KEGG   PATHWAY: sjo00010
Entry
sjo00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Scomber japonicus (chub mackerel)
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
sjo00010  Glycolysis / Gluconeogenesis
sjo00010

Module
sjo_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:sjo00010]
sjo_M00002  Glycolysis, core module involving three-carbon compounds [PATH:sjo00010]
sjo_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:sjo00010]
sjo_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:sjo00010]
Other DBs
GO: 0006096 0006094
Organism
Scomber japonicus (chub mackerel) [GN:sjo]
Gene
128363342  hk1; hexokinase-1 [KO:K00844] [EC:2.7.1.1]
128363349  hexokinase HKDC1-like [KO:K00844] [EC:2.7.1.1]
128364326  hk2; hexokinase-2 [KO:K00844] [EC:2.7.1.1]
128375345  LOW QUALITY PROTEIN: hexokinase-1-like [KO:K00844] [EC:2.7.1.1]
128365387  gck; hexokinase-4 [KO:K12407] [EC:2.7.1.2]
128378750  gpib; glucose-6-phosphate isomerase b [KO:K01810] [EC:5.3.1.9]
128368393  pfkla; ATP-dependent 6-phosphofructokinase, liver type [KO:K00850] [EC:2.7.1.11]
128369482  ATP-dependent 6-phosphofructokinase, platelet type-like isoform X1 [KO:K00850] [EC:2.7.1.11]
128355455  pfkmb; phosphofructokinase, muscle b [KO:K00850] [EC:2.7.1.11]
128382242  pfkpa; ATP-dependent 6-phosphofructokinase, platelet type isoform X1 [KO:K00850] [EC:2.7.1.11]
128357247  pfkma; phosphofructokinase, muscle a isoform X1 [KO:K00850] [EC:2.7.1.11]
128380308  fbp1b; fructose-1,6-bisphosphatase 1b [KO:K03841] [EC:3.1.3.11]
128364462  fbp1a; fructose-1,6-bisphosphatase 1a [KO:K03841] [EC:3.1.3.11]
128365382  fbp2; fructose-1,6-bisphosphatase isozyme 2 [KO:K03841] [EC:3.1.3.11]
128362596  aldob; fructose-bisphosphate aldolase B [KO:K01623] [EC:4.1.2.13]
128379604  fructose-bisphosphate aldolase A-like [KO:K01623] [EC:4.1.2.13]
128381897  aldoab; aldolase a, fructose-bisphosphate, b [KO:K01623] [EC:4.1.2.13]
128360195  aldoca; fructose-bisphosphate aldolase C-A [KO:K01623] [EC:4.1.2.13]
128371426  aldocb; fructose-bisphosphate aldolase C-B [KO:K01623] [EC:4.1.2.13]
128374701  tpi1a; triosephosphate isomerase A [KO:K01803] [EC:5.3.1.1]
128365867  tpi1b; triosephosphate isomerase B [KO:K01803] [EC:5.3.1.1]
128374695  glyceraldehyde-3-phosphate dehydrogenase-like [KO:K00134] [EC:1.2.1.12]
128365856  gapdh; glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
128365978  gapdhs; glyceraldehyde-3-phosphate dehydrogenase 2 [KO:K10705] [EC:1.2.1.12]
128371251  pgk1; phosphoglycerate kinase 1 [KO:K00927] [EC:2.7.2.3]
128380208  pgam2; phosphoglycerate mutase 2 [KO:K01834] [EC:5.4.2.11]
128369734  pgam1b; phosphoglycerate mutase 1b [KO:K01834] [EC:5.4.2.11]
128373160  phosphoglycerate mutase 1 [KO:K01834] [EC:5.4.2.11]
128374705  gamma-enolase-like [KO:K01689] [EC:4.2.1.11]
128354941  eno1b; enolase 1b, (alpha) [KO:K01689] [EC:4.2.1.11]
128365854  gamma-enolase-like isoform X1 [KO:K01689] [EC:4.2.1.11]
128384089  eno3; beta-enolase [KO:K01689] [EC:4.2.1.11]
128356983  eno1a; enolase 1a, (alpha) [KO:K01689] [EC:4.2.1.11]
128372576  eno4; enolase 4 [KO:K27394] [EC:4.2.1.11]
128359321  pkmb; pyruvate kinase M1/2b [KO:K00873] [EC:2.7.1.40]
128366468  pklr; pyruvate kinase PKLR [KO:K00873] [EC:2.7.1.40]
128356578  pkma; pyruvate kinase PKM isoform X1 [KO:K00873] [EC:2.7.1.40]
128371335  pdha1a; pyruvate dehydrogenase E1 subunit alpha 1a [KO:K00161] [EC:1.2.4.1]
128382123  pyruvate dehydrogenase E1 component subunit alpha, mitochondrial-like isoform X1 [KO:K00161] [EC:1.2.4.1]
128355898  pdhb; pyruvate dehydrogenase E1 component subunit beta, mitochondrial [KO:K00162] [EC:1.2.4.1]
128371391  dlat; dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial [KO:K00627] [EC:2.3.1.12]
128359160  dldh; dihydrolipoyl dehydrogenase, mitochondrial [KO:K00382] [EC:1.8.1.4]
128353074  ldhba; L-lactate dehydrogenase B-A chain [KO:K00016] [EC:1.1.1.27]
128358448  L-lactate dehydrogenase B-A chain [KO:K00016] [EC:1.1.1.27]
128358676  ldha; L-lactate dehydrogenase A chain [KO:K00016] [EC:1.1.1.27]
128362555  alcohol dehydrogenase class-3 [KO:K00121] [EC:1.1.1.284 1.1.1.1]
128362574  alcohol dehydrogenase class-3-like [KO:K00121] [EC:1.1.1.284 1.1.1.1]
128375030  alcohol dehydrogenase 1 [KO:K00121] [EC:1.1.1.284 1.1.1.1]
128375031  alcohol dehydrogenase 1-like [KO:K00121] [EC:1.1.1.284 1.1.1.1]
128375191  alcohol dehydrogenase class-3 chain L [KO:K00121] [EC:1.1.1.284 1.1.1.1]
128364750  akr1a1a; aldo-keto reductase family 1 member A1-A [KO:K00002] [EC:1.1.1.2]
128361864  akr1a1b; aldo-keto reductase family 1 member A1-B [KO:K00002] [EC:1.1.1.2]
128371124  aldh3a2b; aldehyde dehydrogenase family 3 member A2b [KO:K00128] [EC:1.2.1.3]
128360808  aldehyde dehydrogenase, dimeric NADP-preferring-like [KO:K00128] [EC:1.2.1.3]
128360809  aldehyde dehydrogenase family 3 member A2-like [KO:K00128] [EC:1.2.1.3]
128367035  aldehyde dehydrogenase, mitochondrial-like [KO:K00128] [EC:1.2.1.3]
128378962  aldh16a1; aldehyde dehydrogenase family 16 member A1 [KO:K00128] [EC:1.2.1.3]
128361575  aldh7a1; alpha-aminoadipic semialdehyde dehydrogenase [KO:K14085] [EC:1.2.1.31 1.2.1.8 1.2.1.3]
128369091  aldh9a1b; 4-trimethylaminobutyraldehyde dehydrogenase B [KO:K00149] [EC:1.2.1.47 1.2.1.3]
128361753  aldh9a1a.1; 4-trimethylaminobutyraldehyde dehydrogenase A [KO:K00149] [EC:1.2.1.47 1.2.1.3]
128379492  aldh3b1; aldehyde dehydrogenase family 3 member B1 [KO:K00129] [EC:1.2.1.5]
128364661  aldh3b2; aldehyde dehydrogenase family 3 member B1 [KO:K00129] [EC:1.2.1.5]
128357721  acetyl-coenzyme A synthetase, cytoplasmic-like [KO:K01895] [EC:6.2.1.1]
128369232  acss2l; acyl-CoA synthetase short chain family member 2 like [KO:K01895] [EC:6.2.1.1]
128373218  acss1; acetyl-coenzyme A synthetase 2-like, mitochondrial [KO:K01895] [EC:6.2.1.1]
128372964  galm; aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
128368550  phosphoglucomutase-1-like [KO:K01835] [EC:5.4.2.2]
128361693  pgm1; phosphoglucomutase-1 [KO:K01835] [EC:5.4.2.2]
128374351  pgm2; phosphoglucomutase-2 [KO:K15779] [EC:5.4.2.2 5.4.2.7]
128368375  LOW QUALITY PROTEIN: glucose-6-phosphatase 2-like [KO:K01084] [EC:3.1.3.9]
128380887  g6pc3; glucose-6-phosphatase 3 [KO:K01084] [EC:3.1.3.9]
128381504  g6pc1a.2; glucose-6-phosphatase catalytic subunit 1 [KO:K01084] [EC:3.1.3.9]
128381507  g6pc1a.1; glucose-6-phosphatase a, catalytic subunit, tandem duplicate 1 [KO:K01084] [EC:3.1.3.9]
128378640  glucose-6-phosphatase catalytic subunit 1-like [KO:K01084] [EC:3.1.3.9]
128358517  adpgk; ADP-dependent glucokinase [KO:K08074] [EC:2.7.1.147]
128356796  adpgk2; ADP-dependent glucokinase [KO:K08074] [EC:2.7.1.147]
128358446  bpgm; bisphosphoglycerate mutase [KO:K01837] [EC:5.4.2.4 5.4.2.11]
128381591  minpp1b; multiple inositol polyphosphate phosphatase 1b isoform X1 [KO:K03103] [EC:3.1.3.62 3.1.3.80]
128373023  multiple inositol polyphosphate phosphatase 1-like [KO:K03103] [EC:3.1.3.62 3.1.3.80]
128373369  multiple inositol polyphosphate phosphatase 1-like [KO:K03103] [EC:3.1.3.62 3.1.3.80]
128382061  pck2; phosphoenolpyruvate carboxykinase [GTP], mitochondrial [KO:K01596] [EC:4.1.1.32]
128355701  pck1; phosphoenolpyruvate carboxykinase, cytosolic [GTP] [KO:K01596] [EC:4.1.1.32]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
sjo00020  Citrate cycle (TCA cycle)
sjo00030  Pentose phosphate pathway
sjo00500  Starch and sucrose metabolism
sjo00620  Pyruvate metabolism
sjo00640  Propanoate metabolism
KO pathway
ko00010   
LinkDB

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