KEGG   PATHWAY: vpd00250
Entry
vpd00250                    Pathway                                
Name
Alanine, aspartate and glutamate metabolism - Variovorax paradoxus B4
Class
Metabolism; Amino acid metabolism
Pathway map
vpd00250  Alanine, aspartate and glutamate metabolism
vpd00250

Other DBs
GO: 0006522 0006531 0006536
Organism
Variovorax paradoxus B4 [GN:vpd]
Gene
VAPA_1c03770  aat1; aspartate aminotransferase Aat [KO:K00812] [EC:2.6.1.1]
VAPA_2c07380  putative aspartate aminotransferase [KO:K00812] [EC:2.6.1.1]
VAPA_2c11760  palB; putative aminotransferase PalB [KO:K00812] [EC:2.6.1.1]
VAPA_1c42470  nadB; L-aspartate oxidase NadB [KO:K00278] [EC:1.4.3.16]
VAPA_1c16420  putative aspartate racemase [KO:K01779] [EC:5.1.1.13]
VAPA_1c39060  putative aspartate racemase [KO:K01779] [EC:5.1.1.13]
VAPA_1c29150  putative aspagarinase [KO:K01424] [EC:3.5.1.1]
VAPA_1c25570  putative isoaspartyl peptidase [KO:K13051] [EC:3.5.1.1 3.4.19.5]
VAPA_1c49020  ansB; glutaminase-asparaginase AnsB [KO:K05597] [EC:3.5.1.38]
VAPA_1c19150  alaA; glutamat-pyruvat aminotransferase AlaA [KO:K14260] [EC:2.6.1.66 2.6.1.2]
VAPA_1c26480  putative aminotransferase, class 5 [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
VAPA_1c08870  aspA; aspartate ammonia-lyase AspA [KO:K01744] [EC:4.3.1.1]
VAPA_1c38960  argG; argininosuccinate synthase ArgG [KO:K01940] [EC:6.3.4.5]
VAPA_1c07110  putative argininosuccinate lyase [KO:K01755] [EC:4.3.2.1]
VAPA_1c14530  argH; argininosuccinate lyase ArgH [KO:K01755] [EC:4.3.2.1]
VAPA_1c23780  purA; adenylosuccinate synthetase PurA [KO:K01939] [EC:6.3.4.4]
VAPA_1c53580  purB; adenylosuccinate lyase PurB [KO:K01756] [EC:4.3.2.2]
VAPA_2c11090  purB; adenylosuccinate lyase PurB [KO:K01756] [EC:4.3.2.2]
VAPA_2c05490  putative aspartate carbamoyltransferase [KO:K00609] [EC:2.1.3.2]
VAPA_1c47550  pyrB; aspartate carbamoyltransferase PyrB [KO:K00609] [EC:2.1.3.2]
VAPA_1c54400  aminotransferase, class 3 [KO:K16871] [EC:2.6.1.96]
VAPA_1c22520  gabD2; succinate-semialdehyde dehydrogenase NADP+ [KO:K00135] [EC:1.2.1.16 1.2.1.79 1.2.1.20]
VAPA_1c20840  gabD1; succinate-semialdehyde dehydrogenase GabD [KO:K00135] [EC:1.2.1.16 1.2.1.79 1.2.1.20]
VAPA_1c48550  gabD3; succinate-semialdehyde dehydrogenase NADP+ [KO:K00135] [EC:1.2.1.16 1.2.1.79 1.2.1.20]
VAPA_1c40430  succinate-semialdehyde dehydrogenase [KO:K00135] [EC:1.2.1.16 1.2.1.79 1.2.1.20]
VAPA_2c02560  gabD; succinate-semialdehyde dehydrogenase NADP+ [KO:K00135] [EC:1.2.1.16 1.2.1.79 1.2.1.20]
VAPA_1c12110  NADH/NADPH-dependent glutamate synthase, large chain [KO:K00265] [EC:1.4.1.13]
VAPA_1c12120  glutamate synthase [NADPH], small chain [KO:K00266] [EC:1.4.1.13]
VAPA_1c49740  gdhA; glutamate dehydrogenase GdhA [KO:K00261] [EC:1.4.1.3]
VAPA_1c49770  putA; bifunctional protein PutA [KO:K13821] [EC:1.5.5.2 1.2.1.88]
VAPA_1c01730  putative glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
VAPA_1c17380  glnA; glutamate-ammonia ligase GlnA [KO:K01915] [EC:6.3.1.2]
VAPA_1c29350  carB; carbamoyl-phosphate synthase, large chain CarB [KO:K01955] [EC:6.3.5.5]
VAPA_1c29370  carA; carbamoyl-phosphate synthase, small chain CarA [KO:K01956] [EC:6.3.5.5]
VAPA_1c01600  glutaminase [KO:K01425] [EC:3.5.1.2]
VAPA_1c10600  glmS; glucosamine--fructose-6-phosphate aminotransferase GlmS [KO:K00820] [EC:2.6.1.16]
VAPA_1c38890  purF; amidophosphoribosyltransferase PurF [KO:K00764] [EC:2.4.2.14]
Compound
C00014  Ammonia
C00022  Pyruvate
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00036  Oxaloacetate
C00041  L-Alanine
C00042  Succinate
C00049  L-Aspartate
C00064  L-Glutamine
C00122  Fumarate
C00152  L-Asparagine
C00158  Citrate
C00169  Carbamoyl phosphate
C00232  Succinate semialdehyde
C00334  4-Aminobutanoate
C00352  D-Glucosamine 6-phosphate
C00402  D-Aspartate
C00438  N-Carbamoyl-L-aspartate
C00940  2-Oxoglutaramate
C01042  N-Acetyl-L-aspartate
C02362  2-Oxosuccinamate
C03090  5-Phosphoribosylamine
C03406  N-(L-Arginino)succinate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03912  (S)-1-Pyrroline-5-carboxylate
C12270  N-Acetylaspartylglutamate
C20775  beta-Citryl-L-glutamate
C20776  N-Acetylaspartylglutamylglutamate
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
PMID:9687539
  Authors
Wu G
  Title
Intestinal mucosal amino acid catabolism.
  Journal
J Nutr 128:1249-52 (1998)
DOI:10.1093/jn/128.8.1249
Related
pathway
vpd00010  Glycolysis / Gluconeogenesis
vpd00020  Citrate cycle (TCA cycle)
vpd00220  Arginine biosynthesis
vpd00230  Purine metabolism
vpd00240  Pyrimidine metabolism
vpd00260  Glycine, serine and threonine metabolism
vpd00261  Monobactam biosynthesis
vpd00300  Lysine biosynthesis
vpd00330  Arginine and proline metabolism
vpd00340  Histidine metabolism
vpd00410  beta-Alanine metabolism
vpd00460  Cyanoamino acid metabolism
vpd00470  D-Amino acid metabolism
vpd00480  Glutathione metabolism
vpd00520  Amino sugar and nucleotide sugar metabolism
vpd00620  Pyruvate metabolism
vpd00630  Glyoxylate and dicarboxylate metabolism
vpd00650  Butanoate metabolism
vpd00660  C5-Branched dibasic acid metabolism
vpd00760  Nicotinate and nicotinamide metabolism
vpd00770  Pantothenate and CoA biosynthesis
vpd00860  Porphyrin metabolism
vpd00910  Nitrogen metabolism
KO pathway
ko00250   
LinkDB

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