KEGG   PATHWAY: ptp00230
Entry
ptp00230                    Pathway                                
Name
Purine metabolism - Planktomarina temperata
Class
Metabolism; Nucleotide metabolism
Pathway map
ptp00230  Purine metabolism
ptp00230

Module
ptp_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:ptp00230]
ptp_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:ptp00230]
ptp_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:ptp00230]
ptp_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:ptp00230]
ptp_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:ptp00230]
ptp_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:ptp00230]
Other DBs
GO: 0006163 0042278
Organism
Planktomarina temperata [GN:ptp]
Gene
RCA23_c10850  nudF; ADP-ribose pyrophosphatase NudF [KO:K01515] [EC:3.6.1.13 3.6.1.-]
RCA23_c02060  deoB; phosphopentomutase DeoB [KO:K01839] [EC:5.4.2.7]
RCA23_c07320  pgm; phosphoglucomutase Pgm [KO:K01835] [EC:5.4.2.2]
RCA23_c20890  prs; ribose-phosphate pyrophosphokinase Prs [KO:K00948] [EC:2.7.6.1]
RCA23_c13890  purF; amidophosphoribosyltransferase PurF [KO:K00764] [EC:2.4.2.14]
RCA23_c27560  purD; phosphoribosylamine--glycine ligase PurD [KO:K01945] [EC:6.3.4.13]
RCA23_c13220  purN; phosphoribosylglycinamide formyltransferase PurN [KO:K11175] [EC:2.1.2.2]
RCA23_c14770  purL; phosphoribosylformylglycinamidine synthase PurL [KO:K23269] [EC:6.3.5.3]
RCA23_c13290  purS; phosphoribosylformylglycinamidine (FGAM) synthase PurS [KO:K23264] [EC:6.3.5.3]
RCA23_c13300  purQ; phosphoribosylformylglycinamidine synthase PurQ [KO:K23265] [EC:6.3.5.3 3.5.1.2]
RCA23_c13210  purM; phosphoribosylformylglycinamidine cyclo-ligase PurM [KO:K01933] [EC:6.3.3.1]
RCA23_c20720  purK; N5-carboxyaminoimidazole ribonucleotide synthase PurK [KO:K01589] [EC:6.3.4.18]
RCA23_c20710  purE; N5-carboxyaminoimidazole ribonucleotide mutase PurE [KO:K01588] [EC:5.4.99.18]
RCA23_c13280  purC; phosphoribosylaminoimidazole-succinocarboxamide synthase PurC [KO:K01923] [EC:6.3.2.6]
RCA23_c18220  purB; adenylosuccinate lyase PurB [KO:K01756] [EC:4.3.2.2]
RCA23_c28690  purH; bifunctional purine biosynthesis protein PurH [KO:K00602] [EC:2.1.2.3 3.5.4.10]
RCA23_c19380  apt; adenine phosphoribosyltransferase Apt [KO:K00759] [EC:2.4.2.7]
RCA23_c02330  surE1; 5'-nucleotidase SurE [KO:K11751] [EC:3.1.3.5 3.6.1.45]
RCA23_c13870  surE2; 5'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
RCA23_c14090  purine nucleoside phosphorylase deoD-type [KO:K03784] [EC:2.4.2.1]
RCA23_c20630  multi-copper polyphenol oxidoreductase laccase [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
RCA23_c15670  hpt; hypoxanthine phosphoribosyltransferase Hpt [KO:K00760] [EC:2.4.2.8]
RCA23_c16210  guaB; inosine-5'-monophosphate dehydrogenase GuaB [KO:K00088] [EC:1.1.1.205]
RCA23_c17710  ndk; nucleoside diphosphate kinase Ndk [KO:K00940] [EC:2.7.4.6]
RCA23_c30550  rdgB; nucleoside-triphosphatase RdgB [KO:K01519] [EC:3.6.1.66]
RCA23_c17180  gpt; xanthine phosphoribosyltransferase Gpt [KO:K00769] [EC:2.4.2.22]
RCA23_c21150  xdhA; xanthine dehydrogenase XdhA [KO:K13481] [EC:1.17.1.4]
RCA23_c21160  xdhB; xanthine dehydrogenase XdhB [KO:K13482] [EC:1.17.1.4]
RCA23_c15620  guaA; GMP synthase GuaA [KO:K01951] [EC:6.3.5.2]
RCA23_c06140  glutamine amidotransferase class-I [KO:K01951] [EC:6.3.5.2]
RCA23_c19140  guaD; guanine deaminase GuaD [KO:K01487] [EC:3.5.4.3]
RCA23_c16030  gmk; guanylate kinase Gmk [KO:K00942] [EC:2.7.4.8]
RCA23_c17110  nrdJ; vitamin B12-dependent ribonucleotide reductase NrdJ [KO:K00525] [EC:1.17.4.1]
RCA23_c21080  vitamin B12-dependent ribonucleoside-diphosphate reductase [KO:K00525] [EC:1.17.4.1]
RCA23_c16850  deoxyguanosinetriphosphate triphosphohydrolase-like protein [KO:K01129] [EC:3.1.5.1]
RCA23_c30260  hypothetical protein, metal-dependent phosphohydrolase [KO:K06952] [EC:3.1.3.89]
RCA23_c25760  spoT; guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase SpoT [KO:K01139] [EC:2.7.6.5 3.1.7.2]
RCA23_c17570  putative Ppx/GppA phosphatase family protein [KO:K01524] [EC:3.6.1.11 3.6.1.40]
RCA23_c28140  putative phosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
RCA23_c11590  cheY; response regulator CheY [KO:K01768] [EC:4.6.1.1]
RCA23_c27710  purA; adenylosuccinate synthase PurA [KO:K01939] [EC:6.3.4.4]
RCA23_c02070  add; adenosine deaminase Add [KO:K01488] [EC:3.5.4.4]
RCA23_c04540  amn; AMP nucleosidase Amn [KO:K01241] [EC:3.2.2.4]
RCA23_c04530  ade; adenine deaminase Ade [KO:K01486] [EC:3.5.4.2]
RCA23_c19010  hypothetical protein [KO:K09769] [EC:3.1.4.16]
RCA23_c24010  adk; adenylate kinase Adk [KO:K00939] [EC:2.7.4.3]
RCA23_c17920  mazG; protein MazG [KO:K04765] [EC:3.6.1.9]
RCA23_c22680  hypothetical protein, calcineurin-like phosphoesterase-like protein [KO:K03651] [EC:3.1.4.53]
RCA23_c10210  hypothetical protein, calcineurin-like phosphoesterase-like protein [KO:K03651] [EC:3.1.4.53]
RCA23_c20670  cysC; bifunctional sulfate adenylyltransferase / adenylyl-sulfate kinase CysC [KO:K00958] [EC:2.7.7.4]
RCA23_c19550  uraH; 5-hydroxyisourate hydrolase UraH [KO:K07127] [EC:3.5.2.17]
RCA23_c11220  hyuE; hydantoin racemase HyuE [KO:K16841] [EC:5.1.99.3]
RCA23_c19560  uric acid degradation bifunctional protein PucL [KO:K16842] [EC:3.5.2.5]
RCA23_c19570  putative allantoin catabolism protein YlbA [KO:K14977] [EC:3.5.3.26]
RCA23_c01370  allA; ureidoglycolate hydrolase AllA [KO:K01483] [EC:4.3.2.3]
RCA23_c06670  putative fumarylacetoacetate hydrolase [KO:K16856] [EC:4.3.2.3]
RCA23_c08850  ureC; urease alpha subunit UreC [KO:K01428] [EC:3.5.1.5]
RCA23_c08840  ureB; urease beta subunit UreB [KO:K01429] [EC:3.5.1.5]
RCA23_c08830  ureA; urease gamma subunit UreA [KO:K01430] [EC:3.5.1.5]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
ptp00030  Pentose phosphate pathway
ptp00220  Arginine biosynthesis
ptp00250  Alanine, aspartate and glutamate metabolism
ptp00260  Glycine, serine and threonine metabolism
ptp00340  Histidine metabolism
ptp00630  Glyoxylate and dicarboxylate metabolism
ptp00730  Thiamine metabolism
ptp00740  Riboflavin metabolism
ptp00790  Folate biosynthesis
KO pathway
ko00230   
LinkDB

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