KEGG   PATHWAY: setr00010
Entry
setr00010                   Pathway                                
Name
Glycolysis / Gluconeogenesis - Suncus etruscus (white-toothed pygmy shrew)
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
setr00010  Glycolysis / Gluconeogenesis
setr00010

Module
setr_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:setr00010]
setr_M00002  Glycolysis, core module involving three-carbon compounds [PATH:setr00010]
setr_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:setr00010]
setr_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:setr00010]
Other DBs
GO: 0006096 0006094
Organism
Suncus etruscus (white-toothed pygmy shrew) [GN:setr]
Gene
126011928  HK3; hexokinase-3 [KO:K00844] [EC:2.7.1.1]
125994999  HKDC1; hexokinase HKDC1 [KO:K00844] [EC:2.7.1.1]
126024783  HK2; hexokinase-2 [KO:K00844] [EC:2.7.1.1]
126033517  HK1; hexokinase-1 [KO:K00844] [EC:2.7.1.1]
126031378  GCK; hexokinase-4 [KO:K12407] [EC:2.7.1.2]
126027608  GPI; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
126013282  PFKP; ATP-dependent 6-phosphofructokinase, platelet type [KO:K00850] [EC:2.7.1.11]
126022330  PFKM; ATP-dependent 6-phosphofructokinase, muscle type [KO:K00850] [EC:2.7.1.11]
126025629  PFKL; ATP-dependent 6-phosphofructokinase, liver type [KO:K00850] [EC:2.7.1.11]
126006752  FBP2; fructose-1,6-bisphosphatase isozyme 2 [KO:K03841] [EC:3.1.3.11]
126006801  FBP1; fructose-1,6-bisphosphatase 1 [KO:K03841] [EC:3.1.3.11]
126029529  ALDOA; fructose-bisphosphate aldolase A [KO:K01623] [EC:4.1.2.13]
126003824  ALDOB; fructose-bisphosphate aldolase B [KO:K01623] [EC:4.1.2.13]
126006808  ALDOC; fructose-bisphosphate aldolase C [KO:K01623] [EC:4.1.2.13]
126006610  TPI1; triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
126006595  GAPDH; glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
126026010  glyceraldehyde-3-phosphate dehydrogenase-like [KO:K00134] [EC:1.2.1.12]
126009349  LOW QUALITY PROTEIN: glyceraldehyde-3-phosphate dehydrogenase-like [KO:K00134] [EC:1.2.1.12]
126020027  LOW QUALITY PROTEIN: glyceraldehyde-3-phosphate dehydrogenase-like [KO:K00134] [EC:1.2.1.12]
126027639  GAPDHS; glyceraldehyde-3-phosphate dehydrogenase, testis-specific isoform X1 [KO:K10705] [EC:1.2.1.12]
125996439  PGK2; phosphoglycerate kinase 2 [KO:K00927] [EC:2.7.2.3]
125998581  PGK1; phosphoglycerate kinase 1 [KO:K00927] [EC:2.7.2.3]
126020421  PGAM2; phosphoglycerate mutase 2 [KO:K01834] [EC:5.4.2.11]
125994814  PGAM1; phosphoglycerate mutase 1 [KO:K01834] [EC:5.4.2.11]
126006572  ENO2; gamma-enolase [KO:K01689] [EC:4.2.1.11]
126009263  LOW QUALITY PROTEIN: beta-enolase-like [KO:K01689] [EC:4.2.1.11]
126011225  ENO3; beta-enolase [KO:K01689] [EC:4.2.1.11]
126011539  ENO1; alpha-enolase [KO:K01689] [EC:4.2.1.11]
125994970  ENO4; enolase 4 [KO:K27394] [EC:4.2.1.11]
126015002  PKM; pyruvate kinase PKM isoform X1 [KO:K00873] [EC:2.7.1.40]
126020141  PKLR; pyruvate kinase PKLR [KO:K12406] [EC:2.7.1.40]
126001836  pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial-like [KO:K00161] [EC:1.2.4.1]
126032228  PDHA2; LOW QUALITY PROTEIN: pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial [KO:K00161] [EC:1.2.4.1]
125998734  PDHA1; pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial isoform X1 [KO:K00161] [EC:1.2.4.1]
126020023  pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial-like [KO:K00161] [EC:1.2.4.1]
126013218  PDHB; pyruvate dehydrogenase E1 component subunit beta, mitochondrial [KO:K00162] [EC:1.2.4.1]
126016112  DLAT; dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial [KO:K00627] [EC:2.3.1.12]
126022408  DLD; dihydrolipoyl dehydrogenase, mitochondrial [KO:K00382] [EC:1.8.1.4]
126022808  LDHB; L-lactate dehydrogenase B chain [KO:K00016] [EC:1.1.1.27]
125996450  L-lactate dehydrogenase A-like 6A [KO:K00016] [EC:1.1.1.27]
126007406  LOW QUALITY PROTEIN: L-lactate dehydrogenase A chain-like [KO:K00016] [EC:1.1.1.27]
126018942  LDHA; L-lactate dehydrogenase A chain [KO:K00016] [EC:1.1.1.27]
126018958  L-lactate dehydrogenase C chain-like [KO:K00016] [EC:1.1.1.27]
126025489  ADH1C; alcohol dehydrogenase 1C [KO:K13951] [EC:1.1.1.1]
126025491  all-trans-retinol dehydrogenase [NAD(+)] ADH7 [KO:K13951] [EC:1.1.1.1]
126025507  all-trans-retinol dehydrogenase [NAD(+)] ADH4-like [KO:K13980] [EC:1.1.1.1]
126025979  all-trans-retinol dehydrogenase [NAD(+)] ADH4-like [KO:K13980] [EC:1.1.1.1]
126025488  ADH5; alcohol dehydrogenase class-3 isoform X1 [KO:K00121] [EC:1.1.1.284 1.1.1.1]
126032540  LOW QUALITY PROTEIN: alcohol dehydrogenase class-3-like [KO:K00121] [EC:1.1.1.284 1.1.1.1]
126011209  AKR1A1; aldo-keto reductase family 1 member A1 [KO:K00002] [EC:1.1.1.2]
126013692  ALDH3A2; aldehyde dehydrogenase family 3 member A2 isoform X1 [KO:K00128] [EC:1.2.1.3]
126023505  ALDH1B1; aldehyde dehydrogenase X, mitochondrial [KO:K00128] [EC:1.2.1.3]
126031066  ALDH2; aldehyde dehydrogenase, mitochondrial [KO:K00128] [EC:1.2.1.3]
126027186  ALDH16A1; aldehyde dehydrogenase family 16 member A1 isoform X1 [KO:K00128] [EC:1.2.1.3]
126006426  ALDH7A1; alpha-aminoadipic semialdehyde dehydrogenase [KO:K14085] [EC:1.2.1.31 1.2.1.8 1.2.1.3]
126013406  ALDH9A1; 4-trimethylaminobutyraldehyde dehydrogenase [KO:K00149] [EC:1.2.1.47 1.2.1.3]
126013702  ALDH3A1; aldehyde dehydrogenase, dimeric NADP-preferring [KO:K00129] [EC:1.2.1.5]
126018797  aldehyde dehydrogenase family 3 member B2-like [KO:K00129] [EC:1.2.1.5]
126019060  ALDH3B1; aldehyde dehydrogenase family 3 member B1 isoform X1 [KO:K00129] [EC:1.2.1.5]
126013244  ACSS1; acetyl-coenzyme A synthetase 2-like, mitochondrial [KO:K01895] [EC:6.2.1.1]
126017503  ACSS2; acetyl-coenzyme A synthetase, cytoplasmic [KO:K01895] [EC:6.2.1.1]
126023880  GALM; LOW QUALITY PROTEIN: galactose mutarotase [KO:K01785] [EC:5.1.3.3]
126010804  PGM1; phosphoglucomutase-1 [KO:K01835] [EC:5.4.2.2]
126032447  PGM2; phosphopentomutase [KO:K15779] [EC:5.4.2.2 5.4.2.7]
126009115  G6PC2; glucose-6-phosphatase 2 isoform X1 [KO:K01084] [EC:3.1.3.9]
126000890  G6PC1; LOW QUALITY PROTEIN: glucose-6-phosphatase catalytic subunit 1 [KO:K01084] [EC:3.1.3.9]
126018615  G6PC3; glucose-6-phosphatase 3 [KO:K01084] [EC:3.1.3.9]
126015161  ADPGK; ADP-dependent glucokinase isoform X1 [KO:K08074] [EC:2.7.1.147]
126011675  BPGM; bisphosphoglycerate mutase [KO:K01837] [EC:5.4.2.4 5.4.2.11]
125995077  MINPP1; multiple inositol polyphosphate phosphatase 1 isoform X1 [KO:K03103] [EC:3.1.3.62 3.1.3.80]
126001919  PCK2; phosphoenolpyruvate carboxykinase [GTP], mitochondrial [KO:K01596] [EC:4.1.1.32]
126013306  PCK1; phosphoenolpyruvate carboxykinase, cytosolic [GTP] [KO:K01596] [EC:4.1.1.32]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
setr00020  Citrate cycle (TCA cycle)
setr00030  Pentose phosphate pathway
setr00500  Starch and sucrose metabolism
setr00620  Pyruvate metabolism
setr00640  Propanoate metabolism
KO pathway
ko00010   
LinkDB

DBGET integrated database retrieval system