KEGG   PATHWAY: spsw00230
Entry
spsw00230                   Pathway                                
Name
Purine metabolism - Shewanella psychrophila
Class
Metabolism; Nucleotide metabolism
Pathway map
spsw00230  Purine metabolism
spsw00230

Module
spsw_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:spsw00230]
spsw_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:spsw00230]
spsw_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:spsw00230]
spsw_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:spsw00230]
spsw_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:spsw00230]
spsw_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:spsw00230]
spsw_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:spsw00230]
Other DBs
GO: 0006163 0042278
Organism
Shewanella psychrophila [GN:spsw]
Gene
Sps_05106  protein containing C-terminal region of TrgB protein [KO:K01515] [EC:3.6.1.13 3.6.1.-]
Sps_05443  NUDIX family protein [KO:K08312] [EC:3.6.1.-]
Sps_04233  phosphopentomutase [KO:K01839] [EC:5.4.2.7]
Sps_00786  phosphoglucomutase, alpha-D-glucose phosphate-specific [KO:K01835] [EC:5.4.2.2]
Sps_04346  ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
Sps_01752  amidophosphoribosyltransferase [KO:K00764] [EC:2.4.2.14]
Sps_03176  phosphoribosylamine--glycine ligase [KO:K01945] [EC:6.3.4.13]
Sps_00498  phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent [KO:K11175] [EC:2.1.2.2]
Sps_03825  phosphoribosylformylglycinamidine synthase [KO:K01952] [EC:6.3.5.3]
Sps_00499  phosphoribosylformylglycinamidine cyclo-ligase [KO:K01933] [EC:6.3.3.1]
Sps_04061  phosphoribosylaminoimidazole carboxylase, PurE protein [KO:K01588] [EC:5.4.99.18]
Sps_01327  phosphoribosylaminoimidazole-succinocarboxamide synthase [KO:K01923] [EC:6.3.2.6]
Sps_00558  Adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
Sps_03175  IMP cyclohydrolase/phosphoribosylaminoimidazolecarboxamide formyltransferase [KO:K00602] [EC:2.1.2.3 3.5.4.10]
Sps_01672  adenine phosphoribosyltransferase [KO:K00759] [EC:2.4.2.7]
Sps_03841  5'-nucleotidase/2',3'-cyclic phosphodiesterase-like hydrolase [KO:K01081] [EC:3.1.3.5]
Sps_01411  5'-nucleotidase/2',3'-cyclic phosphodiesterase-like hydrolase [KO:K11751] [EC:3.1.3.5 3.6.1.45]
Sps_01412  5'-nucleotidase/2',3'-cyclic phosphodiesterase-like hydrolase [KO:K11751] [EC:3.1.3.5 3.6.1.45]
Sps_00027  putative acid phosphatase [KO:K03787] [EC:3.1.3.5 3.1.3.6]
Sps_04102  5'-nucleotidase [KO:K03787] [EC:3.1.3.5 3.1.3.6]
Sps_00482  putative sugar phosphatase of HAD superfamily [KO:K02566] [EC:3.1.3.5]
Sps_05444  haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED [KO:K20881] [EC:3.1.3.-]
Sps_01664  inosine-guanosine kinase [KO:K00892] [EC:2.7.1.73]
Sps_04232  purine-nucleoside phosphorylase [KO:K03784] [EC:2.4.2.1]
Sps_04145  purine-nucleoside phosphorylase [KO:K03784] [EC:2.4.2.1]
Sps_05238  hypothetical protein [KO:K09913] [EC:2.4.2.1 2.4.2.2]
Sps_04398  uncharacterized protein, YfiH family [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
Sps_04995  hypoxanthine phosphoribosyltransferase [KO:K00760] [EC:2.4.2.8]
Sps_03829  inosine-5'-monophosphate dehydrogenase [KO:K00088] [EC:1.1.1.205]
Sps_03585  nucleoside diphosphate kinase [KO:K00940] [EC:2.7.4.6]
Sps_02654  hypothetical protein [KO:K01529] [EC:3.6.1.73]
Sps_02344  non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family [KO:K01519] [EC:3.6.1.66]
Sps_01112  xanthine dehydrogenase, small subunit [KO:K13481] [EC:1.17.1.4]
Sps_01111  xanthine dehydrogenase, molybdenum binding subunit apoprotein [KO:K13482] [EC:1.17.1.4]
Sps_05252  GMP synthase family protein [KO:K01951] [EC:6.3.5.2]
Sps_03828  GMP synthase (glutamine-hydrolyzing) [KO:K01951] [EC:6.3.5.2]
Sps_01105  guanine deaminase [KO:K01487] [EC:3.5.4.3]
Sps_03316  guanylate kinase [KO:K00942] [EC:2.7.4.8]
Sps_00809  ribonucleoside-diphosphate reductase class Ia alpha subunit [KO:K00525] [EC:1.17.4.1]
Sps_00808  ribonucleoside-diphosphate reductase class Ia beta subunit [KO:K00526] [EC:1.17.4.1]
Sps_01818  ribonucleoside-triphosphate reductase class III catalytic subunit [KO:K21636] [EC:1.1.98.6]
Sps_00774  hypothetical protein [KO:K01129] [EC:3.1.5.1]
Sps_00775  hypothetical protein [KO:K01129] [EC:3.1.5.1]
Sps_00776  putative HD superfamily hydrolase [KO:K08722] [EC:3.1.3.89]
Sps_03318  (p)ppGpp synthetase, RelA/SpoT family [KO:K01139] [EC:2.7.6.5 3.1.7.2]
Sps_03067  Ppx/GppA phosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
Sps_04110  (p)ppGpp synthetase, RelA/SpoT family [KO:K00951] [EC:2.7.6.5]
Sps_04548  adenylate cyclase [KO:K01768] [EC:4.6.1.1]
Sps_02452  family 3 adenylate cyclase [KO:K01768] [EC:4.6.1.1]
Sps_03088  adenylate cyclase [KO:K05851] [EC:4.6.1.1]
Sps_03214  adenylyl cyclase CyaB, putative [KO:K05873] [EC:4.6.1.1]
Sps_05187  Adenylosuccinate synthetase [KO:K01939] [EC:6.3.4.4]
Sps_00867  Adenylosuccinate synthetase [KO:K01939] [EC:6.3.4.4]
Sps_04435  adenosine deaminase [KO:K01488] [EC:3.5.4.4]
Sps_02226  putative Rossmann fold nucleotide-binding protein [KO:K06966] [EC:3.2.2.10 3.2.2.-]
Sps_01486  5'-nucleotidase/2',3'-cyclic phosphodiesterase-like hydrolase [KO:K01119] [EC:3.1.4.16 3.1.3.6]
Sps_01666  Adenylate kinase [KO:K00939] [EC:2.7.4.3]
Sps_04109  MazG family protein [KO:K04765] [EC:3.6.1.9]
Sps_02669  Calcineurin-like phosphoesterase [KO:K03651] [EC:3.1.4.53]
Sps_05104  putative phosphohydrolase [KO:K03651] [EC:3.1.4.53]
Sps_04646  Bis(5'nucleosyl)-tetraphosphatase, ApaH [KO:K01525] [EC:3.6.1.41]
Sps_03699  adenylylsulfate kinase [KO:K00860] [EC:2.7.1.25]
Sps_03701  sulfate adenylyltransferase subunit 1 [KO:K00956] [EC:2.7.7.4]
Sps_03703  sulfate adenylyltransferase subunit 2 [KO:K00957] [EC:2.7.7.4]
Sps_01107  hydroxyisourate hydrolase [KO:K07127] [EC:3.5.2.17]
Sps_03948  OHCU decarboxylase [KO:K13485] [EC:4.1.1.97]
Sps_01108  OHCU decarboxylase [KO:K16840] [EC:4.1.1.97]
Sps_03949  putative urate catabolism protein [KO:K16842] [EC:3.5.2.5]
Sps_01109  allantoicase [KO:K01477] [EC:3.5.3.4]
Sps_01106  ureidoglycolate hydrolase [KO:K01483] [EC:4.3.2.3]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
spsw00030  Pentose phosphate pathway
spsw00220  Arginine biosynthesis
spsw00250  Alanine, aspartate and glutamate metabolism
spsw00260  Glycine, serine and threonine metabolism
spsw00340  Histidine metabolism
spsw00630  Glyoxylate and dicarboxylate metabolism
spsw00730  Thiamine metabolism
spsw00740  Riboflavin metabolism
spsw00790  Folate biosynthesis
KO pathway
ko00230   
LinkDB

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