KEGG   PATHWAY: sse00240
Entry
sse00240                    Pathway                                
Name
Pyrimidine metabolism - Shewanella sediminis
Class
Metabolism; Nucleotide metabolism
Pathway map
sse00240  Pyrimidine metabolism
sse00240

Module
sse_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:sse00240]
sse_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:sse00240]
sse_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:sse00240]
Other DBs
GO: 0006220 0006213
Organism
Shewanella sediminis [GN:sse]
Gene
Ssed_3403  carbamoyl-phosphate synthase, large subunit [KO:K01955] [EC:6.3.5.5]
Ssed_3404  carbamoyl-phosphate synthase, small subunit [KO:K01956] [EC:6.3.5.5]
Ssed_1089  Aspartate carbamoyltransferase [KO:K00609] [EC:2.1.3.2]
Ssed_3595  Dihydroorotase [KO:K01465] [EC:3.5.2.3]
Ssed_2475  Dihydroorotate oxidase [KO:K00254] [EC:1.3.5.2]
Ssed_0379  Orotate phosphoribosyltransferase [KO:K00762] [EC:2.4.2.10]
Ssed_2294  Orotidine-5'-phosphate decarboxylase [KO:K01591] [EC:4.1.1.23]
Ssed_3159  uridylate kinase [KO:K09903] [EC:2.7.4.22]
Ssed_2862  Nucleoside-diphosphate kinase [KO:K00940] [EC:2.7.4.6]
Ssed_1288  MazG family protein [KO:K04765] [EC:3.6.1.9]
Ssed_0561  maf protein [KO:K06287] [EC:3.6.1.-]
Ssed_1592  protein of unknown function DUF45 [KO:K07043] [EC:3.6.1.-]
Ssed_1289  CTP synthase [KO:K01937] [EC:6.3.4.2]
Ssed_2299  Cytidylate kinase [KO:K00945] [EC:2.7.4.25]
Ssed_2651  uridine kinase [KO:K00876] [EC:2.7.1.48]
Ssed_1427  5'-nucleotidase [KO:K01081] [EC:3.1.3.5]
Ssed_2772  putative 5'-nucleotidase [KO:K01081] [EC:3.1.3.5]
Ssed_2669  5'-nucleotidase domain protein [KO:K11751] [EC:3.1.3.5 3.6.1.45]
Ssed_1926  5'-nucleotidase [KO:K11751] [EC:3.1.3.5 3.6.1.45]
Ssed_1295  3'-nucleotidase [KO:K03787] [EC:3.1.3.5 3.1.3.6]
Ssed_1840  HAD-superfamily hydrolase, subfamily IIA [KO:K02566] [EC:3.1.3.5]
Ssed_2354  HAD-superfamily hydrolase, subfamily IA, variant 1 [KO:K08723] [EC:3.1.3.-]
Ssed_3654  uridine phosphorylase [KO:K00757] [EC:2.4.2.3]
Ssed_2504  uridine phosphorylase [KO:K00757] [EC:2.4.2.3]
Ssed_0461  uridine phosphorylase [KO:K00757] [EC:2.4.2.3]
Ssed_1846  Uracil phosphoribosyltransferase [KO:K00761] [EC:2.4.2.9]
Ssed_2694  phosphatase/nucleotidase [KO:K01119] [EC:3.1.4.16 3.1.3.6]
Ssed_1351  PfkB domain protein [KO:K16328] [EC:2.7.1.83]
Ssed_1352  indigoidine synthase A family protein [KO:K16329] [EC:4.2.1.70]
Ssed_1049  Purine nucleosidase [KO:K01250] [EC:3.2.2.-]
Ssed_3310  conserved hypothetical protein [KO:K06966] [EC:3.2.2.10 3.2.2.-]
Ssed_2618  Cytidine deaminase [KO:K01489] [EC:3.5.4.5]
Ssed_2803  N-isopropylammelide isopropylaminohydrolase [KO:K01485] [EC:3.5.4.1 3.5.4.21]
Ssed_1600  Ribonucleoside-triphosphate reductase [KO:K21636] [EC:1.1.98.6]
Ssed_2804  anaerobic ribonucleoside triphosphate reductase [KO:K21636] [EC:1.1.98.6]
Ssed_2306  Ribonucleoside-diphosphate reductase [KO:K00525] [EC:1.17.4.1]
Ssed_2307  Ribonucleoside-diphosphate reductase [KO:K00526] [EC:1.17.4.1]
Ssed_2345  5'-nucleotidase [KO:K08722] [EC:3.1.3.89]
Ssed_3657  CMP/dCMP deaminase, zinc-binding [KO:K01493] [EC:3.5.4.12]
Ssed_2648  dTMP kinase [KO:K00943] [EC:2.7.4.9]
Ssed_0383  dUTP diphosphatase [KO:K01520] [EC:3.6.1.23]
Ssed_3377  Thymidine phosphorylase [KO:K00758] [EC:2.4.2.4]
Ssed_1449  Thymidine kinase [KO:K00857] [EC:2.7.1.21]
Ssed_1135  Thymidylate synthase [KO:K00560] [EC:2.1.1.45]
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C00941  3',5'-Cyclic CMP
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
C22509  3',5'-Cyclic UMP
Related
pathway
sse00030  Pentose phosphate pathway
sse00220  Arginine biosynthesis
sse00250  Alanine, aspartate and glutamate metabolism
sse00280  Valine, leucine and isoleucine degradation
sse00410  beta-Alanine metabolism
KO pathway
ko00240   
LinkDB

DBGET integrated database retrieval system