KEGG   PATHWAY: tsi00010
Entry
tsi00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Thermococcus sibiricus
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
tsi00010  Glycolysis / Gluconeogenesis
tsi00010

Module
tsi_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:tsi00010]
tsi_M00002  Glycolysis, core module involving three-carbon compounds [PATH:tsi00010]
tsi_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:tsi00010]
tsi_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:tsi00010]
Other DBs
GO: 0006096 0006094
Organism
Thermococcus sibiricus [GN:tsi]
Gene
TSIB_0813  phosphoglucose isomerase (PGI) [KO:K06859] [EC:5.3.1.9]
TSIB_0252  ADP-dependent glucokinase (GLK) [KO:K00918] [EC:2.7.1.146 2.7.1.147]
TSIB_1220  ADP-dependent 6-phosphofructokinase (PFK) [KO:K00918] [EC:2.7.1.146 2.7.1.147]
TSIB_0230  fructose-1,6-bisphosphate aldolase (FBA) [KO:K11645] [EC:4.1.2.13]
TSIB_1687  fructose-1,6-bisphosphatase (FBP) [KO:K01622] [EC:4.1.2.13 3.1.3.11]
TSIB_1685  Triosephosphate isomerase (TIM) [KO:K01803] [EC:5.3.1.1]
TSIB_0949  glyceraldehyde-3-phosphate dehydrogenase (GAPDH) [KO:K00150] [EC:1.2.1.59]
TSIB_0215  3-phosphoglycerate kinase (PGK) [KO:K00927] [EC:2.7.2.3]
TSIB_1580  2-Phosphoglycerate mutase (PGM) [KO:K15635] [EC:5.4.2.12]
TSIB_0348  Enolase [KO:K01689] [EC:4.2.1.11]
TSIB_0792  Enolase [KO:K01689] [EC:4.2.1.11]
TSIB_0471  Pyruvate kinase (PYK) [KO:K00873] [EC:2.7.1.40]
TSIB_0271  Phosphoenolpyruvate synthetase [KO:K01007] [EC:2.7.9.2]
TSIB_1623  phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
TSIB_1379  Pyruvate:ferredoxin oxidoreductase (POR), subunit alpha [KO:K00169] [EC:1.2.7.1]
TSIB_1378  Pyruvate:ferredoxin oxidoreductase (POR), subunit beta [KO:K00170] [EC:1.2.7.1]
TSIB_1384  pyruvate:ferredoxin oxidoreductase (POR) and 2-ketoisovalerate:ferredoxin oxidoreductase (VOR) subunit gamma [KO:K00189] [EC:1.2.7.7 1.2.7.1]
TSIB_1380  Pyruvate:ferredoxin oxidoreductase (POR), subunit delta [KO:K00171] [EC:1.2.7.1]
TSIB_1468  2-ketoglutarate:ferredoxin oxidoreductase 2 (KGOR), subunit alpha [KO:K00174] [EC:1.2.7.3 1.2.7.11]
TSIB_1471  2-ketoglutarate:ferredoxin oxidoreductase (KGOR), subunit alpha [KO:K00174] [EC:1.2.7.3 1.2.7.11]
TSIB_1902  2-oxoacid:ferredoxin oxidoreductase, subunit alpha [KO:K00174] [EC:1.2.7.3 1.2.7.11]
TSIB_1467  2-ketoglutarate ferredoxin oxidoreductase 2 (KGOR), subunit beta [KO:K00175] [EC:1.2.7.3 1.2.7.11]
TSIB_1470  2-ketoglutarate:ferredoxin oxidoreductase (KGOR), subunit beta [KO:K00175] [EC:1.2.7.3 1.2.7.11]
TSIB_1901  2-oxoacid:ferredoxin oxidoreductase, subunit beta [KO:K00175] [EC:1.2.7.3 1.2.7.11]
TSIB_0529  Acetyl-CoA synthetase I (ACSI, ADP-forming), subunit alpha [KO:K01905] [EC:6.2.1.13]
TSIB_0147  Acetyl-CoA synthetase II (ACSII, ADP-forming), subunit alpha [KO:K01905] [EC:6.2.1.13]
TSIB_0207  Acyl-CoA synthetase, subunit alpha [KO:K01905] [EC:6.2.1.13]
TSIB_1965  Succinyl-coa synthetase alpha subunit related protein [KO:K01905] [EC:6.2.1.13]
TSIB_0206  Acetyl-CoA synthetase II (ACSII, ADP-forming) and succinyl-CoA synthetase (SCS, ADP-forming), subunit beta [KO:K22224] [EC:6.2.1.13]
TSIB_1099  Acetyl-CoA synthetase I (ACSI, ADP-forming), subunit beta [KO:K22224] [EC:6.2.1.13]
TSIB_0248  Phosphoglucomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
TSIB_1686  Glyceraldehyde-3-phosphate:ferredoxin oxidoreductase (GAPOR) [KO:K11389] [EC:1.2.7.6]
TSIB_1868  non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase (GAPN) [KO:K18978] [EC:1.2.1.90]
TSIB_0151  phosphoenolpyruvate carboxykinase [KO:K01596] [EC:4.1.1.32]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
tsi00020  Citrate cycle (TCA cycle)
tsi00030  Pentose phosphate pathway
tsi00500  Starch and sucrose metabolism
tsi00620  Pyruvate metabolism
tsi00640  Propanoate metabolism
tsi00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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