KEGG   PATHWAY: rro03250
Entry
rro03250                    Pathway                                
Name
Viral life cycle - HIV-1 - Rhinopithecus roxellana (golden snub-nosed monkey)
Class
Genetic Information Processing; Information processing in viruses
Pathway map
rro03250  Viral life cycle - HIV-1
rro03250

Organism
Rhinopithecus roxellana (golden snub-nosed monkey) [GN:rro]
Gene
104671328  CCR5; C-C chemokine receptor type 5 [KO:K04180]
104668781  CXCR4; C-X-C chemokine receptor type 4 [KO:K04189]
104680099  CD4; T-cell surface glycoprotein CD4 [KO:K06454]
104660963  MAP1S; microtubule-associated protein 1S [KO:K10429]
104678491  MAP1A; microtubule-associated protein 1A [KO:K10429]
104675647  MAP1B; microtubule-associated protein 1B [KO:K10429]
104653933  FEZ1; fasciculation and elongation protein zeta-1 isoform X1 [KO:K25663]
104671593  BICD2; protein bicaudal D homolog 2 isoform X1 [KO:K18739]
104668322  BICD1; protein bicaudal D homolog 1 isoform X1 [KO:K18739]
104663393  TRIM5; tripartite motif-containing protein 5 [KO:K10648] [EC:2.3.2.27]
104682552  APOBEC3G; DNA dC->dU-editing enzyme APOBEC-3G [KO:K18750] [EC:3.5.4.-]
108684023  APOBEC3C; DNA dC->dU-editing enzyme APOBEC-3C [KO:K18750] [EC:3.5.4.-]
104682550  APOBEC3H; DNA dC->dU-editing enzyme APOBEC-3H isoform X3 [KO:K18750] [EC:3.5.4.-]
104682553  APOBEC3F; DNA dC->dU-editing enzyme APOBEC-3F isoform X3 [KO:K18750] [EC:3.5.4.-]
104682554  APOBEC3D; DNA dC->dU-editing enzyme APOBEC-3F [KO:K18750] [EC:3.5.4.-]
104682555  APOBEC3B; DNA dC->dU-editing enzyme APOBEC-3B [KO:K18750] [EC:3.5.4.-]
104682557  APOBEC3A; DNA dC->dU-editing enzyme APOBEC-3A [KO:K18750] [EC:3.5.4.-]
104655804  SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 isoform X1 [KO:K22544] [EC:3.1.5.-]
104655579  PSIP1; PC4 and SFRS1-interacting protein isoform X1 [KO:K25057]
104670497  PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [KO:K09578] [EC:5.2.1.8]
104667417  SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 isoform X1 [KO:K11648]
104656233  peptidyl-prolyl cis-trans isomerase A [KO:K03767] [EC:5.2.1.8]
104665939  peptidyl-prolyl cis-trans isomerase A [KO:K03767] [EC:5.2.1.8]
104659546  peptidyl-prolyl cis-trans isomerase A [KO:K03767] [EC:5.2.1.8]
104679695  peptidyl-prolyl cis-trans isomerase A [KO:K03767] [EC:5.2.1.8]
104662145  peptidyl-prolyl cis-trans isomerase A [KO:K03767] [EC:5.2.1.8]
104671154  PPIA; peptidyl-prolyl cis-trans isomerase A [KO:K03767] [EC:5.2.1.8]
104673896  peptidyl-prolyl cis-trans isomerase A [KO:K03767] [EC:5.2.1.8]
104668251  peptidyl-prolyl cis-trans isomerase A [KO:K03767] [EC:5.2.1.8]
104680824  peptidyl-prolyl cis-trans isomerase A [KO:K03767] [EC:5.2.1.8]
104672776  peptidyl-prolyl cis-trans isomerase A [KO:K03767] [EC:5.2.1.8]
104676137  peptidyl-prolyl cis-trans isomerase A [KO:K03767] [EC:5.2.1.8]
104672407  peptidyl-prolyl cis-trans isomerase A [KO:K03767] [EC:5.2.1.8]
104672481  peptidyl-prolyl cis-trans isomerase A [KO:K03767] [EC:5.2.1.8]
104667762  peptidyl-prolyl cis-trans isomerase A [KO:K03767] [EC:5.2.1.8]
104658327  peptidyl-prolyl cis-trans isomerase A [KO:K03767] [EC:5.2.1.8]
115894621  peptidyl-prolyl cis-trans isomerase A-like [KO:K03767] [EC:5.2.1.8]
115897425  peptidyl-prolyl cis-trans isomerase A [KO:K03767] [EC:5.2.1.8]
115894321  peptidyl-prolyl cis-trans isomerase A [KO:K03767] [EC:5.2.1.8]
104679388  CPSF7; cleavage and polyadenylation specificity factor subunit 7 isoform X1 [KO:K14398]
104658665  CPSF6; cleavage and polyadenylation specificity factor subunit 6 isoform X1 [KO:K14398]
104674442  TNPO3; transportin-3 isoform X1 [KO:K15436]
104655127  MX1; interferon-induced GTP-binding protein Mx1 [KO:K14754]
104655128  MX2; interferon-induced GTP-binding protein Mx2 [KO:K14754]
104666650  E3 SUMO-protein ligase RanBP2 isoform X1 [KO:K12172] [EC:2.3.2.-]
104653666  NUP153; nuclear pore complex protein Nup153 isoform X1 [KO:K14296]
104673260  EP300; histone acetyltransferase p300 [KO:K04498] [EC:2.3.1.48]
104672289  CREBBP; CREB-binding protein isoform X1 [KO:K04498] [EC:2.3.1.48]
104680633  KAT2A; histone acetyltransferase KAT2A [KO:K06062] [EC:2.3.1.48]
104665709  KAT2B; histone acetyltransferase KAT2B isoform X1 [KO:K06062] [EC:2.3.1.48]
104665877  CDK9; cyclin-dependent kinase 9 [KO:K02211] [EC:2.7.11.22 2.7.11.23]
104665579  CCNT2; cyclin-T2 isoform X1 [KO:K15188]
104654860  CCNT1; cyclin-T1 [KO:K15188]
104659824  AFF4; AF4/FMR2 family member 4 isoform X1 [KO:K15185]
104679627  ELL3; RNA polymerase II elongation factor ELL3 isoform X1 [KO:K15183]
104680623  ELL; RNA polymerase II elongation factor ELL [KO:K15183]
104675934  ELL2; RNA polymerase II elongation factor ELL2 [KO:K15183]
104666375  MLLT3; protein AF-9 isoform X1 [KO:K15187]
104665474  MLLT1; protein ENL isoform X1 [KO:K15187]
104678938  NELFA; negative elongation factor A [KO:K15179]
104669620  NELFB; negative elongation factor B [KO:K15180]
104663881  NELFCD; negative elongation factor C/D [KO:K15181]
104678119  NELFE; negative elongation factor E [KO:K15182]
104675784  negative elongation factor E-like [KO:K15182]
104669828  SUPT4H1; transcription elongation factor SPT4 [KO:K15171]
104676145  SUPT5H; transcription elongation factor SPT5 [KO:K15172]
104673347  XPO1; exportin-1 isoform X1 [KO:K14290]
104655552  RAN; GTP-binding nuclear protein Ran isoform X1 [KO:K07936]
104674363  GTP-binding nuclear protein Ran-like [KO:K07936]
104679270  FURIN; furin [KO:K01349] [EC:3.4.21.75]
104678870  SERINC3; serine incorporator 3 [KO:K25661]
104680174  SERINC5; serine incorporator 5 isoform X1 [KO:K25655]
104660973  BST2; bone marrow stromal antigen 2 [KO:K06731]
104654960  HGS; hepatocyte growth factor-regulated tyrosine kinase substrate isoform X3 [KO:K12182]
104667653  TSG101; LOW QUALITY PROTEIN: tumor susceptibility gene 101 protein [KO:K12183]
104655006  CHMP6; LOW QUALITY PROTEIN: charged multivesicular body protein 6 [KO:K12195]
104660275  CHMP4B; charged multivesicular body protein 4b [KO:K12194]
104662690  CHMP4A; charged multivesicular body protein 4a [KO:K12194]
104669863  PDCD6IP; programmed cell death 6-interacting protein isoform X1 [KO:K12200]
104655887  VPS4A; vacuolar protein sorting-associated protein 4A isoform X1 [KO:K12196]
104682246  VPS4B; vacuolar protein sorting-associated protein 4B isoform X1 [KO:K12196]
Reference
PMID:27357278
  Authors
Li G, De Clercq E
  Title
HIV Genome-Wide Protein Associations: a Review of 30 Years of Research.
  Journal
Microbiol Mol Biol Rev 80:679-731 (2016)
DOI:10.1128/MMBR.00065-15
Reference
PMID:21284899
  Authors
Tagliamonte M, Tornesello ML, Buonaguro FM, Buonaguro L
  Title
Conformational HIV-1 envelope on particulate structures: a tool for chemokine coreceptor binding studies.
  Journal
J Transl Med 9 Suppl 1:S1 (2011)
DOI:10.1186/1479-5876-9-S1-S1
Reference
PMID:31028522
  Authors
Novikova M, Zhang Y, Freed EO, Peng K
  Title
Multiple Roles of HIV-1 Capsid during the Virus Replication Cycle.
  Journal
Virol Sin 34:119-134 (2019)
DOI:10.1007/s12250-019-00095-3
Reference
PMID:30286189
  Authors
Rawle DJ, Harrich D
  Title
Toward the "unravelling" of HIV: Host cell factors involved in HIV-1 core uncoating.
  Journal
PLoS Pathog 14:e1007270 (2018)
DOI:10.1371/journal.ppat.1007270
Reference
PMID:25036886
  Authors
Le Sage V, Mouland AJ, Valiente-Echeverria F
  Title
Roles of HIV-1 capsid in viral replication and immune evasion.
  Journal
Virus Res 193:116-29 (2014)
DOI:10.1016/j.virusres.2014.07.010
Reference
PMID:32429351
  Authors
Murphy RE, Saad JS
  Title
The Interplay between HIV-1 Gag Binding to the Plasma Membrane and Env Incorporation.
  Journal
Viruses 12:E548 (2020)
DOI:10.3390/v12050548
Reference
PMID:21360054
  Authors
He N, Zhou Q
  Title
New insights into the control of HIV-1 transcription: when Tat meets the 7SK snRNP and super elongation complex (SEC).
  Journal
J Neuroimmune Pharmacol 6:260-8 (2011)
DOI:10.1007/s11481-011-9267-6
Reference
PMID:19865606
  Authors
Pincetic A, Leis J
  Title
The Mechanism of Budding of Retroviruses From Cell Membranes.
  Journal
Adv Virol 2009:6239691-6239699 (2009)
DOI:10.1155/2009/623969
Reference
PMID:32858867
  Authors
Kleinpeter AB, Freed EO
  Title
HIV-1 Maturation: Lessons Learned from Inhibitors.
  Journal
Viruses 12:E940 (2020)
DOI:10.3390/v12090940
Related
pathway
rro03013  Nucleocytoplasmic transport
rro04144  Endocytosis
KO pathway
ko03250   
LinkDB

DBGET integrated database retrieval system