KEGG   PATHWAY: yca00230
Entry
yca00230                    Pathway                                
Name
Purine metabolism - Yersinia canariae
Class
Metabolism; Nucleotide metabolism
Pathway map
yca00230  Purine metabolism
yca00230

Module
yca_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:yca00230]
yca_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:yca00230]
yca_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:yca00230]
yca_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:yca00230]
yca_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:yca00230]
Other DBs
GO: 0006163 0042278
Organism
Yersinia canariae [GN:yca]
Gene
F0T03_18745  ADP-ribose diphosphatase [KO:K01515] [EC:3.6.1.13 3.6.1.-]
F0T03_20730  nudE; ADP compounds hydrolase NudE [KO:K08312] [EC:3.6.1.-]
F0T03_16145  phosphopentomutase [KO:K01839] [EC:5.4.2.7]
F0T03_03485  deoB; phosphopentomutase [KO:K01839] [EC:5.4.2.7]
F0T03_15470  alpha-D-glucose phosphate-specific phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
F0T03_11955  ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
F0T03_07530  purF; amidophosphoribosyltransferase [KO:K00764] [EC:2.4.2.14]
F0T03_20050  purD; phosphoribosylamine--glycine ligase [KO:K01945] [EC:6.3.4.13]
F0T03_06075  purN; phosphoribosylglycinamide formyltransferase [KO:K11175] [EC:2.1.2.2]
F0T03_09560  purT; formate-dependent phosphoribosylglycinamide formyltransferase [KO:K08289] [EC:6.3.1.21]
F0T03_05625  purL; phosphoribosylformylglycinamidine synthase [KO:K01952] [EC:6.3.5.3]
F0T03_06080  purM; phosphoribosylformylglycinamidine cyclo-ligase [KO:K01933] [EC:6.3.3.1]
F0T03_15880  purK; 5-(carboxyamino)imidazole ribonucleotide synthase [KO:K01589] [EC:6.3.4.18]
F0T03_15875  purE; 5-(carboxyamino)imidazole ribonucleotide mutase [KO:K01588] [EC:5.4.99.18]
F0T03_06135  purC; phosphoribosylaminoimidazolesuccinocarboxamide synthase [KO:K01923] [EC:6.3.2.6]
F0T03_09175  purB; adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
F0T03_20045  purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase [KO:K00602] [EC:2.1.2.3 3.5.4.10]
F0T03_16090  adenine phosphoribosyltransferase [KO:K00759] [EC:2.4.2.7]
F0T03_15990  bifunctional UDP-sugar hydrolase/5'-nucleotidase [KO:K11751] [EC:3.1.3.5 3.6.1.45]
F0T03_04420  surE; 5'/3'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
F0T03_15545  HAD-IIA family hydrolase [KO:K02566] [EC:3.1.3.5]
F0T03_20740  GMP/IMP nucleotidase [KO:K20881] [EC:3.1.3.-]
F0T03_16010  inosine/guanosine kinase [KO:K00892] [EC:2.7.1.73]
F0T03_03490  deoD; purine-nucleoside phosphorylase [KO:K03784] [EC:2.4.2.1]
F0T03_16520  ppnP; pyrimidine/purine nucleoside phosphorylase [KO:K09913] [EC:2.4.2.1 2.4.2.2]
F0T03_05045  pgeF; polyphenol oxidase [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
F0T03_04150  hypoxanthine phosphoribosyltransferase [KO:K00760] [EC:2.4.2.8]
F0T03_05870  guaB; IMP dehydrogenase [KO:K00088] [EC:1.1.1.205]
F0T03_05805  nucleoside-diphosphate kinase [KO:K00940] [EC:2.7.4.6]
F0T03_03560  yjjX; non-canonical purine NTP phosphatase [KO:K01529] [EC:3.6.1.73]
F0T03_17765  XTP/dITP diphosphatase [KO:K01519] [EC:3.6.1.66]
F0T03_16625  xanthine phosphoribosyltransferase [KO:K00769] [EC:2.4.2.22]
F0T03_05875  guaA; glutamine-hydrolyzing GMP synthase [KO:K01951] [EC:6.3.5.2]
F0T03_04030  GMP reductase [KO:K00364] [EC:1.7.1.7]
F0T03_00250  guanylate kinase [KO:K00942] [EC:2.7.4.8]
F0T03_05150  nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
F0T03_07845  nrdA; ribonucleoside-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
F0T03_05145  nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
F0T03_07840  nrdB; ribonucleotide-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
F0T03_02960  nrdD; anaerobic ribonucleoside-triphosphate reductase [KO:K21636] [EC:1.1.98.6]
F0T03_04280  dGTPase [KO:K01129] [EC:3.1.5.1]
F0T03_07635  5'-deoxynucleotidase [KO:K08722] [EC:3.1.3.89]
F0T03_06495  HD family hydrolase [KO:K06952] [EC:3.1.3.89]
F0T03_12825  HD family hydrolase [KO:K06952] [EC:3.1.3.89]
F0T03_00240  spoT; bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase [KO:K01139] [EC:2.7.6.5 3.1.7.2]
F0T03_06045  ppx; exopolyphosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
F0T03_00850  ppx; exopolyphosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
F0T03_04300  relA; GTP diphosphokinase [KO:K00951] [EC:2.7.6.5]
F0T03_00975  class I adenylate cyclase [KO:K05851] [EC:4.6.1.1]
F0T03_15000  class IV adenylate cyclase [KO:K05873] [EC:4.6.1.1]
F0T03_15410  3',5'-cyclic-nucleotide phosphodiesterase [KO:K01120] [EC:3.1.4.17]
F0T03_02480  adenylosuccinate synthase [KO:K01939] [EC:6.3.4.4]
F0T03_10960  adenosine deaminase [KO:K01488] [EC:3.5.4.4]
F0T03_10790  AMP nucleosidase [KO:K01241] [EC:3.2.2.4]
F0T03_17095  DUF3412 domain-containing protein [KO:K06966] [EC:3.2.2.10 3.2.2.-]
F0T03_15320  bifunctional metallophosphatase/5'-nucleotidase [KO:K01119] [EC:3.1.4.16 3.1.3.6]
F0T03_02565  bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase [KO:K01119] [EC:3.1.4.16 3.1.3.6]
F0T03_16065  adenylate kinase [KO:K00939] [EC:2.7.4.3]
F0T03_04305  mazG; nucleoside triphosphate pyrophosphohydrolase [KO:K04765] [EC:3.6.1.9]
F0T03_18735  cpdA; 3',5'-cyclic-AMP phosphodiesterase [KO:K03651] [EC:3.1.4.53]
F0T03_03740  apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [KO:K01525] [EC:3.6.1.41]
F0T03_04375  cysC; adenylyl-sulfate kinase [KO:K00860] [EC:2.7.1.25]
F0T03_04370  cysN; sulfate adenylyltransferase subunit CysN [KO:K00956] [EC:2.7.7.4]
F0T03_04365  cysD; sulfate adenylyltransferase subunit CysD [KO:K00957] [EC:2.7.7.4]
F0T03_16775  alanine--glyoxylate aminotransferase family protein [KO:K00839] [EC:2.6.1.112]
F0T03_05280  urease subunit alpha [KO:K01428] [EC:3.5.1.5]
F0T03_05275  urease subunit beta [KO:K01429] [EC:3.5.1.5]
F0T03_05270  urease subunit gamma [KO:K01430] [EC:3.5.1.5]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
yca00030  Pentose phosphate pathway
yca00220  Arginine biosynthesis
yca00250  Alanine, aspartate and glutamate metabolism
yca00260  Glycine, serine and threonine metabolism
yca00340  Histidine metabolism
yca00630  Glyoxylate and dicarboxylate metabolism
yca00730  Thiamine metabolism
yca00740  Riboflavin metabolism
yca00790  Folate biosynthesis
KO pathway
ko00230   
LinkDB

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