KEGG   PATHWAY: szo00230
Entry
szo00230                    Pathway                                
Name
Purine metabolism - Shinella zoogloeoides
Class
Metabolism; Nucleotide metabolism
Pathway map
szo00230  Purine metabolism
szo00230

Module
szo_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:szo00230]
szo_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:szo00230]
szo_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:szo00230]
szo_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:szo00230]
szo_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:szo00230]
szo_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:szo00230]
szo_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:szo00230]
Other DBs
GO: 0006163 0042278
Organism
Shinella zoogloeoides [GN:szo]
Gene
K8M09_18995  phosphopentomutase [KO:K01839] [EC:5.4.2.7]
K8M09_13920  alpha-D-glucose phosphate-specific phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
K8M09_11525  ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
K8M09_05225  purF; amidophosphoribosyltransferase [KO:K00764] [EC:2.4.2.14]
K8M09_14245  purD; phosphoribosylamine--glycine ligase [KO:K01945] [EC:6.3.4.13]
K8M09_04180  purN; phosphoribosylglycinamide formyltransferase [KO:K11175] [EC:2.1.2.2]
K8M09_08865  purL; phosphoribosylformylglycinamidine synthase subunit PurL [KO:K23269] [EC:6.3.5.3]
K8M09_08835  purS; phosphoribosylformylglycinamidine synthase subunit PurS [KO:K23264] [EC:6.3.5.3]
K8M09_08845  purQ; phosphoribosylformylglycinamidine synthase subunit PurQ [KO:K23265] [EC:6.3.5.3 3.5.1.2]
K8M09_04185  purM; phosphoribosylformylglycinamidine cyclo-ligase [KO:K01933] [EC:6.3.3.1]
K8M09_13650  5-(carboxyamino)imidazole ribonucleotide synthase [KO:K01589] [EC:6.3.4.18]
K8M09_13645  purE; 5-(carboxyamino)imidazole ribonucleotide mutase [KO:K01588] [EC:5.4.99.18]
K8M09_08155  phosphoribosylaminoimidazolesuccinocarboxamide synthase [KO:K01923] [EC:6.3.2.6]
K8M09_08830  phosphoribosylaminoimidazolesuccinocarboxamide synthase [KO:K01923] [EC:6.3.2.6]
K8M09_08805  purB; adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
K8M09_17215  purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase [KO:K00602] [EC:2.1.2.3 3.5.4.10]
K8M09_11585  adenine phosphoribosyltransferase [KO:K00759] [EC:2.4.2.7]
K8M09_13730  5'-nucleotidase C-terminal domain-containing protein [KO:K11751] [EC:3.1.3.5 3.6.1.45]
K8M09_07140  surE; 5'/3'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
K8M09_18965  purine-nucleoside phosphorylase [KO:K03783] [EC:2.4.2.1]
K8M09_11510  pgeF; peptidoglycan editing factor PgeF [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
K8M09_15405  hpt; hypoxanthine phosphoribosyltransferase [KO:K00760] [EC:2.4.2.8]
K8M09_03105  guaB; IMP dehydrogenase [KO:K00088] [EC:1.1.1.205]
K8M09_05430  ndk; nucleoside-diphosphate kinase [KO:K00940] [EC:2.7.4.6]
K8M09_00020  rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase [KO:K01519] [EC:3.6.1.66]
K8M09_06890  gpt; xanthine phosphoribosyltransferase [KO:K00769] [EC:2.4.2.22]
K8M09_22155  xanthine dehydrogenase family protein molybdopterin-binding subunit [KO:K00087] [EC:1.17.1.4]
K8M09_18180  xdhA; xanthine dehydrogenase small subunit [KO:K13481] [EC:1.17.1.4]
K8M09_18185  xdhB; xanthine dehydrogenase molybdopterin binding subunit [KO:K13482] [EC:1.17.1.4]
K8M09_15970  glutamine amidotransferase [KO:K01951] [EC:6.3.5.2]
K8M09_19425  guaA; glutamine-hydrolyzing GMP synthase [KO:K01951] [EC:6.3.5.2]
K8M09_18215  guaD; guanine deaminase [KO:K01487] [EC:3.5.4.3]
K8M09_05335  gmk; guanylate kinase [KO:K00942] [EC:2.7.4.8]
K8M09_20520  nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
K8M09_20905  nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
K8M09_20525  nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
K8M09_20910  nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
K8M09_21980  ribonucleoside triphosphate reductase [KO:K21636] [EC:1.1.98.6]
K8M09_07085  deoxyguanosinetriphosphate triphosphohydrolase [KO:K01129] [EC:3.1.5.1]
K8M09_13110  dgt; dNTP triphosphohydrolase [KO:K01129] [EC:3.1.5.1]
K8M09_05100  HD family hydrolase [KO:K06952] [EC:3.1.3.89]
K8M09_04960  bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [KO:K01139] [EC:2.7.6.5 3.1.7.2]
K8M09_03080  Ppx/GppA family phosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
K8M09_04205  ppx; exopolyphosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
K8M09_00625  adenylate/guanylate cyclase domain-containing protein [KO:K01768] [EC:4.6.1.1]
K8M09_13385  adenylosuccinate synthase [KO:K01939] [EC:6.3.4.4]
K8M09_18990  adenosine deaminase [KO:K01488] [EC:3.5.4.4]
K8M09_04810  AMP nucleosidase [KO:K01241] [EC:3.2.2.4]
K8M09_11865  ade; adenine deaminase [KO:K01486] [EC:3.5.4.2]
K8M09_19850  amidohydrolase family protein [KO:K01486] [EC:3.5.4.2]
K8M09_20485  amidohydrolase family protein [KO:K01486] [EC:3.5.4.2]
K8M09_13510  YmdB family metallophosphoesterase [KO:K09769] [EC:3.1.4.16]
K8M09_06815  adenylate kinase [KO:K00939] [EC:2.7.4.3]
K8M09_07755  mazG; nucleoside triphosphate pyrophosphohydrolase [KO:K04765] [EC:3.6.1.9]
K8M09_00605  phosphodiesterase [KO:K03651] [EC:3.1.4.53]
K8M09_03995  cysN; sulfate adenylyltransferase subunit CysN [KO:K00956] [EC:2.7.7.4]
K8M09_04000  cysD; sulfate adenylyltransferase subunit CysD [KO:K00957] [EC:2.7.7.4]
K8M09_18175  uraH; hydroxyisourate hydrolase [KO:K07127] [EC:3.5.2.17]
K8M09_20560  aspartate/glutamate racemase family protein [KO:K16841] [EC:5.1.99.3]
K8M09_10800  amidohydrolase family protein [KO:K01466] [EC:3.5.2.5]
K8M09_11985  puuE; allantoinase PuuE [KO:K16842] [EC:3.5.2.5]
K8M09_18170  puuE; allantoinase PuuE [KO:K16842] [EC:3.5.2.5]
K8M09_14545  (S)-ureidoglycine aminohydrolase [KO:K14977] [EC:3.5.3.26]
K8M09_11975  ureidoglycolate lyase [KO:K01483] [EC:4.3.2.3]
K8M09_18165  ureidoglycolate lyase [KO:K01483] [EC:4.3.2.3]
K8M09_02680  arcC; carbamate kinase [KO:K00926] [EC:2.7.2.2]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
szo00030  Pentose phosphate pathway
szo00220  Arginine biosynthesis
szo00250  Alanine, aspartate and glutamate metabolism
szo00260  Glycine, serine and threonine metabolism
szo00340  Histidine metabolism
szo00630  Glyoxylate and dicarboxylate metabolism
szo00730  Thiamine metabolism
szo00740  Riboflavin metabolism
szo00790  Folate biosynthesis
KO pathway
ko00230   
LinkDB

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