KEGG   PATHWAY: pya00010
Entry
pya00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Pyrococcus yayanosii
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
pya00010  Glycolysis / Gluconeogenesis
pya00010

Module
pya_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:pya00010]
pya_M00002  Glycolysis, core module involving three-carbon compounds [PATH:pya00010]
pya_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:pya00010]
pya_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pya00010]
Other DBs
GO: 0006096 0006094
Organism
Pyrococcus yayanosii [GN:pya]
Gene
PYCH_15920  glucose-6-phosphate isomerase [KO:K06859] [EC:5.3.1.9]
PYCH_02450  ADP-specific phosphofructokinase [KO:K00918] [EC:2.7.1.146 2.7.1.147]
PYCH_10910  ADP-dependent glucokinase [KO:K00918] [EC:2.7.1.146 2.7.1.147]
PYCH_14890  Fructose 1,6-bisphosphate aldolase class 1 (fba) [KO:K11645] [EC:4.1.2.13]
PYCH_00240  thermophile-specific fructose-1,6-bisphosphatase [KO:K01622] [EC:4.1.2.13 3.1.3.11]
PYCH_13930  triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
PYCH_00860  glyceraldehyde-3-phosphate dehydrogenase [KO:K00150] [EC:1.2.1.59]
PYCH_00130  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
PYCH_00670  2,3-bisphosphoglycerate-independent phosphoglycerate mutase (apgM) [KO:K15635] [EC:5.4.2.12]
PYCH_02580  enolase [KO:K01689] [EC:4.2.1.11]
PYCH_12970  phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
PYCH_07870  pyruvate kinase [KO:K00873] [EC:2.7.1.40]
PYCH_14800  phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
PYCH_06610  pyruvate ferredoxin oxidoreductase subunit alpha [KO:K00169] [EC:1.2.7.1]
PYCH_06600  pyruvate ferredoxin oxidoreductase subunit beta [KO:K00170] [EC:1.2.7.1]
PYCH_06660  pyruvate ferredoxin oxidoreductase subunit gamma [KO:K00189] [EC:1.2.7.7 1.2.7.1]
PYCH_06620  pyuvate ferredoxin oxidoreductase subunit delta [KO:K00171] [EC:1.2.7.1]
PYCH_02350  2-oxoglutarate ferredoxin oxidoreductase subunit alpha [KO:K00174] [EC:1.2.7.3 1.2.7.11]
PYCH_02380  2-oxoglutarate ferredoxin oxidoreductase subunit alpha [KO:K00174] [EC:1.2.7.3 1.2.7.11]
PYCH_02340  2-oxoglutarate ferredoxin oxidoreductase subunit beta [KO:K00175] [EC:1.2.7.3 1.2.7.11]
PYCH_02370  2-oxoglutarate ferredoxin oxidoreductase subunit beta [KO:K00175] [EC:1.2.7.3 1.2.7.11]
PYCH_07600  ADP forming acetyl coenzyme A synthetase [KO:K01905] [EC:6.2.1.13]
PYCH_07060  AcdA-3 acetate--coA ligase (ADP-forming), alpha chain [KO:K01905] [EC:6.2.1.13]
PYCH_01240  acetyl-CoA synthase [KO:K01905] [EC:6.2.1.13]
PYCH_13120  CoA binding domain protein [KO:K01905] [EC:6.2.1.13]
PYCH_01250  Acetyl-CoA synthetase (ADP forming), beta chain (acdB) [KO:K22224] [EC:6.2.1.13]
PYCH_01760  AcdB acetate--coA ligase (ADP-forming), beta chain [KO:K22224] [EC:6.2.1.13]
PYCH_06990  phosphohexomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
PYCH_18690  tungsten-containing glyceraldehyde-3-phosphate:ferredoxin [KO:K11389] [EC:1.2.7.6]
PYCH_14070  phosphoenolpyruvate carboxykinase [KO:K01596] [EC:4.1.1.32]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
pya00020  Citrate cycle (TCA cycle)
pya00030  Pentose phosphate pathway
pya00500  Starch and sucrose metabolism
pya00620  Pyruvate metabolism
pya00640  Propanoate metabolism
pya00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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