KEGG   PATHWAY: yep00230
Entry
yep00230                    Pathway                                
Name
Purine metabolism - Yersinia enterocolitica subsp. palearctica 105.5R(r) (serotype:O:9)
Class
Metabolism; Nucleotide metabolism
Pathway map
yep00230  Purine metabolism
yep00230

Module
yep_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:yep00230]
yep_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:yep00230]
yep_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:yep00230]
yep_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:yep00230]
yep_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:yep00230]
Other DBs
GO: 0006163 0042278
Organism
Yersinia enterocolitica subsp. palearctica 105.5R(r) (serotype:O:9) [GN:yep]
Gene
YE105_C3362  ADP-ribose pyrophosphatase NudF [KO:K01515] [EC:3.6.1.13 3.6.1.-]
YE105_C3697  ADP-ribose diphosphatase NudE [KO:K08312] [EC:3.6.1.-]
YE105_C0586  phosphopentomutase [KO:K01839] [EC:5.4.2.7]
YE105_C1157  putative mutase [KO:K01839] [EC:5.4.2.7]
YE105_C1269  phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
YE105_C1825  ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
YE105_C2791  amidophosphoribosyltransferase [KO:K00764] [EC:2.4.2.14]
YE105_C0303  phosphoribosylamine--glycine ligase [KO:K01945] [EC:6.3.4.13]
YE105_C2967  phosphoribosylglycinamide formyltransferase [KO:K11175] [EC:2.1.2.2]
YE105_C2386  phosphoribosylglycinamide formyltransferase 2 [KO:K08289] [EC:6.3.1.21]
YE105_C3058  phosphoribosylformylglycinamidine synthase [KO:K01952] [EC:6.3.5.3]
YE105_C2966  phosphoribosylaminoimidazole synthetase [KO:K01933] [EC:6.3.3.1]
YE105_C1199  phosphoribosylaminoimidazole carboxylase ATPase subunit [KO:K01589] [EC:6.3.4.18]
YE105_C1200  phosphoribosylaminoimidazole carboxylase catalytic subunit PurE [KO:K01588] [EC:5.4.99.18]
YE105_C2955  phosphoribosylaminoimidazole-succinocarboxamide synthase [KO:K01923] [EC:6.3.2.6]
YE105_C2450  adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
YE105_C0304  bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase [KO:K00602] [EC:2.1.2.3 3.5.4.10]
YE105_C1168  adenine phosphoribosyltransferase [KO:K00759] [EC:2.4.2.7]
YE105_C1187  bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor [KO:K11751] [EC:3.1.3.5 3.6.1.45]
YE105_C0738  stationary phase survival protein SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
YE105_C1255  UMP phosphatase [KO:K02566] [EC:3.1.3.5]
YE105_C3699  hypothetical protein [KO:K20881] [EC:3.1.3.-]
YE105_C1184  inosine-guanosine kinase [KO:K00892] [EC:2.7.1.73]
YE105_C0587  purine nucleoside phosphorylase [KO:K03784] [EC:2.4.2.1]
YE105_C1080  hypothetical protein [KO:K09913] [EC:2.4.2.1 2.4.2.2]
YE105_C0658  hypothetical protein [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
YE105_C0828  hypoxanthine phosphoribosyltransferase [KO:K00760] [EC:2.4.2.8]
YE105_C3008  inosine 5'-monophosphate dehydrogenase [KO:K00088] [EC:1.1.1.205]
YE105_C3020  nucleoside diphosphate kinase [KO:K00940] [EC:2.7.4.6]
YE105_C0602  NTPase [KO:K01529] [EC:3.6.1.73]
YE105_C3195  putative deoxyribonucleotide triphosphate pyrophosphatase [KO:K01519] [EC:3.6.1.66]
YE105_C1059  xanthine-guanine phosphoribosyltransferase [KO:K00769] [EC:2.4.2.22]
YE105_C3007  GMP synthase [KO:K01951] [EC:6.3.5.2]
YE105_C0804  guanosine 5'-monophosphate oxidoreductase [KO:K00364] [EC:1.7.1.7]
YE105_C0048  guanylate kinase [KO:K00942] [EC:2.7.4.8]
YE105_C3151  ribonucleotide-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
YE105_C2726  ribonucleotide-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
YE105_C3152  ribonucleotide-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
YE105_C2727  ribonucleotide-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
YE105_C0498  anaerobic ribonucleoside triphosphate reductase [KO:K21636] [EC:1.1.98.6]
YE105_C0855  deoxyguanosinetriphosphate triphosphohydrolase [KO:K01129] [EC:3.1.5.1]
YE105_C2770  hypothetical protein [KO:K08722] [EC:3.1.3.89]
YE105_C0046  bifunctional (p)ppGpp synthetase II/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase [KO:K01139] [EC:2.7.6.5 3.1.7.2]
YE105_C2975  exopolyphosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
YE105_C0168  guanosine pentaphosphate phosphohydrolase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
YE105_C0859  GDP/GTP pyrophosphokinase [KO:K00951] [EC:2.7.6.5]
YE105_C0189  adenylate cyclase [KO:K05851] [EC:4.6.1.1]
YE105_C1396  adenylate cyclase 2 [KO:K05873] [EC:4.6.1.1]
YE105_C1283  putative 3',5'-cyclic-nucleotide phosphodiesterase [KO:K01120] [EC:3.1.4.17]
YE105_C0403  adenylosuccinate synthetase [KO:K01939] [EC:6.3.4.4]
YE105_C2199  adenosine deaminase [KO:K01488] [EC:3.5.4.4]
YE105_C2129  AMP nucleosidase [KO:K01241] [EC:3.2.2.4]
YE105_C0960  hypothetical protein [KO:K06966] [EC:3.2.2.10 3.2.2.-]
YE105_C0419  bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein [KO:K01119] [EC:3.1.4.16 3.1.3.6]
YE105_C1173  adenylate kinase [KO:K00939] [EC:2.7.4.3]
YE105_C0860  nucleoside triphosphate pyrophosphohydrolase [KO:K04765] [EC:3.6.1.9]
YE105_C3360  cyclic 3',5'-adenosine monophosphate phosphodiesterase [KO:K03651] [EC:3.1.4.53]
YE105_C0632  diadenosine tetraphosphatase [KO:K01525] [EC:3.6.1.41]
YE105_C0744  adenylylsulfate kinase [KO:K00860] [EC:2.7.1.25]
YE105_C0745  sulfate adenylyltransferase subunit 1 [KO:K00956] [EC:2.7.7.4]
YE105_C0746  sulfate adenylyltransferase subunit 2 [KO:K00957] [EC:2.7.7.4]
YE105_C1027  Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase-like deacylases [KO:K02083] [EC:3.5.3.9]
YE105_C1026  Aminotransferase class V [KO:K00839] [EC:2.6.1.112]
YE105_C3129  urease subunit alpha [KO:K01428] [EC:3.5.1.5]
YE105_C3130  urease subunit beta [KO:K01429] [EC:3.5.1.5]
YE105_C3131  urease subunit gamma [KO:K01430] [EC:3.5.1.5]
YE105_C1019  Amidohydrolase, AtzE family [KO:K22601] [EC:2.1.3.5]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
yep00030  Pentose phosphate pathway
yep00220  Arginine biosynthesis
yep00250  Alanine, aspartate and glutamate metabolism
yep00260  Glycine, serine and threonine metabolism
yep00340  Histidine metabolism
yep00630  Glyoxylate and dicarboxylate metabolism
yep00730  Thiamine metabolism
yep00740  Riboflavin metabolism
yep00790  Folate biosynthesis
KO pathway
ko00230   
LinkDB

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