KEGG   PATHWAY: rbz00630
Entry
rbz00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Aestuarium zhoushanense
Class
Metabolism; Carbohydrate metabolism
Pathway map
rbz00630  Glyoxylate and dicarboxylate metabolism
rbz00630

Module
rbz_M00373  Ethylmalonyl pathway [PATH:rbz00630]
rbz_M00621  Glycine cleavage system [PATH:rbz00630]
rbz_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:rbz00630]
Other DBs
GO: 0046487 0043648
Organism
Aestuarium zhoushanense [GN:rbz]
Gene
B9057_15295  acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
B9057_09585  malate synthase G [KO:K01638] [EC:2.3.3.9]
B9057_02165  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
B9057_05830  citrate (Si)-synthase [KO:K01647] [EC:2.3.3.1]
B9057_07520  bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase [KO:K01682] [EC:4.2.1.3 4.2.1.99]
B9057_15230  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
B9057_11755  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
B9057_15515  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
B9057_12885  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
B9057_04180  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
B9057_09440  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
B9057_11750  beta-ketoacyl-ACP reductase [KO:K00023] [EC:1.1.1.36]
B9057_03015  (R)-hydratase [KO:K17865] [EC:4.2.1.55]
B9057_00670  crotonyl-CoA carboxylase/reductase [KO:K14446] [EC:1.3.1.85]
B9057_01535  methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
B9057_00660  protein meaA [KO:K14447] [EC:5.4.99.63]
B9057_00825  acyl-CoA dehydrogenase [KO:K14448] [EC:1.3.8.12]
B9057_02190  hypothetical protein [KO:K14449] [EC:4.2.1.148]
B9057_11515  CoA ester lyase [KO:K08691] [EC:4.1.3.24 4.1.3.25]
B9057_02175  CoA ester lyase [KO:K14451] [EC:3.1.2.30]
B9057_04970  acetyl/propionyl-CoA carboxylase subunit alpha [KO:K01965] [EC:6.4.1.3]
B9057_04945  methylmalonyl-CoA carboxyltransferase [KO:K01966] [EC:6.4.1.3 2.1.3.15]
B9057_04985  methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
B9057_09575  FAD-binding oxidoreductase [KO:K00104] [EC:1.1.99.14]
B9057_09570  hypothetical protein [KO:K11472] [EC:1.1.99.14]
B9057_09565  glycolate oxidase iron-sulfur subunit [KO:K11473] [EC:1.1.99.14]
B9057_02405  D-glycerate dehydrogenase [KO:K00015] [EC:1.1.1.26]
B9057_02670  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
B9057_01145  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
B9057_08065  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
B9057_08905  haloacid dehalogenase [KO:K01091] [EC:3.1.3.18]
B9057_04680  phosphatase [KO:K01091] [EC:3.1.3.18]
B9057_10340  aminotransferase [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
B9057_05490  type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
B9057_10870  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
B9057_10880  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
B9057_07485  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
B9057_14020  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
B9057_09525  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
B9057_03195  glycine dehydrogenase (aminomethyl-transferring) [KO:K00281] [EC:1.4.4.2]
B9057_03185  gcvT; glycine cleavage system protein T [KO:K00605] [EC:2.1.2.10]
B9057_02130  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
B9057_08475  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
B9057_03190  glycine cleavage system protein H [KO:K02437]
B9057_05205  glycerate kinase [KO:K11529] [EC:2.7.1.165]
B9057_04015  fumarate hydratase [KO:K03779] [EC:4.2.1.32]
B9057_04020  fumarate hydratase [KO:K03780] [EC:4.2.1.32]
B9057_08205  keto-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
B9057_11170  formate dehydrogenase [KO:K00126] [EC:1.17.1.9]
B9057_11180  formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
B9057_11185  formate dehydrogenase [KO:K00124]
B9057_11190  formate dehydrogenase subunit gamma [KO:K00127]
B9057_10635  formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
rbz00010  Glycolysis / Gluconeogenesis
rbz00020  Citrate cycle (TCA cycle)
rbz00030  Pentose phosphate pathway
rbz00053  Ascorbate and aldarate metabolism
rbz00071  Fatty acid degradation
rbz00230  Purine metabolism
rbz00250  Alanine, aspartate and glutamate metabolism
rbz00260  Glycine, serine and threonine metabolism
rbz00620  Pyruvate metabolism
rbz00710  Carbon fixation by Calvin cycle
rbz00750  Vitamin B6 metabolism
rbz00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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