KEGG   PATHWAY: sawl00030
Entry
sawl00030                   Pathway                                
Name
Pentose phosphate pathway - Natronosalvus rutilus
Description
The pentose phosphate pathway is a process of glucose turnover that produces NADPH as reducing equivalents and pentoses as essential parts of nucleotides. There are two different phases in the pathway. One is irreversible oxidative phase in which glucose-6P is converted to ribulose-5P by oxidative decarboxylation, and NADPH is generated [MD:M00006]. The other is reversible non-oxidative phase in which phosphorylated sugars are interconverted to generate xylulose-5P, ribulose-5P, and ribose-5P [MD:M00007]. Phosphoribosyl pyrophosphate (PRPP) formed from ribose-5P [MD:M00005] is an activated compound used in the biosynthesis of histidine and purine/pyrimidine nucleotides. This pathway map also shows the Entner-Doudoroff pathway where 6-P-gluconate is dehydrated and then cleaved into pyruvate and glyceraldehyde-3P [MD:M00008].
Class
Metabolism; Carbohydrate metabolism
Pathway map
sawl00030  Pentose phosphate pathway
sawl00030

Module
sawl_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:sawl00030]
sawl_M00968  Pentose bisphosphate pathway (nucleoside degradation), archaea, nucleoside/NMP => 3-PGA/glycerone phosphate [PATH:sawl00030]
Other DBs
GO: 0006098
Organism
Natronosalvus rutilus [GN:sawl]
Gene
NGM29_04570  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
NGM29_04355  NAD(P)-dependent oxidoreductase [KO:K19243] [EC:1.1.1.388]
NGM29_02280  6-phosphogluconate dehydrogenase [KO:K00033] [EC:1.1.1.44 1.1.1.343]
NGM29_03085  rpiA; ribose-5-phosphate isomerase RpiA [KO:K01807] [EC:5.3.1.6]
NGM29_15720  deoC; deoxyribose-phosphate aldolase [KO:K01619] [EC:4.1.2.4]
NGM29_07970  phosphomannomutase [KO:K22199] [EC:5.4.2.7]
NGM29_03955  glmM; phosphoglucosamine mutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
NGM29_17195  carbohydrate kinase family protein [KO:K26208] [EC:2.7.1.239]
NGM29_17185  ribose 1,5-bisphosphate isomerase [KO:K18237] [EC:5.3.1.29]
NGM29_03940  ribose-phosphate diphosphokinase [KO:K00948] [EC:2.7.6.1]
NGM29_03715  SDR family oxidoreductase [KO:K00034] [EC:1.1.1.47]
NGM29_18665  SDR family oxidoreductase [KO:K00034] [EC:1.1.1.47]
NGM29_13845  glucose 1-dehydrogenase [KO:K22969] [EC:1.1.1.47]
NGM29_00435  GMC family oxidoreductase [KO:K19813] [EC:1.1.5.9]
NGM29_12820  mandelate racemase/muconate lactonizing enzyme family protein [KO:K05308] [EC:4.2.1.140]
NGM29_14000  mandelate racemase/muconate lactonizing enzyme family protein [KO:K05308] [EC:4.2.1.140]
NGM29_00345  sugar kinase [KO:K00874] [EC:2.7.1.45]
NGM29_06825  sugar kinase [KO:K00874] [EC:2.7.1.45]
NGM29_01010  aldehyde ferredoxin oxidoreductase [KO:K03738] [EC:1.2.7.5]
NGM29_13790  aldehyde ferredoxin oxidoreductase [KO:K03738] [EC:1.2.7.5]
NGM29_15815  aldehyde ferredoxin oxidoreductase family protein [KO:K03738] [EC:1.2.7.5]
NGM29_15050  DUF4147 domain-containing protein [KO:K11529] [EC:2.7.1.165]
NGM29_00150  class I fructose-bisphosphate aldolase [KO:K11645] [EC:4.1.2.13]
NGM29_19285  aldolase [KO:K11645] [EC:4.1.2.13]
NGM29_18115  2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [KO:K16306] [EC:4.1.2.13 2.2.1.10]
NGM29_00155  fructose-1,6-bisphosphatase [KO:K03841] [EC:3.1.3.11]
NGM29_19280  ADP-dependent glucokinase/phosphofructokinase [KO:K00918] [EC:2.7.1.146 2.7.1.147]
Compound
C00022  Pyruvate
C00031  D-Glucose
C00085  D-Fructose 6-phosphate
C00117  D-Ribose 5-phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00121  D-Ribose
C00197  3-Phospho-D-glycerate
C00198  D-Glucono-1,5-lactone
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00221  beta-D-Glucose
C00231  D-Xylulose 5-phosphate
C00257  D-Gluconic acid
C00258  D-Glycerate
C00279  D-Erythrose 4-phosphate
C00345  6-Phospho-D-gluconate
C00354  D-Fructose 1,6-bisphosphate
C00577  D-Glyceraldehyde
C00620  alpha-D-Ribose 1-phosphate
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C00672  2-Deoxy-D-ribose 1-phosphate
C00673  2-Deoxy-D-ribose 5-phosphate
C01151  D-Ribose 1,5-bisphosphate
C01172  beta-D-Glucose 6-phosphate
C01182  D-Ribulose 1,5-bisphosphate
C01218  6-Phospho-2-dehydro-D-gluconate
C01236  D-Glucono-1,5-lactone 6-phosphate
C01801  Deoxyribose
C02076  Sedoheptulose
C03752  2-Amino-2-deoxy-D-gluconate
C04442  2-Dehydro-3-deoxy-6-phospho-D-gluconate
C05382  Sedoheptulose 7-phosphate
C06019  D-arabino-Hex-3-ulose 6-phosphate
C06473  2-Keto-D-gluconic acid
C20589  D-Glucosaminate-6-phosphate
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Reference
  Authors
Hove-Jensen B, Rosenkrantz TJ, Haldimann A, Wanner BL.
  Title
Escherichia coli phnN, encoding ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming): dual role in phosphonate degradation and NAD biosynthesis pathways.
  Journal
J Bacteriol 185:2793-801 (2003)
DOI:10.1128/JB.185.9.2793-2801.2003
Reference
  Authors
Orita I, Sato T, Yurimoto H, Kato N, Atomi H, Imanaka T, Sakai Y
  Title
The ribulose monophosphate pathway substitutes for the missing pentose phosphate pathway in the archaeon Thermococcus kodakaraensis.
  Journal
J Bacteriol 188:4698-704 (2006)
DOI:10.1128/JB.00492-06
Reference
  Authors
Kato N, Yurimoto H, Thauer RK
  Title
The physiological role of the ribulose monophosphate pathway in bacteria and archaea.
  Journal
Biosci Biotechnol Biochem 70:10-21 (2006)
DOI:10.1271/bbb.70.10
Reference
  Authors
Kouril T, Wieloch P, Reimann J, Wagner M, Zaparty M, Albers SV, Schomburg D, Ruoff P, Siebers B
  Title
Unraveling the function of the two Entner-Doudoroff branches in the thermoacidophilic Crenarchaeon Sulfolobus solfataricus P2.
  Journal
FEBS J 280:1126-38 (2013)
DOI:10.1111/febs.12106
Reference
  Authors
Reher M, Schonheit P
  Title
Glyceraldehyde dehydrogenases from the thermoacidophilic euryarchaeota Picrophilus torridus and Thermoplasma acidophilum, key enzymes of the non-phosphorylative Entner-Doudoroff pathway, constitute a novel enzyme family within the aldehyde dehydrogenase superfamily.
  Journal
FEBS Lett 580:1198-204 (2006)
DOI:10.1016/j.febslet.2006.01.029
Reference
  Authors
Reher M, Fuhrer T, Bott M, Schonheit P
  Title
The nonphosphorylative Entner-Doudoroff pathway in the thermoacidophilic euryarchaeon Picrophilus torridus involves a novel 2-keto-3-deoxygluconate- specific aldolase.
  Journal
J Bacteriol 192:964-74 (2010)
DOI:10.1128/JB.01281-09
Related
pathway
sawl00010  Glycolysis / Gluconeogenesis
sawl00040  Pentose and glucuronate interconversions
sawl00052  Galactose metabolism
sawl00230  Purine metabolism
sawl00240  Pyrimidine metabolism
sawl00340  Histidine metabolism
sawl00630  Glyoxylate and dicarboxylate metabolism
sawl00750  Vitamin B6 metabolism
KO pathway
ko00030   
LinkDB

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