KEGG   PATHWAY: tben00250
Entry
tben00250                   Pathway                                
Name
Alanine, aspartate and glutamate metabolism - Trematomus bernacchii (emerald rockcod)
Class
Metabolism; Amino acid metabolism
Pathway map
tben00250  Alanine, aspartate and glutamate metabolism
tben00250

Module
tben_M00027  GABA (gamma-Aminobutyrate) shunt [PATH:tben00250]
Other DBs
GO: 0006522 0006531 0006536
Organism
Trematomus bernacchii (emerald rockcod) [GN:tben]
Gene
117496886  got1l1; putative aspartate aminotransferase, cytoplasmic 2 [KO:K14454] [EC:2.6.1.1]
117482080  aspartate aminotransferase, cytoplasmic-like [KO:K14454] [EC:2.6.1.1]
117499511  got1; LOW QUALITY PROTEIN: aspartate aminotransferase, cytoplasmic [KO:K14454] [EC:2.6.1.1]
117471494  got2b; glutamic-oxaloacetic transaminase 2b, mitochondrial [KO:K14455] [EC:2.6.1.1]
117486838  L-amino-acid oxidase-like [KO:K03334] [EC:1.4.3.2]
117468930  il4i1; L-amino-acid oxidase [KO:K03334] [EC:1.4.3.2]
117469869  L-amino-acid oxidase-like isoform X1 [KO:K03334] [EC:1.4.3.2]
117497100  ddo; D-aspartate oxidase [KO:K00272] [EC:1.4.3.1]
117475355  asrgl1; isoaspartyl peptidase/L-asparaginase isoform X1 [KO:K13051] [EC:3.5.1.1 3.4.19.5]
117499716  isoaspartyl peptidase/L-asparaginase-like [KO:K13051] [EC:3.5.1.1 3.4.19.5]
117499718  isoaspartyl peptidase/L-asparaginase-like [KO:K13051] [EC:3.5.1.1 3.4.19.5]
117482814  asns; asparagine synthetase [glutamine-hydrolyzing] [KO:K01953] [EC:6.3.5.4]
117496019  nit2; omega-amidase NIT2 [KO:K13566] [EC:3.5.1.3]
117484015  si:ch211-217a12.1; alanine aminotransferase 2-like [KO:K00814] [EC:2.6.1.2]
117479888  gpt2; alanine aminotransferase 2 [KO:K00814] [EC:2.6.1.2]
117488287  gpt2l; alanine aminotransferase 2-like isoform X1 [KO:K00814] [EC:2.6.1.2]
117488297  alanine aminotransferase 2-like [KO:K00814] [EC:2.6.1.2]
117495136  alanine aminotransferase 2-like [KO:K00814] [EC:2.6.1.2]
117495246  alanine aminotransferase 2-like [KO:K00814] [EC:2.6.1.2]
117495247  LOW QUALITY PROTEIN: alanine aminotransferase 2-like [KO:K00814] [EC:2.6.1.2]
117491040  agxta; alanine--glyoxylate and serine--pyruvate aminotransferase a isoform X1 [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
117488501  agxtb; alanine--glyoxylate and serine--pyruvate aminotransferase b [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
117476341  agxt2; alanine--glyoxylate aminotransferase 2, mitochondrial [KO:K00827] [EC:2.6.1.44 2.6.1.40]
117476344  alanine--glyoxylate aminotransferase 2, mitochondrial-like [KO:K00827] [EC:2.6.1.44 2.6.1.40]
117476693  ass1; argininosuccinate synthase [KO:K01940] [EC:6.3.4.5]
117490210  asl; argininosuccinate lyase isoform X1 [KO:K01755] [EC:4.3.2.1]
117499750  adss2; adenylosuccinate synthetase isozyme 2 [KO:K01939] [EC:6.3.4.4]
117499752  adssl; LOW QUALITY PROTEIN: adenylosuccinate synthase, like [KO:K01939] [EC:6.3.4.4]
117477281  adss1; adenylosuccinate synthetase isozyme 1 [KO:K01939] [EC:6.3.4.4]
117493126  adsl; adenylosuccinate lyase isoform X1 [KO:K01756] [EC:4.3.2.2]
117498120  nat8l; N-acetylaspartate synthetase [KO:K18309] [EC:2.3.1.17]
117494141  rimkla; LOW QUALITY PROTEIN: beta-citrylglutamate synthase B [KO:K18310] [EC:6.3.1.17 6.3.2.41]
117473183  zgc:163121; glutamate decarboxylase 1 isoform X1 [KO:K01580] [EC:4.1.1.15]
117479924  glutamate decarboxylase 1-like [KO:K01580] [EC:4.1.1.15]
117497592  gad2; glutamate decarboxylase 2 [KO:K01580] [EC:4.1.1.15]
117481019  glutamate decarboxylase 1 isoform X1 [KO:K01580] [EC:4.1.1.15]
117488989  glutamate decarboxylase 1-like isoform X1 [KO:K01580] [EC:4.1.1.15]
117469235  abat; LOW QUALITY PROTEIN: 4-aminobutyrate aminotransferase, mitochondrial [KO:K13524] [EC:2.6.1.19 2.6.1.22]
117476193  aldh5a1; succinate-semialdehyde dehydrogenase, mitochondrial [KO:K00139] [EC:1.2.1.24]
117473510  glutamate dehydrogenase, mitochondrial [KO:K00261] [EC:1.4.1.3]
117494675  glud1a; LOW QUALITY PROTEIN: glutamate dehydrogenase 1a [KO:K00261] [EC:1.4.1.3]
117482494  aldh4a1; delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial [KO:K00294] [EC:1.2.1.88]
117479007  glutamine synthetase-like [KO:K01915] [EC:6.3.1.2]
117490996  glulb; glutamine synthetase [KO:K01915] [EC:6.3.1.2]
117488674  glula; glutamate-ammonia ligase (glutamine synthase) a [KO:K01915] [EC:6.3.1.2]
117475139  cad; CAD protein [KO:K11540] [EC:6.3.5.5 2.1.3.2 3.5.2.3]
117489939  gls2b; glutaminase 2b [KO:K01425] [EC:3.5.1.2]
117479535  glutaminase liver isoform, mitochondrial-like [KO:K01425] [EC:3.5.1.2]
117485959  glsb; glutaminase kidney isoform, mitochondrial isoform X1 [KO:K01425] [EC:3.5.1.2]
117498893  glutaminase kidney isoform, mitochondrial-like isoform X1 [KO:K01425] [EC:3.5.1.2]
117485740  cps1; carbamoyl-phosphate synthase [ammonia], mitochondrial [KO:K01948] [EC:6.3.4.16]
117496878  glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 [KO:K00820] [EC:2.6.1.16]
117471168  gfpt2; LOW QUALITY PROTEIN: glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2 [KO:K00820] [EC:2.6.1.16]
117495071  ppat; amidophosphoribosyltransferase [KO:K00764] [EC:2.4.2.14]
Compound
C00014  Ammonia
C00022  Pyruvate
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00036  Oxaloacetate
C00041  L-Alanine
C00042  Succinate
C00049  L-Aspartate
C00064  L-Glutamine
C00122  Fumarate
C00152  L-Asparagine
C00158  Citrate
C00169  Carbamoyl phosphate
C00232  Succinate semialdehyde
C00334  4-Aminobutanoate
C00352  D-Glucosamine 6-phosphate
C00402  D-Aspartate
C00438  N-Carbamoyl-L-aspartate
C00940  2-Oxoglutaramate
C01042  N-Acetyl-L-aspartate
C02362  2-Oxosuccinamate
C03090  5-Phosphoribosylamine
C03406  N-(L-Arginino)succinate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03912  (S)-1-Pyrroline-5-carboxylate
C12270  N-Acetylaspartylglutamate
C20775  beta-Citryl-L-glutamate
C20776  N-Acetylaspartylglutamylglutamate
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
PMID:9687539
  Authors
Wu G
  Title
Intestinal mucosal amino acid catabolism.
  Journal
J Nutr 128:1249-52 (1998)
DOI:10.1093/jn/128.8.1249
Related
pathway
tben00010  Glycolysis / Gluconeogenesis
tben00020  Citrate cycle (TCA cycle)
tben00220  Arginine biosynthesis
tben00230  Purine metabolism
tben00240  Pyrimidine metabolism
tben00260  Glycine, serine and threonine metabolism
tben00330  Arginine and proline metabolism
tben00340  Histidine metabolism
tben00410  beta-Alanine metabolism
tben00470  D-Amino acid metabolism
tben00480  Glutathione metabolism
tben00520  Amino sugar and nucleotide sugar metabolism
tben00620  Pyruvate metabolism
tben00630  Glyoxylate and dicarboxylate metabolism
tben00650  Butanoate metabolism
tben00760  Nicotinate and nicotinamide metabolism
tben00770  Pantothenate and CoA biosynthesis
tben00860  Porphyrin metabolism
tben00910  Nitrogen metabolism
KO pathway
ko00250   
LinkDB

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