116759602  DLD; dihydrolipoyl dehydrogenase, mitochondrial isoform X1 [KO:K00382] [EC:1.8.1.4]
116743828  LOW QUALITY PROTEIN: L-lactate dehydrogenase A chain-like [KO:K00016] [EC:1.1.1.27]
116760853  LDHB; L-lactate dehydrogenase B chain [KO:K00016] [EC:1.1.1.27]
116763652  LOW QUALITY PROTEIN: L-lactate dehydrogenase A-like 6B [KO:K00016] [EC:1.1.1.27]
116758350  LOW QUALITY PROTEIN: L-lactate dehydrogenase C chain-like [KO:K00016] [EC:1.1.1.27]
116758623  LDHA; L-lactate dehydrogenase A chain isoform X1 [KO:K00016] [EC:1.1.1.27]
116754009  LOW QUALITY PROTEIN: all-trans-retinol dehydrogenase [NAD(+)] ADH7-like [KO:K13951] [EC:1.1.1.1]
116754130  ADH1C; alcohol dehydrogenase 1C [KO:K13951] [EC:1.1.1.1]
116754011  ADH4; LOW QUALITY PROTEIN: all-trans-retinol dehydrogenase [NAD(+)] ADH4 [KO:K13980] [EC:1.1.1.1]
116754131  ADH5; alcohol dehydrogenase class-3 isoform X1 [KO:K00121] [EC:1.1.1.284 1.1.1.1]
116759242  alcohol dehydrogenase class-3-like [KO:K00121] [EC:1.1.1.284 1.1.1.1]
116741154  AKR1A1; aldo-keto reductase family 1 member A1 [KO:K00002] [EC:1.1.1.2]
116739066  ALDH2; aldehyde dehydrogenase, mitochondrial [KO:K00128] [EC:1.2.1.3]
116755633  ALDH1B1; LOW QUALITY PROTEIN: aldehyde dehydrogenase X, mitochondrial [KO:K00128] [EC:1.2.1.3]
116745040  ALDH3A2; aldehyde dehydrogenase family 3 member A2 [KO:K00128] [EC:1.2.1.3]
116750599  ALDH7A1; alpha-aminoadipic semialdehyde dehydrogenase isoform X1 [KO:K14085] [EC:1.2.1.31 1.2.1.8 1.2.1.3]
116754267  ALDH9A1; 4-trimethylaminobutyraldehyde dehydrogenase [KO:K00149] [EC:1.2.1.47 1.2.1.3]
116746452  ALDH3A1; aldehyde dehydrogenase, dimeric NADP-preferring [KO:K00129] [EC:1.2.1.5]
116757350  LOW QUALITY PROTEIN: aldehyde dehydrogenase family 3 member B1-like [KO:K00129] [EC:1.2.1.5]
116758046  ALDH3B1; aldehyde dehydrogenase family 3 member B1 isoform X1 [KO:K00129] [EC:1.2.1.5]
116740955  ACSS2; acetyl-coenzyme A synthetase, cytoplasmic isoform X1 [KO:K01895] [EC:6.2.1.1]
116740985  ACSS1; acetyl-coenzyme A synthetase 2-like, mitochondrial isoform X1 [KO:K01895] [EC:6.2.1.1]
116764676  GALM; aldose 1-epimerase isoform X1 [KO:K01785] [EC:5.1.3.3]
116762233  PGM1; phosphoglucomutase-1 isoform X1 [KO:K01835] [EC:5.4.2.2]
116754152  PGM2; phosphoglucomutase-2 isoform X1 [KO:K15779] [EC:5.4.2.2 5.4.2.7]
116746427  G6PC3; glucose-6-phosphatase 3 isoform X1 [KO:K01084] [EC:3.1.3.9]
116739361  glucose-6-phosphatase 3 [KO:K01084] [EC:3.1.3.9]
116756289  G6PC2; glucose-6-phosphatase 2 [KO:K01084] [EC:3.1.3.9]
116745075  G6PC; glucose-6-phosphatase isoform X1 [KO:K01084] [EC:3.1.3.9]
116749606  ADPGK; ADP-dependent glucokinase isoform X1 [KO:K08074] [EC:2.7.1.147]
116764955  bisphosphoglycerate mutase-like [KO:K01837] [EC:5.4.2.4 5.4.2.11]
116759523  BPGM; bisphosphoglycerate mutase [KO:K01837] [EC:5.4.2.4 5.4.2.11]
116741817  MINPP1; multiple inositol polyphosphate phosphatase 1 isoform X1 [KO:K03103] [EC:3.1.3.62 3.1.3.80]
116749461  PCK2; phosphoenolpyruvate carboxykinase [GTP], mitochondrial isoform X1 [KO:K01596] [EC:4.1.1.32]
116740888  PCK1; phosphoenolpyruvate carboxykinase, cytosolic [GTP] [KO:K01596] [EC:4.1.1.32]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
psiu00020  Citrate cycle (TCA cycle)
psiu00030  Pentose phosphate pathway
psiu00500  Starch and sucrose metabolism
psiu00620  Pyruvate metabolism
psiu00640  Propanoate metabolism
KO pathway
ko00010   
LinkDB

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